Gvermi7647.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7647.t2
Unique NameGvermi7647.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length359
Homology
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BLAST of Gvermi7647.t2 vs. uniprot
Match: A0A2V3IQG3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQG3_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 2.700e-47
Identity = 115/337 (34.12%), Postives = 177/337 (52.52%), Query Frame = 0 
Query:    1 MFIPVRAQIVSLSITFAFVTAEIGALLAAKTINRVFETSVLKKSRRVFLYQHCRRLRLISAFVLLSFVGLEAFTSSVTSTEFRDVVLTENCKSMGFRDENNSKVDGNDIEVDLITFRCLQVNGTSFKLHSGRKSLDTSESVCDDTVMFEFERSSRVSRSLSEVKRMCE-VSKLPELCPNEEDQVAFDVELCIHYLYEDNQLFLSANLFQKDSLDQAGDFLVPKVHANLSSVMVSNIVSIALQENLKSNLQDEVHFLRKIFTTTKQTRCEFVKDQREGTIVPTSVLVTVVGLCTLFIVTSALLMIFVHRHPMVNLSDPYWWAHNGDVPKTESKRSLTV 336
            MFIP+RAQIVSL +T  FV  E+  L  AKTI  +FET  L +   + LYQHC R R+ +A VLLSF+ LE  TS++T T FRD  +  +C  +    + +     +D   + I +RCL  N   F+   G  SL+ S+  C+D   + +  S RV RS S     C+ +S L     N E +     E C+ +  E + L++SA  F +   ++ G F+V KVH +++   V  +V   L   +K +  +E+H    +FT   +T+C F   + EG  VP  +LVTV  L  L I+ +    +   +  ++ LSDP++WA+      T  K+++ V
Sbjct:    1 MFIPIRAQIVSLVVTLVFVATELCVLWVAKTITVLFETQKLCRKVTIGLYQHCLRRRVTAAVVLLSFLALETLTSTLTQTSFRDEKVQRDCLKLVPITQTSDPNVFHDQRSESILYRCLNFNRDIFEQRLGGVSLEPSDVTCEDQPYYSYNNSQRVRRSTSSATMTCKNISSL-----NLERETVVH-EWCVFHEVERDTLYMSAQPFPESEAEEEGSFIVTKVHTDITP-FVPKVVDRYLHFFVKDSETEELHLRGVMFTDLVETQCSFSSGKTEGVTVPDFILVTVAALWLLAILGAIFTKLLTRKKTLIYLSDPFFWANISLEKVTIPKKNIRV 330
The following BLAST results are available for this feature:
BLAST of Gvermi7647.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQG3_9FLOR2.700e-4734.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 283..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 306..358
NoneNo IPR availableTMHMMTMhelixcoord: 283..305
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1203159..1204235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7647.t2Gvermi7647.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1203159..1204235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7647.t2 ID=Gvermi7647.t2|Name=Gvermi7647.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=359bp
MFIPVRAQIVSLSITFAFVTAEIGALLAAKTINRVFETSVLKKSRRVFLY
QHCRRLRLISAFVLLSFVGLEAFTSSVTSTEFRDVVLTENCKSMGFRDEN
NSKVDGNDIEVDLITFRCLQVNGTSFKLHSGRKSLDTSESVCDDTVMFEF
ERSSRVSRSLSEVKRMCEVSKLPELCPNEEDQVAFDVELCIHYLYEDNQL
FLSANLFQKDSLDQAGDFLVPKVHANLSSVMVSNIVSIALQENLKSNLQD
EVHFLRKIFTTTKQTRCEFVKDQREGTIVPTSVLVTVVGLCTLFIVTSAL
LMIFVHRHPMVNLSDPYWWAHNGDVPKTESKRSLTVRIVDEVPIVSFSDF
TPSVADGA*
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