Gvermi7615.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7615.t1
Unique NameGvermi7615.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length235
Homology
BLAST of Gvermi7615.t1 vs. uniprot
Match: A0A2V3IUY8_9FLOR (Putative peroxiredoxin bcp n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUY8_9FLOR)

HSP 1 Score: 273 bits (699), Expect = 4.840e-90
Identity = 131/220 (59.55%), Postives = 165/220 (75.00%), Query Frame = 0
Query:   12 LPPLAPVLNAKKNQLNETLSPEFLAEIERTSVELQKLFTPTPLRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNIVE 231
            LP L+  L AKK Q+ + +  E +  +E TS  L K++TP PL   D+AP FTL +A G P+ LSDLL  H AVV+TWYRG WCPYCN  L+SLI AN+HIEALGAKLV ++ +TPDES  +IE+  +PFH LSDDGL VAEKYGIA++VT+ IK+LY  FGVDLD +NGN+  RK RLP+PA+ VLDK G V F YA++DYTTRAEP  I++ I++IVE
Sbjct:    6 LPKLSTALLAKKKQVLDNMPEETVKGLEETSAGLAKVYTPNPLAKGDIAPDFTLKNASGEPIKLSDLLRDHSAVVLTWYRGGWCPYCNVALESLIAANEHIEALGAKLVALTPETPDESLSVIEKTHIPFHVLSDDGLFVAEKYGIAFTVTEEIKALYRTFGVDLDHMNGNDGNRKARLPLPASLVLDKEGKVEFVYANLDYTTRAEPSDIIDAIKSIVE 225          
BLAST of Gvermi7615.t1 vs. uniprot
Match: R7QJ27_CHOCR (Thioredoxin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ27_CHOCR)

HSP 1 Score: 198 bits (503), Expect = 1.880e-59
Identity = 100/216 (46.30%), Postives = 134/216 (62.04%), Query Frame = 0
Query:   14 PLAPVLNAKKNQLNETLSPEFLAEIERTSVELQKLFTPTPLRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNI 229
            PLA  L A +        PE ++ I+ +S  L   FTPTP  +      F+L +A G  VSL  LL S  AVV+T+YRG WCPYCN  L +L  + D I+ALGA LV +S +TPDES    E+  +P+  LSD+GL VA K G+A++V D +K +Y  FG+ LD +NGN+  RK  LP PAT VLDK G V + +AD++Y+ RAEP  I+  I+ I
Sbjct:   74 PLATELAAFEQSFRSKTPPEMISAIDASSAALAARFTPTPPSLGTKVESFSLPNAKGETVSLDSLLSSSTAVVLTYYRGSWCPYCNLALRALAKSVDEIKALGATLVALSPETPDESLTTKEKNEIPYEVLSDEGLVVAGKLGVAFTVGDDVKEIYGGFGIHLDEMNGNKGVRKAMLPAPATIVLDKEGKVIYTFADVNYSKRAEPADIIAAIKKI 289          
BLAST of Gvermi7615.t1 vs. uniprot
Match: K9RBE6_9CYAN (Peroxiredoxin n=1 Tax=Rivularia sp. PCC 7116 TaxID=373994 RepID=K9RBE6_9CYAN)

HSP 1 Score: 162 bits (409), Expect = 3.340e-46
Identity = 87/216 (40.28%), Postives = 126/216 (58.33%), Query Frame = 0
Query:   15 LAPVLNAKKNQLNETLSPEFLAEIERTSVELQKLFTPTPL-RVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNI 229
            L   LN  + +  E +  E  A +ER + EL + F    L ++ D+AP FTL DA+GN +SL + L +  AV++T+YRG WCPYCN  L +       IE LGA L+ +S QTPD S    E+  L F  LSD  LT A  YG+ + ++  +K+LY  +G+DL   NGN   +   LPVP TFV+D+ G +  +Y + DYT R EP++ +  +Q +
Sbjct:    3 LQTALNNFQAEFKEKVPAEAAATMERAANELLQEFEARNLIKIGDIAPDFTLADAVGNKISLKERL-TKGAVILTFYRGGWCPYCNLELRAYQQLLPEIERLGASLIAVSPQTPDASLSTAEKNDLEFDVLSDVDLTAARTYGLVFELSQELKALYQQWGIDLPKNNGNNEWK---LPVPGTFVIDQNGRIAASYINTDYTKRLEPKEAIAALQKL 214          
BLAST of Gvermi7615.t1 vs. uniprot
Match: A0A852ZUW2_9ACTN (Peroxiredoxin n=2 Tax=Allostreptomyces psammosilenae TaxID=1892865 RepID=A0A852ZUW2_9ACTN)

HSP 1 Score: 159 bits (403), Expect = 2.310e-45
Identity = 84/198 (42.42%), Postives = 120/198 (60.61%), Query Frame = 0
Query:   33 EFLAEIERTSVELQKL-FTPTPLRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNI 229
            E LA +ER + EL+        L V D AP F L DA G  V+L DLL +   VV+++YRG WCPYCN  L +L  + D     GA+LV IS Q PD+S  +IE   L F  LSD G  V+ ++G+A+ +TD + ++Y  FG++L+ +NG   +    LP+PAT++LD  G +R+A+ + DYT RAEP  IV  +  +
Sbjct:   21 EALAVMERAARELEASGLAKAALTVGDQAPRFALPDAHGTTVALDDLL-AQGPVVISFYRGAWCPYCNLELRALQQSLDDFHRHGARLVAISPQLPDQSLTLIERHELAFDVLSDVGSQVSREFGLAFDLTDELAAVYQSFGIELERVNGGHART---LPIPATYLLDHQGVIRWAHVNTDYTRRAEPADIVTALAEL 214          
BLAST of Gvermi7615.t1 vs. uniprot
Match: UPI00148A0032 (redoxin domain-containing protein n=1 Tax=Streptomyces sp. I05A-00742 TaxID=2732853 RepID=UPI00148A0032)

HSP 1 Score: 159 bits (402), Expect = 3.260e-45
Identity = 83/168 (49.40%), Postives = 109/168 (64.88%), Query Frame = 0
Query:   60 APLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAIN-GNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVI 226
            AP FTL  A G  V+L  LL +   VV+T+YRG WCPYCN  L +L    D I A GA+LV +S Q PDES  +IE+  L F  LSD G  VAE++GIA+ ++D +  LY+ FG DL  +N GN R     LP+PAT+V+D+TG +R+A+   DYT RAEP +IV  +
Sbjct:   49 APRFTLPSATGKDVALDSLL-ADGPVVLTFYRGAWCPYCNLALRALQQHQDAITARGARLVAVSPQIPDESLSLIEKEQLAFEVLSDGGSEVAERFGIAFDLSDELGDLYDRFGFDLQRVNSGNVRT----LPLPATYVIDRTGVIRWAFVTTDYTVRAEPSEIVAAL 211          
BLAST of Gvermi7615.t1 vs. uniprot
Match: UPI001C4046E6 (AhpC/TSA family protein n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C4046E6)

HSP 1 Score: 158 bits (400), Expect = 6.710e-45
Identity = 85/212 (40.09%), Postives = 122/212 (57.55%), Query Frame = 0
Query:   19 LNAKKNQLNETLSPEFLAEIERTSVEL-QKLFTPTPLRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNI 229
            LN     +   +  E L+ + +   EL Q       L+V    P FTL +A G PV LS LL +   VV+++YRG WCP+CN  L +L  A   I+ALGA LV IS QTPD S   IE+  L F  LSD G TVA ++GI + + + ++ +Y +FG+DL   NG+       LP+PAT+V+   G V + + D DYT R EP Q++E ++++
Sbjct:    7 LNNVATHIKSQIPAEALSTMGQAMAELIQSGIVDRSLKVGATVPDFTLPNAAGTPVQLSTLL-AQGPVVISFYRGAWCPFCNLELHALQQALPEIQALGANLVAISPQTPDNSLTTIEKNSLTFEVLSDSGNTVARQFGIVFQLAESLRPIYANFGIDLPVFNGDTSFE---LPMPATYVIAPDGRVAYTFVDPDYTKRLEPAQVLEALRSL 214          
BLAST of Gvermi7615.t1 vs. uniprot
Match: B4VKQ6_9CYAN (Redoxin superfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VKQ6_9CYAN)

HSP 1 Score: 158 bits (399), Expect = 1.010e-44
Identity = 85/210 (40.48%), Postives = 125/210 (59.52%), Query Frame = 0
Query:   19 LNAKKNQLNETLSPEFLAEIERTSVELQKL-FTPTPLRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQ 227
            +N  + Q+   +S E  A +++   +L     T   L+V D AP F L +A+G  V L DLL S   VV+++YRG WCPYCN  L SL  +   I+ LGA LVTIS QTPD S   +E+  L F  LSD G  VA+ +G+ + + + ++ +Y DFG+DL A NG+       LP+PAT+V+ + GT+  A+ D DYT R +P +I+  ++
Sbjct:    7 INTLRQQIQAKMSEETKAVMDKAMQDLVNSGLTNQSLKVGDKAPNFALPNAVGKTVELQDLL-SRNPVVISFYRGGWCPYCNLELRSLQQSLAEIKKLGATLVTISPQTPDNSLSTVEKNELEFEVLSDAGNQVAKDFGLVFVLPEELRPIYQDFGIDLPAHNGDNTFE---LPIPATYVIAQNGTIIHAFVDPDYTKRLDPAEIITALK 212          
BLAST of Gvermi7615.t1 vs. uniprot
Match: UPI00048F8EED (AhpC/TSA family protein n=1 Tax=Nocardiopsis sp. CNT312 TaxID=1137268 RepID=UPI00048F8EED)

HSP 1 Score: 157 bits (398), Expect = 1.340e-44
Identity = 81/176 (46.02%), Postives = 110/176 (62.50%), Query Frame = 0
Query:   54 LRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNI 229
            L V   AP F+L  A G+ VSL+ LL +   VV+T+YRG WCPYCN  L SL   +D I A GA LV +S Q PDES  + E+  L F  LSD G   A +YG+A+ + D + ++Y+ FG DL  +N    +    LP+PAT+V+D+ GTVR+A+ D DYTTRAEP  I+  +  +
Sbjct:   44 LAVGAQAPPFSLPSATGHTVSLTSLL-AEGPVVLTFYRGAWCPYCNMALRSLQQHHDAITARGAHLVAVSPQIPDESLTLTEKHDLAFDVLSDIGSDTARQYGLAFDLPDDLAAVYDKFGFDLQRVNDGHPRT---LPLPATYVIDRNGTVRWAFTDTDYTTRAEPTDIIAALDTL 215          
BLAST of Gvermi7615.t1 vs. uniprot
Match: UPI001F2DF7DF (AhpC/TSA family protein n=1 Tax=Streptomyces sp. NRRL S-337 TaxID=1463900 RepID=UPI001F2DF7DF)

HSP 1 Score: 158 bits (399), Expect = 1.340e-44
Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 0
Query:   54 LRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNI 229
            L+  D APLFTL  A G   SL  LL S   VV+T+YRG WCPYCN  L +L      I A GA+LV +S Q PDES  + E+ GL F  LSD G   A++YG+A+ + D + ++Y+  G DL  +NG   +    LP+PAT+V+D+  T+R+A+ D DYT RAEP  I+  + ++
Sbjct:   56 LQAGDTAPLFTLPTATGETRSLDTLLSSGP-VVLTFYRGAWCPYCNIALRALQQHLPEITARGARLVAVSPQVPDESLSLTEKHGLTFDVLSDIGSDTAKRYGLAFDLPDDLAAVYDSLGFDLQRVNGGHSRT---LPLPATYVIDRDTTIRWAFVDTDYTARAEPSDILTALDHL 227          
BLAST of Gvermi7615.t1 vs. uniprot
Match: A0A544YUF6_9ACTN (AhpC/TSA family protein n=1 Tax=Microbispora hainanensis TaxID=568844 RepID=A0A544YUF6_9ACTN)

HSP 1 Score: 157 bits (397), Expect = 2.930e-44
Identity = 77/176 (43.75%), Postives = 113/176 (64.20%), Query Frame = 0
Query:   54 LRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNATLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLTVAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDKTGTVRFAYADIDYTTRAEPQQIVEVIQNI 229
            L V   AP F L  A G  V+L DLL +H  VV+ +YRG WCPYCN  L ++   +D I ALGA+LV +S Q PDES  + E+  L F  LSD G   A++YG+A+ ++  + ++Y+  G DL  +NG   +    LP+PAT+V+D+ GT+R+A+AD DYT RAEP+ ++  + ++
Sbjct:   43 LGVGARAPRFRLPSATGRTVALDDLL-AHGPVVLVFYRGTWCPYCNIALRAMQRHHDEIIALGARLVAVSPQIPDESLSLKEKHELDFEVLSDVGSDTAKQYGLAFDLSHELAAVYDTLGFDLQRVNGGHPRT---LPIPATYVIDRQGTIRWAFADADYTRRAEPEDVLRALADL 214          
The following BLAST results are available for this feature:
BLAST of Gvermi7615.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUY8_9FLOR4.840e-9059.55Putative peroxiredoxin bcp n=1 Tax=Gracilariopsis ... [more]
R7QJ27_CHOCR1.880e-5946.30Thioredoxin domain-containing protein n=1 Tax=Chon... [more]
K9RBE6_9CYAN3.340e-4640.28Peroxiredoxin n=1 Tax=Rivularia sp. PCC 7116 TaxID... [more]
A0A852ZUW2_9ACTN2.310e-4542.42Peroxiredoxin n=2 Tax=Allostreptomyces psammosilen... [more]
UPI00148A00323.260e-4549.40redoxin domain-containing protein n=1 Tax=Streptom... [more]
UPI001C4046E66.710e-4540.09AhpC/TSA family protein n=1 Tax=Anthocerotibacter ... [more]
B4VKQ6_9CYAN1.010e-4440.48Redoxin superfamily n=1 Tax=Coleofasciculus chthon... [more]
UPI00048F8EED1.340e-4446.02AhpC/TSA family protein n=1 Tax=Nocardiopsis sp. C... [more]
UPI001F2DF7DF1.340e-4444.89AhpC/TSA family protein n=1 Tax=Streptomyces sp. N... [more]
A0A544YUF6_9ACTN2.930e-4443.75AhpC/TSA family protein n=1 Tax=Microbispora haina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 52..232
e-value: 4.6E-36
score: 125.8
NoneNo IPR availablePIRSRPIRSR000239-1PIRSR000239-1coord: 54..212
e-value: 4.4E-4
score: 17.4
NoneNo IPR availablePANTHERPTHR42801:SF7SLL1159 PROTEINcoord: 18..229
NoneNo IPR availablePANTHERPTHR42801THIOREDOXIN-DEPENDENT PEROXIDE REDUCTASEcoord: 18..229
NoneNo IPR availableCDDcd02970PRX_like2coord: 59..208
e-value: 6.49365E-34
score: 117.46
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 56..206
e-value: 3.4E-27
score: 94.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 54..231
score: 14.679313
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 52..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:497861..498565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7615.t1Gvermi7615.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 497861..498565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7615.t1 ID=Gvermi7615.t1|Name=Gvermi7615.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=235bp
MTAVALSPHSVLPPLAPVLNAKKNQLNETLSPEFLAEIERTSVELQKLFT
PTPLRVNDVAPLFTLDDALGNPVSLSDLLDSHQAVVVTWYRGVWCPYCNA
TLDSLILANDHIEALGAKLVTISAQTPDESREMIEEMGLPFHTLSDDGLT
VAEKYGIAYSVTDGIKSLYNDFGVDLDAINGNERKRKPRLPVPATFVLDK
TGTVRFAYADIDYTTRAEPQQIVEVIQNIVESYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf