Gvermi7654.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7654.t1
Unique NameGvermi7654.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length274
Homology
BLAST of Gvermi7654.t1 vs. uniprot
Match: A0A1X6NNP6_PORUM (G domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNP6_PORUM)

HSP 1 Score: 72.0 bits (175), Expect = 3.720e-11
Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 0
Query:   43 EHIIFAGLPGSGVSYIVNAIVGNAVFESGTKFGGDEAPTALTTKRVKCTTYSRAERLGDPRQLEKAAAEIASVLEKGTNVKLIFVIQLEAGRLLSPDVAVMAHILNTVRERHGDPSNRFSIIVNKCSPEEFELF 176
            EH+I  G PG G S ++NA+ GNA                L +K +    YS    L D +  + AA  I + ++ G NVKLIFVI +EAGR+ + ++A M  +L  +         RFS+++NK S  E  L+
Sbjct:    2 EHMILVGDPGCGKSTLLNALCGNA----------------LDSKVINGKRYSDTPGLDDTKHRKAAAVAIQNAVQWGGNVKLIFVITVEAGRIRASNLATMRIVLKALLAAGVVVDRRFSVLINKMSAGELRLW 119          
BLAST of Gvermi7654.t1 vs. uniprot
Match: A0A7S0GQY3_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GQY3_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 3.400e-8
Identity = 41/135 (30.37%), Postives = 67/135 (49.63%), Query Frame = 0
Query:   45 IIFAGLPGSGVSYIVNAIVGNAVFESGTKFGGD-----EAPTALTTKRVKCTTYSRAERLGDPRQLEKAAAEIASVLEKGTNVKLIFVIQLEAGRLLSPDVAVMAHILNTVRERHGDPSNRFSIIVNKCSPEEFE 174
            I+  G PG+G S + N I+G  V ES   F G      + P A+    +K         L D ++ E AA +I   L+  T  K+IF+I L AGR+   D+A +  ++  ++        ++ I+VNK S ++F+
Sbjct:   22 ILLIGNPGTGKSSLTNTILGKVVTESNISFDGSGVTTKKIPIAIEEGELKGHEIVDTPGLDDFKKREIAARQIEQALKSNTKYKIIFIIDLRAGRIQPSDLATIDAVIKAIKTPF-----KYGIVVNKVSEKQFK 151          
BLAST of Gvermi7654.t1 vs. uniprot
Match: A0A662XC13_9STRA (G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XC13_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.990e-8
Identity = 49/170 (28.82%), Postives = 82/170 (48.24%), Query Frame = 0
Query:   46 IFAGLPGSGVSYIVNAIVGNAVFESGTKFGGDEAPTALTTKRVKC-TTYSRAERLGDPRQLEKAAAEIASVLEKGTNVKLIFVIQLEAGRLLSPDVAVMAHILNTVRERHGDPSNRFSIIVNKCSPEEFELFKSRRNR-----KKLESVLWTLIPTGFVRFVPWLHDAED 209
            +F G PG+G S ++N + G  +FESG  +GG    T    +R+     Y     L D +  E AA  I   L +    KL+F+++LE GR++S D+A +  +L ++ E    P   F+I+VN     ++     + +        L S+ +T   T  V F+P +   E+
Sbjct:   23 LFLGNPGTGKSTLINCLAGGVMFESGVSYGG--GLTKHFQQRLHDGVMYMDTPGLADRQIQETAARAITEALRQSGTYKLLFMVRLENGRVVSDDLATIETVLTSI-EMVDVP---FTIVVNNVKKRQYATMMEKGSEYLKVVTLLNSIKYT---TPHVVFIPMMSSLEE 183          
The following BLAST results are available for this feature:
BLAST of Gvermi7654.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1X6NNP6_PORUM3.720e-1134.33G domain-containing protein n=1 Tax=Porphyra umbil... [more]
A0A7S0GQY3_9EUKA3.400e-830.37Hypothetical protein n=2 Tax=Amorphochlora amoebif... [more]
A0A662XC13_9STRA7.990e-828.82G domain-containing protein n=1 Tax=Nothophytophth... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1391107..1391928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7654.t1Gvermi7654.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1391107..1391928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7654.t1 ID=Gvermi7654.t1|Name=Gvermi7654.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=274bp
MSFFARPLVFHWDDCGSLKPPLHRTHPVYSAVNPTLITMVRREHIIFAGL
PGSGVSYIVNAIVGNAVFESGTKFGGDEAPTALTTKRVKCTTYSRAERLG
DPRQLEKAAAEIASVLEKGTNVKLIFVIQLEAGRLLSPDVAVMAHILNTV
RERHGDPSNRFSIIVNKCSPEEFELFKSRRNRKKLESVLWTLIPTGFVRF
VPWLHDAEDTGQVQFNHQRSVLHGVVRNTPLLAHADAKHVRKHCNPRRCS
LNSAQLASQQRARCADFRTKEVH*
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