Gvermi7614.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7614.t1
Unique NameGvermi7614.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length628
Homology
BLAST of Gvermi7614.t1 vs. uniprot
Match: A0A2V3J0G4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0G4_9FLOR)

HSP 1 Score: 582 bits (1499), Expect = 1.480e-199
Identity = 316/579 (54.58%), Postives = 412/579 (71.16%), Query Frame = 0
Query:   50 MDTRIEVQLWNILKYVMLTLLLAPVVENAMSHITAWRNARLVNKHRGPIRLKASALGNFALHQEVETLHASSRLWQLFFVLFALAIALPFEYSSGARTRLTWS-QRRSPSGSIPLAASDDLVLLALNDP-KSVECVNPNRVANAGQFVSMQPLEKKPPFLEGNVTSEKILQLLDNPIY--TWESVTLRSRNGDSGLVLSAGGPDGQLALIIDTMRSGILVADFGSGSLCKGLLDEVFLCYDMAGQFTLSQLTYSLAAVSGSSMFLRNHFENAAQLYQFKKSMVTNSIGDPSVKENLVEQGLNESGLQWLLRHQRVGEGRTFVIVTVRLNAQLKSVSCQSPGSVQIRPLTLRVGDPQSVESEVVRVSAQSELKLVKAGSNLQTMLLTRVEDKDWDCAVDEIAGVCVDAANEAFYFLTKFNEGHIHEYRTEFELDVTRSVESHADLAVLQLNIKNEILRGGFLASWDIQDLLSSFHTSEDGARVISRKAGTTVPVSAGVRVTGTIETWAVLLYGCILFTFLGVLFFFRIKPLSSIDIETMYRQVVWQGEEAFQSSETPGMAPMIVIGAAEEDSQGILTARY 624
            MDT I VQLWN+LKY  LTLLLAP+ E+AMS ITAWRNA LVN H  PIRLK+S +GN +LHQEVETLH SS L QLF +L ALAIALPFEYSSGA + LTWS Q+RS S +I     ++L+LL+L++P + +ECVNP+R+A+ GQFV MQ  E  PPF++G VT E + Q+L        W  +TL SRNGD+G+    G    Q A+I +  R G+LVADF +GSLC GLL++ F CYDMAGQFT+SQL YSL AV G+S+FLR  FE  A+L++FK  +VTNSIGDPSV+ENL EQ LNESG +WL R           I T+RL+AQ++S +CQ+ GSVQIRPL  +VG+    E+  V VSA+ +L LVK G+ L+  LLT+V + DW CAVD ++GVC    N  FYFL+K     ++EY TEFE+ +TR+VESHADLA+L  +++++I   GF+A WD+Q LLS  H   +GAR I+R   T+VP+S+G+RVTGTI+ WA++LYG +L  F+ V+ FF+ K L+SI+IE +YR+VV Q E  +QS + P  AP I I A +ED +G  TA +
Sbjct:    1 MDTGINVQLWNVLKYFGLTLLLAPIAESAMSRITAWRNAYLVN-HGKPIRLKSSIMGNISLHQEVETLHVSSTLLQLFSILLALAIALPFEYSSGAESHLTWSRQQRSHSSAIATHDPNELILLSLSNPAERMECVNPDRLADVGQFVFMQSTEHTPPFMDGIVTLEDVKQILAVKYQGELWRRMTLHSRNGDTGIHFYVGSRTRQQAIIGNPERKGLLVADFEAGSLCIGLLNDTFSCYDMAGQFTVSQLVYSLTAVRGASLFLRTEFETEAKLFRFKAGLVTNSIGDPSVEENLFEQRLNESGFEWLERMYNEDGRAVLSISTLRLDAQMRSTNCQTIGSVQIRPLRFQVGEWLEGENFEVNVSAKGDLTLVKTGNLLKASLLTQVGE-DWKCAVDRLSGVCASETNGTFYFLSKAQS--VYEYTTEFEMQLTRNVESHADLAILLAHVESDIRTNGFVAPWDLQHLLSFPHNLSEGARTITRGMDTSVPISSGMRVTGTIQLWAIVLYGFLLLFFVSVVVFFKFKTLASINIERVYRRVVLQKESGYQSLKIPSTAPTIGIEALQEDGEGGWTASH 575          
BLAST of Gvermi7614.t1 vs. uniprot
Match: A0A2V3ID58_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID58_9FLOR)

HSP 1 Score: 233 bits (595), Expect = 5.190e-69
Identity = 126/236 (53.39%), Postives = 160/236 (67.80%), Query Frame = 0
Query:  230 VTLRSRNGDSGLVLSAGGPDGQLALIIDTMRSGILVADFGSGSLCKGLLDEVFLCYDMAGQFTLSQLTYSLAAVSGSSMFLRNHFENAAQLYQFKKSMVTNSIGDPSVKENLVEQGLNESGLQWLLRHQRVGEGRTFVIVTVRLNAQLKSVSCQSPGSVQIRPLTLRVGDPQSVESEVVRVSAQSELKLVKAGSNLQTMLLTRVEDKDWDCAVDEIAGVCVDAANEAFYFLTKFNE 465
            +TL SRNGD+G+ L  G   GQ A+I +  R G+LVADF +GSLCKGLL++ F CYDMAGQ T+SQL YSL AV G S+FLR  FE  A+L++FK  +VTNS+G PSV+ENL E+  NESG +WL R           I T+RL+AQ++S +CQS GSVQIRPL  +VG+    E   V VS + +L LVK G  LQ  LL +V + +W CAVD I+GVCV   N  FYFL + N+
Sbjct:    1 MTLHSRNGDTGIHLYVGVRTGQQAVIGNPERRGLLVADFEAGSLCKGLLNDTFSCYDMAGQLTVSQLVYSLTAVRGDSLFLRTKFETEAKLFRFKAGLVTNSVGGPSVEENLFERRQNESGFEWLERMYNEDGRAILSISTLRLDAQMRSSNCQSIGSVQIRPLRFQVGEWLEGEKFEVIVSPKGDLNLVKTGILLQATLLMQVGE-EWKCAVDRISGVCVSKTNGTFYFLARLNQ 235          
The following BLAST results are available for this feature:
BLAST of Gvermi7614.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0G4_9FLOR1.480e-19954.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID58_9FLOR5.190e-6953.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..550
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 551..570
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 571..627
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..141
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 551..570
NoneNo IPR availableTMHMMTMhelixcoord: 15..35
NoneNo IPR availableTMHMMTMhelixcoord: 56..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:459545..461428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7614.t1Gvermi7614.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 459545..461428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7614.t1 ID=Gvermi7614.t1|Name=Gvermi7614.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=628bp
MQHPVHTHATVNENLPSFLLMSSVAPYLFFRHVLLKPVPPTVRGLQLRAM
DTRIEVQLWNILKYVMLTLLLAPVVENAMSHITAWRNARLVNKHRGPIRL
KASALGNFALHQEVETLHASSRLWQLFFVLFALAIALPFEYSSGARTRLT
WSQRRSPSGSIPLAASDDLVLLALNDPKSVECVNPNRVANAGQFVSMQPL
EKKPPFLEGNVTSEKILQLLDNPIYTWESVTLRSRNGDSGLVLSAGGPDG
QLALIIDTMRSGILVADFGSGSLCKGLLDEVFLCYDMAGQFTLSQLTYSL
AAVSGSSMFLRNHFENAAQLYQFKKSMVTNSIGDPSVKENLVEQGLNESG
LQWLLRHQRVGEGRTFVIVTVRLNAQLKSVSCQSPGSVQIRPLTLRVGDP
QSVESEVVRVSAQSELKLVKAGSNLQTMLLTRVEDKDWDCAVDEIAGVCV
DAANEAFYFLTKFNEGHIHEYRTEFELDVTRSVESHADLAVLQLNIKNEI
LRGGFLASWDIQDLLSSFHTSEDGARVISRKAGTTVPVSAGVRVTGTIET
WAVLLYGCILFTFLGVLFFFRIKPLSSIDIETMYRQVVWQGEEAFQSSET
PGMAPMIVIGAAEEDSQGILTARYNSS*
back to top