Gvermi7668.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7668.t1
Unique NameGvermi7668.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length228
Homology
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BLAST of Gvermi7668.t1 vs. uniprot
Match: A0A2V3ID28_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID28_9FLOR)

HSP 1 Score: 299 bits (766), Expect = 1.450e-98
Identity = 148/216 (68.52%), Postives = 180/216 (83.33%), Query Frame = 0 
Query:   10 VILFLILEVNYSTFSFSTTTKNKIIEKCVSVVPSLETGFEKHQFSPEARTAVGSCLSVDGDEVSIRLGNFSLESKTMRVSCGEKVYFKFKLNDTRELSTANSEPFCMLTEFGDECVRVKFGD-KEDENVMWMTPVFDKYDIDDEKREFTKTEIMFPFRNHWQFFAKRMLRNENFLSVFFRIDVLLDAVNETCVFEEDGATATVIPTGIFVVLIACW 224
            +ILFL LEVNYSTF+F TTTKNK+I+ CVSV PS++T FEKHQFS EARTAV SCLSV+GDEVSIR+GNFSLES+ MRVSC ++VYFKFK+ND  EL+TA SE  C+  +F D CVR K GD K++ENV+W+T ++D+  IDDEK  FTKTE++F FR+H QFFA+RM+RNE   +VFFR DVLLDAVN+TCVFEEDG +ATVIPT +FVVL+  W
Sbjct:   65 LILFLTLEVNYSTFAFPTTTKNKVIKNCVSVRPSVQTRFEKHQFSAEARTAVASCLSVEGDEVSIRIGNFSLESRNMRVSCSKEVYFKFKINDEHELTTAKSELSCISKDFEDVCVRAKLGDSKDNENVLWLTYIYDELSIDDEKLLFTKTEVLFSFRDHLQFFARRMVRNEGAHNVFFRNDVLLDAVNDTCVFEEDGVSATVIPTPVFVVLVTSW 280
The following BLAST results are available for this feature:
BLAST of Gvermi7668.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ID28_9FLOR1.450e-9868.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1685345..1686178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7668.t1Gvermi7668.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1685345..1686178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7668.t1 ID=Gvermi7668.t1|Name=Gvermi7668.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=228bp
MQPASMPSNVILFLILEVNYSTFSFSTTTKNKIIEKCVSVVPSLETGFEK
HQFSPEARTAVGSCLSVDGDEVSIRLGNFSLESKTMRVSCGEKVYFKFKL
NDTRELSTANSEPFCMLTEFGDECVRVKFGDKEDENVMWMTPVFDKYDID
DEKREFTKTEIMFPFRNHWQFFAKRMLRNENFLSVFFRIDVLLDAVNETC
VFEEDGATATVIPTGIFVVLIACWTRF*
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