Gvermi7603.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7603.t1
Unique NameGvermi7603.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length149
Homology
BLAST of Gvermi7603.t1 vs. uniprot
Match: R7Q637_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q637_CHOCR)

HSP 1 Score: 93.6 bits (231), Expect = 1.950e-20
Identity = 47/143 (32.87%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    3 DQQFSSSLTVSETEEYSRLRSDYQSGFGVPFLRWLGINLNNRRVTREDMQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVPSSGGDIDII 145
            D++F ++L+ +E   Y   ++ ++ G  +P  +W+G + + ++VT E        +ENY  +   A Q+L N    +++ISG L A G SF PT  FAFI++AR+  +DG++  +VS + +++VA  +GG+ +PS    +D+I
Sbjct:  114 DKEFEATLSAAEKSVYRTRKASWKKGLDIPLFKWIGADFD-KKVTTESFTEEAASQENYTEKVRAASQLLENSASTKIRISGSLKATGISFRPTVAFAFIKLARVTFEDGSSQLIVSNNPEDVVAGTSGGDVLPSEDPVVDVI 255          
BLAST of Gvermi7603.t1 vs. uniprot
Match: R7Q4Y7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y7_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 5.520e-12
Identity = 36/100 (36.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:   46 VTREDMQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVPSSGGDIDII 145
            +++E++    E  E +  +      IL  V   +++I+G LTA G S IPT  FAF+R+AR++ +DG+T  VVS   ++++AAD  G+ V +S  + DI+
Sbjct:   13 LSKEELVEKRESSEEFRKREQALTSILETVADTRIRINGTLTATGVSQIPTVAFAFVRLARIEFEDGSTQLVVSNKNEDIIAADEDGDAVGTSDQESDIL 112          
BLAST of Gvermi7603.t1 vs. uniprot
Match: A0A2V3IL72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL72_9FLOR)

HSP 1 Score: 67.4 bits (163), Expect = 1.180e-10
Identity = 44/140 (31.43%), Postives = 72/140 (51.43%), Query Frame = 0
Query:    3 DQQFSSSLTVSETEEYSRLRSDYQSGFGVPFLRWLGINLNNRR------VTREDMQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVP 136
            D  F+S++   E   Y   +  Y  G  +PFLR LGI+LN         V+R+D          Y  ++  A+QI+ + +  +L+I+G ++  G S  P+T   F++ +R+   D T L VVS + D++VA D   N +P
Sbjct:   99 DHIFTSTMNSRERILYEEAKRGYNGGLDIPFLRQLGIHLNESHSLDANLVSRDDY---------YALKAIAARQIMQSFRGGKLRINGTISVIGVSEQPSTARVFVKFSRVTLVDNTVLHVVSSNNDDVVAGDDSHNMLP 229          
The following BLAST results are available for this feature:
BLAST of Gvermi7603.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7Q637_CHOCR1.950e-2032.87Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7Q4Y7_CHOCR5.520e-1236.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IL72_9FLOR1.180e-1031.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_8089contigScGOVlb_8089:107..553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7603.t1Gvermi7603.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_8089 107..553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7603.t1 ID=Gvermi7603.t1|Name=Gvermi7603.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=149bp
TLDQQFSSSLTVSETEEYSRLRSDYQSGFGVPFLRWLGINLNNRRVTRED
MQRSFEMRENYNTQSTIAQQILSNVQQQQLQISGELTAFGTSFIPTTVFA
FIRIARLQTQDGTTLTVVSQSGDNLVAADAGGNTVPSSGGDIDIIPLF*
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