Gvermi7618.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7618.t1
Unique NameGvermi7618.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length411
Homology
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BLAST of Gvermi7618.t1 vs. uniprot
Match: A0A2V3IR85_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR85_9FLOR)

HSP 1 Score: 275 bits (704), Expect = 3.400e-86
Identity = 149/356 (41.85%), Postives = 196/356 (55.06%), Query Frame = 0 
Query:  104 LGLLIVIAHSQRLQIFKASVPGPMSGWEIGPELSTEVTFCPEDLPSPFTIVCIPPNDQETSFAVFMINGIKVRTEKQLPYVLTGDTYANGANAWIPESQVNQIECRL--------TPTTAASTEQPPNSQEGLNASEPPQNY-----------------------------------------CIYIPAKSYESKTGAWEDAEQDEAVWYKRDDNTRKTDRAGLATMRFSFTPAYTARYALTLDMQTSHRTEHNDVWVELSGVPFKLVSKAGTTELGRRGLNKAYHNKNGRARVVFTTDFDPHVFSTESFLQAGDTYVVKIGGRSTKVAIYGIILFPCASYGCAPTQDWYRSANTC 410
            L LL+ +A+ Q L+I++ASVPG MS W+ GP L +E T CP+ +PSP T+VC+P  D+    A F I+G   RTE+ +PY L GDT+  GA  WI  ++V ++ C L        T T A      P S        P                                             CIYI A  Y  KTGAWE      A  YKR++ +   D+ G+AT+R++FTP  + RY LT+DM T H TEHNDVWVE++ VPF LV +   T  G  G+NKAYHNKNGR++ V+T DFD HVFST   L+AG  Y VK+GGRSTKV ++G+ILFPC+ + CA    W  + N+C
Sbjct:    7 LPLLLALANCQTLRIYQASVPGRMSNWQPGPLLQSESTLCPKHIPSPLTVVCLPGADKHVKSASFYIDGDFERTERVMPYTLKGDTFKAGARPWITRARVTKVSCVLSNGDSVASTITFACPDPSGPRSDVAPTTVPPTTTAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCIYIDATKYMEKTGAWELVSNGMA--YKRNNPSTGIDKPGVATLRYAFTPTESKRYTLTVDMTTDHGTEHNDVWVEIANVPFTLV-QGSKTRPGAAGMNKAYHNKNGRSKTVYTVDFDGHVFSTRDALEAGKRYEVKVGGRSTKVVLHGVILFPCSDFSCAHGGKWNAALNSC 359
The following BLAST results are available for this feature:
BLAST of Gvermi7618.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR85_9FLOR3.400e-8641.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..88
NoneNo IPR availableTMHMMTMhelixcoord: 94..111
NoneNo IPR availableTMHMMTMhelixcoord: 68..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:577790..583158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7618.t1Gvermi7618.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 577790..583158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7618.t1 ID=Gvermi7618.t1|Name=Gvermi7618.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=411bp
MSLLLVIDNTALSQVRVEWASNEDEHDPMDRSPGRRTPHAGDNIYYDPWT
WEKITPQEAVILRDAMRVILRVIRLISSFIHSLLLSFYKSLDTLVMLVLF
SIFLGLLIVIAHSQRLQIFKASVPGPMSGWEIGPELSTEVTFCPEDLPSP
FTIVCIPPNDQETSFAVFMINGIKVRTEKQLPYVLTGDTYANGANAWIPE
SQVNQIECRLTPTTAASTEQPPNSQEGLNASEPPQNYCIYIPAKSYESKT
GAWEDAEQDEAVWYKRDDNTRKTDRAGLATMRFSFTPAYTARYALTLDMQ
TSHRTEHNDVWVELSGVPFKLVSKAGTTELGRRGLNKAYHNKNGRARVVF
TTDFDPHVFSTESFLQAGDTYVVKIGGRSTKVAIYGIILFPCASYGCAPT
QDWYRSANTC*
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