Gvermi7617.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7617.t1
Unique NameGvermi7617.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length402
Homology
BLAST of Gvermi7617.t1 vs. uniprot
Match: A0A2V3IME3_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 340 bits (871), Expect = 1.440e-110
Identity = 179/406 (44.09%), Postives = 260/406 (64.04%), Query Frame = 0
Query:    2 RTYPFVSCQPQCAPYSLGVHQKCQTKQQFGCLYRKCSAHNFECRL----ESQSSCPNGEAQVRTVSLKPNFPVEFDLAVNLRGFDIDIVLLLDASESTRPRLNAVKNELSSFVRQLNGVAHVGVAIYGGEESFDEKGMQILSPAQENVQAALNALDNLPVFPDGPRTTLSALFSVQTAGQAISLRGARTIIALIGDTPGREPDCSPFQFDRDILSRSLYDHTSGTSVMPVTIGGPGLDAALSPIAICENG-YGPPQPQGVPAGQASKLAEQTQGAVVSSITASALLQTVDQIRRKPNRVHQSAAGAQISISTASVVPVTGPYYPTLEPI-NGCGDKVIVTTTGIPNFVSEPAQIVGRVKLDLKAGICQSGPFTCTIRVLDHVRGNESMSHWTRPITYYKKISVHGC 401
              +PFV+C+ +C  Y       C  K QFGC Y+KCS+ ++ C L    E  + CPNGE  V++++L  +F V+F+LA+NLRG+  D+VLL+D S STRP L A+KNELSSFVRQLNG A VGVA+YG EES+DE G+ +LS   + V  AL AL+++P   DG RTT++AL ++ ++   ++LRG + II LIGD PGREPDC    ++RD++  S       ++++ V++G  GL++AL   + C NG Y  P P  +  GQA  +  +T G VV  +TA++LL  VD +RR+P   +    G+ I +S+AS     GPY P ++   NGCG+KV + T+G+P F+S PA++   V + L  G+C  GPFTC IRV++  RG E  S W+ P  +++ I +HGC
Sbjct:   32 NVFPFVTCESKCFSYYPNFGSGCSQKAQFGCEYKKCSSSSYRCALNPAVEKDNPCPNGEVPVKSINLT-SF-VDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITALKTLSSSVAGLNLRGNKRIIVLIGDRPGREPDCRN-GYNRDMVLPS-------STMISVSLGSDGLNSALPAPSACMNGSYYDPSP--IAVGQARDIVNRTNGEVVEIVTAASLLWAVDTVRRRPVYWYNRPPGSNIRVSSASFPLYRGPYTPPVQRYSNGCGNKVYLRTSGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIRRGGEYPSSWSIPFEHFEVIKIHGC 425          
BLAST of Gvermi7617.t1 vs. uniprot
Match: A0A2V3IEV7_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 225 bits (574), Expect = 4.010e-67
Identity = 132/349 (37.82%), Postives = 193/349 (55.30%), Query Frame = 0
Query:   59 VRTVSLKPNFPVEFDLAVNLRGFDIDIVLLLDASESTRPRLNAVKNELSSFVRQLNGVAHVGVAIYGGEESFDEKGMQILSPAQENVQAALNALDNLPVFPDGPRTTLSALFSV---QTAGQAISLRGARTIIALIGDTPGREPDCSPFQFDRDILSRSLYDHTSGTSVMPVTIGGPGLDAALSPIAICENGYGPPQPQGVPAGQASKLAEQTQGAVVSSITASALLQTVDQIRRKP-NRVHQSAAGAQISISTASVVPVTGPYYPTLEPIN--GCGDKVIVTTTGIPNFVSEPAQIVGRVKLDLKAGICQSGPFTCTIRVLDHVRGNESMSHWTRPITYYKKISVHGC 401
            V  V+L+ +FP++  L +N+ G   DIV+L+DAS+STR +LN VK +L SFVR L  V +V VA YGGE    E G  +   A  +V  A  ALDN+P+  DGPRT+++A++S+   Q     + L   R II L+GDTPGREP+C        I S  +   +  T VM V +  PGL+AAL   A C  GY       +P GQ ++LA+ ++G ++S +T+S L +++ ++R    N +H   +   +   T +    T P       I   GC D+VI+  + IP+F   P Q+ G++ L L AGICQ GPF C + V + +    S SHW+ P  +   I V  C
Sbjct:    2 VNNVTLRHHFPIDISLDINVPGDTQDIVMLVDASQSTRAKLNNVKEQLKSFVRTLGDVGNVSVAFYGGESDMGETGYSVALKATSDVNRAAEALDNIPIVADGPRTSITAMWSIMQHQDGTIPLGLFANRRIIVLVGDTPGREPECR-----HGIKSDRMSFSSQRTRVMVVNLASPGLNAALPAPAAC--GY--ITSAAIPEGQGTRLADTSEGELISQVTSSKLRESILKLRMNAANGLHGKGSHISVLSKTYTYTEYTCPSSFCARTITTKGCDDRVIIRKSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKERLE-RFSYSHWSLPQRHTHLIGVKAC 340          
BLAST of Gvermi7617.t1 vs. uniprot
Match: A0A2V3IGT8_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT8_9FLOR)

HSP 1 Score: 204 bits (518), Expect = 1.070e-57
Identity = 138/389 (35.48%), Postives = 205/389 (52.70%), Query Frame = 0
Query:    4 YPFVSCQPQCAPYSLGVHQKCQTKQQFGCLYRKCSAHNFECRLESQSS--CPNGEAQVRTVSLKPNFPVEFDLAVNLRGFDIDIVLLLDASESTRPRLNAVKNELSSFVRQLNGVAHVGVAIYGGEESFDEKGMQILSPAQENVQAALNALDNLPVFPDGPRTT---LSALFSVQTAGQAISLRGART---IIALIGDTPGREPDCSPFQFDRDILSRSLYDHTSGTSVMPVTIGGPGLDAALSPIAICENGYGPPQPQGVPAGQASKLAEQTQGAVVSSITASALLQTVDQIRRKPNRVHQSAAGAQISISTASVVPVTGPYYPTLEPI---NGCGDKVIVTT-TGIPNFVSEPAQIVGRVKLDLKAGICQSGPFTCTIRVLDHVRGN 380
            +PFVSC   C  +S     KC  K QFGC  + C+ + F+C ++   S  CPN E  V  V+L P+ PVEF+LA NL  +  D++ L DAS STR  L+A+KN+L  F+R ++    VG+ +YG E+SF   G  +L     + + A+ AL N+P+ PDGPRT+   L+ L  ++T    I   G R+   I  LIGDTPGRE  C    F  DI    +        ++  +IG PGL+AA+S    C     P     + A QAS ++ +  G V++ +T   L  T  QIR  P R +    G  ++++  +     G Y+    PI   +GC ++VI++T    P  +  P + VG ++L L    C++G FTC + + D VR N
Sbjct:   28 FPFVSCGNTCGWHSYQSIWKCCRKAQFGCRLQWCTRNGFQCAVDPSISPVCPNNEIPVEEVTLIPHRPVEFNLAFNLSEYTRDVIFLFDASTSTRSSLDALKNDLIRFIRNVSSTYSVGIGLYGSEQSFGAAGYSVLQTVTPHSEEAVQALHNIPMLPDGPRTSMLALATLIGLRTVEGGIPNFGFRSQERIFLLIGDTPGREVPCDAPSFS-DIRHDIINRRGPSNIILTASIGSPGLNAAIS-APPCNYHTIPEALNPIQAEQASDISIRG-GQVMTPVTFDTLYTTYHQIRSYPPRGYFPNWGRAVTVTQNTTSRGFG-YFQMPVPIPQSDGCNERVILSTPVSWPVPLQFPTKEVGTIQLALAPWACRNGSFTCEVVIKD-VRRN 411          
The following BLAST results are available for this feature:
BLAST of Gvermi7617.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IME3_9FLOR1.440e-11044.09VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV7_9FLOR4.010e-6737.82VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGT8_9FLOR1.070e-5735.48VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 82..264
e-value: 3.0E-6
score: 36.8
IPR002035von Willebrand factor, type APFAMPF13519VWA_2coord: 85..193
e-value: 1.5E-6
score: 28.8
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 84..276
score: 11.291884
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 80..293
e-value: 3.4E-10
score: 42.1
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 82..289
NoneNo IPR availableCDDcd00198vWFAcoord: 83..249
e-value: 6.05313E-9
score: 52.9534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:550983..552188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7617.t1Gvermi7617.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 550983..552188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7617.t1 ID=Gvermi7617.t1|Name=Gvermi7617.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=402bp
MRTYPFVSCQPQCAPYSLGVHQKCQTKQQFGCLYRKCSAHNFECRLESQS
SCPNGEAQVRTVSLKPNFPVEFDLAVNLRGFDIDIVLLLDASESTRPRLN
AVKNELSSFVRQLNGVAHVGVAIYGGEESFDEKGMQILSPAQENVQAALN
ALDNLPVFPDGPRTTLSALFSVQTAGQAISLRGARTIIALIGDTPGREPD
CSPFQFDRDILSRSLYDHTSGTSVMPVTIGGPGLDAALSPIAICENGYGP
PQPQGVPAGQASKLAEQTQGAVVSSITASALLQTVDQIRRKPNRVHQSAA
GAQISISTASVVPVTGPYYPTLEPINGCGDKVIVTTTGIPNFVSEPAQIV
GRVKLDLKAGICQSGPFTCTIRVLDHVRGNESMSHWTRPITYYKKISVHG
C*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf