Gvermi7620.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7620.t1
Unique NameGvermi7620.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length137
Homology
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: A0A2V3INU8_9FLOR (Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2V3INU8_9FLOR)

HSP 1 Score: 251 bits (642), Expect = 2.400e-84
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQ SAV+ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: A0A6J0UZS0_9SAUR (Histone H3 n=35 Tax=Eukaryota TaxID=2759 RepID=A0A6J0UZS0_9SAUR)

HSP 1 Score: 247 bits (631), Expect = 1.140e-82
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+KSDLRFQ SAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: G9I117_9CHLO (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=G9I117_9CHLO)

HSP 1 Score: 247 bits (630), Expect = 1.620e-82
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQDYK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: R7QCI8_CHOCR (Histone H3 n=3 Tax=Eukaryota TaxID=2759 RepID=R7QCI8_CHOCR)

HSP 1 Score: 247 bits (630), Expect = 1.620e-82
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPA+GGVKKPHR+RPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQD+KSDLRFQ SAV+ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: H32_HUMAN (Histone H3.2 n=21881 Tax=cellular organisms TaxID=131567 RepID=H32_HUMAN)

HSP 1 Score: 246 bits (628), Expect = 3.280e-82
Identity = 129/136 (94.85%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: A0A8D1X0H7_PIG (Histone H3 n=5 Tax=Eukaryota TaxID=2759 RepID=A0A8D1X0H7_PIG)

HSP 1 Score: 246 bits (628), Expect = 3.280e-82
Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: A0A7R9BXI0_9CRUS (Histone H3 n=2 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BXI0_9CRUS)

HSP 1 Score: 246 bits (628), Expect = 3.280e-82
Identity = 129/136 (94.85%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+K+DLRFQGSAVMALQEASEAYLV LFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVMALQEASEAYLVSLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: A0A7L0ZNQ9_9PASS (Histone H3 (Fragment) n=6 Tax=Eukaryota TaxID=2759 RepID=A0A7L0ZNQ9_9PASS)

HSP 1 Score: 246 bits (628), Expect = 3.280e-82
Identity = 129/136 (94.85%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQNSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: H2Y963_CIOSA (Histone H3 n=4 Tax=Chordata TaxID=7711 RepID=H2Y963_CIOSA)

HSP 1 Score: 246 bits (628), Expect = 3.390e-82
Identity = 129/136 (94.85%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    2 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 137
[Close]
BLAST of Gvermi7620.t1 vs. uniprot
Match: A0A674HWZ8_TERCA (Histone H3 n=4 Tax=Bilateria TaxID=33213 RepID=A0A674HWZ8_TERCA)

HSP 1 Score: 246 bits (628), Expect = 3.390e-82
Identity = 129/136 (94.85%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    2 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 137
The following BLAST results are available for this feature:
BLAST of Gvermi7620.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INU8_9FLOR2.400e-8498.53Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2... [more]
A0A6J0UZS0_9SAUR1.140e-8295.59Histone H3 n=35 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
G9I117_9CHLO1.620e-8295.59Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=G9I... [more]
R7QCI8_CHOCR1.620e-8295.59Histone H3 n=3 Tax=Eukaryota TaxID=2759 RepID=R7QC... [more]
H32_HUMAN3.280e-8294.85Histone H3.2 n=21881 Tax=cellular organisms TaxID=... [more]
A0A8D1X0H7_PIG3.280e-8295.59Histone H3 n=5 Tax=Eukaryota TaxID=2759 RepID=A0A8... [more]
A0A7R9BXI0_9CRUS3.280e-8294.85Histone H3 n=2 Tax=Notodromas monacha TaxID=399045... [more]
A0A7L0ZNQ9_9PASS3.280e-8294.85Histone H3 (Fragment) n=6 Tax=Eukaryota TaxID=2759... [more]
H2Y963_CIOSA3.390e-8294.85Histone H3 n=4 Tax=Chordata TaxID=7711 RepID=H2Y96... [more]
A0A674HWZ8_TERCA3.390e-8294.85Histone H3 n=4 Tax=Bilateria TaxID=33213 RepID=A0A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 34..55
score: 85.28
coord: 98..114
score: 96.93
coord: 114..135
score: 91.21
coord: 80..98
score: 78.38
coord: 3..17
score: 97.1
coord: 17..31
score: 92.32
coord: 58..75
score: 97.46
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 34..136
e-value: 6.1E-72
score: 255.0
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..136
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 67..75
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..132
e-value: 2.7E-51
score: 173.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..136
e-value: 1.2E-73
score: 247.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availablePANTHERPTHR11426:SF198SUBFAMILY NOT NAMEDcoord: 1..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:589843..590253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7620.t1Gvermi7620.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 589843..590253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7620.t1 ID=Gvermi7620.t1|Name=Gvermi7620.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=137bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR
EIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVMALQEASEAY
LVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold