Gvermi7243.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi7243.t1
Unique Name	Gvermi7243.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	159

Homology

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A2A5GHR2_9GAMM (Biotin carboxylase n=2 Tax=Porticoccaceae TaxID=1706374 RepID=A0A2A5GHR2_9GAMM)

HSP 1 Score: 298 bits (763), Expect = 5.490e-98
Identity = 146/158 (92.41%), Postives = 153/158 (96.84%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPV+EMITGVDIVKEQLLIASGEKLS++QEDIIFRGH+FECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYG++R AALSRM  ALDELHIEGIKTNTELQRDLVCD  F+KGGVNIHYLEKKLGL
Sbjct:  289 MNTRVQVEHPVTEMITGVDIVKEQLLIASGEKLSFSQEDIIFRGHAFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGKDRDAALSRMACALDELHIEGIKTNTELQRDLVCDTEFRKGGVNIHYLEKKLGL 446

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A2E2W3B4_9GAMM (Biotin carboxylase n=1 Tax=Porticoccus sp. TaxID=2024853 RepID=A0A2E2W3B4_9GAMM)

HSP 1 Score: 283 bits (725), Expect = 3.010e-92
Identity = 140/158 (88.61%), Postives = 144/158 (91.14%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPV+EMITGVDIVK+QLLIASGEKLS  Q DIIFRGHSFECRINAED  TFMPSPGKITAYH PGGNGVRVDSHIYAGYTVPP+YDSLVGKIITYGQ R AALSRM NALDELHIEGIKTN  LQRDLVCD  F+KGGVNIHYLEKKL L
Sbjct:  289 MNTRVQVEHPVTEMITGVDIVKQQLLIASGEKLSLRQSDIIFRGHSFECRINAEDPVTFMPSPGKITAYHPPGGNGVRVDSHIYAGYTVPPYYDSLVGKIITYGQTREAALSRMANALDELHIEGIKTNITLQRDLVCDANFRKGGVNIHYLEKKLNL 446

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A3D3T4B3_9GAMM (Acetyl-CoA carboxylase biotin carboxylase subunit (Fragment) n=2 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A3D3T4B3_9GAMM)

HSP 1 Score: 263 bits (672), Expect = 3.290e-88
Identity = 124/158 (78.48%), Postives = 143/158 (90.51%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPVSEMITGVDIVKEQLLIASGE +S++Q+ I+FRGH+FECRINAEDS TFMPSPGK+T +H PGGNGVRVDSH+Y GY +PP+YDSL+ KIITYG++R AAL+RM+ ALDEL I GIKTNT+LQRDLV D  F++GGVNIHYLEKKLGL
Sbjct:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEPMSFSQDQIVFRGHAFECRINAEDSVTFMPSPGKVTTFHPPGGNGVRVDSHLYCGYVIPPNYDSLIAKIITYGKDREAALARMKTALDELFILGIKTNTDLQRDLVSDAEFKQGGVNIHYLEKKLGL 158

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A2D5QGM3_9GAMM (Biotin carboxylase n=1 Tax=Porticoccus sp. TaxID=2024853 RepID=A0A2D5QGM3_9GAMM)

HSP 1 Score: 270 bits (689), Expect = 8.140e-87
Identity = 130/158 (82.28%), Postives = 142/158 (89.87%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTR+QVEHPV+EMITG+DIVKEQLLIA G KLS  QED+I RGH+FECRINAEDS+TFMPSPGKITAYHAPGGNGVRVDSHIY GYTVPP+YDSLVGKIIT G++R  ALSRM NALDELHIEGIKTN  LQ+DLV DK F +GGVNIHYLEKKL +
Sbjct:  289 MNTRIQVEHPVTEMITGIDIVKEQLLIAGGNKLSMGQEDVIIRGHAFECRINAEDSSTFMPSPGKITAYHAPGGNGVRVDSHIYTGYTVPPYYDSLVGKIITRGKDRGGALSRMANALDELHIEGIKTNINLQKDLVSDKEFCRGGVNIHYLEKKLSI 446

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A2A5BX14_9GAMM (Biotin carboxylase n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2A5BX14_9GAMM)

HSP 1 Score: 269 bits (688), Expect = 1.150e-86
Identity = 126/158 (79.75%), Postives = 145/158 (91.77%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPVSEMITG+DIVKEQLLIA GEKL +TQ+++IFRGH+FECRINAED+ TFMPSPGK+TAYH PGGNGVRVDSH+Y+ Y+VPP+YDSL+ KIITYG++R AAL RM NALDEL IEGIKTN +LQRDLV D+ F++GGVNIHYLEKKLGL
Sbjct:  289 MNTRVQVEHPVSEMITGIDIVKEQLLIAGGEKLGFTQDEVIFRGHAFECRINAEDAVTFMPSPGKVTAYHPPGGNGVRVDSHLYSSYSVPPNYDSLIAKIITYGKDRDAALGRMRNALDELFIEGIKTNIDLQRDLVTDEGFKRGGVNIHYLEKKLGL 446

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BLAST of Gvermi7243.t1 vs. uniprot
Match: W2UID3_9GAMM (Biotin carboxylase n=2 Tax=unclassified Porticoccaceae TaxID=1706432 RepID=W2UID3_9GAMM)

HSP 1 Score: 267 bits (682), Expect = 9.240e-86
Identity = 129/158 (81.65%), Postives = 142/158 (89.87%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPVSEMITG+DIVKEQLLIASG  LS+TQ+D+IFRGHSFECRINAED  TFMP PG IT+YHAPGGNGVRVDSHIY GY VPP+YDSL+GKIITYG++R +ALSRM NALDE+ I+GIKTN EL +DLV D  FQKGGVNIHYLEKKLGL
Sbjct:  289 MNTRVQVEHPVSEMITGIDIVKEQLLIASGRPLSFTQKDVIFRGHSFECRINAEDPVTFMPQPGTITSYHAPGGNGVRVDSHIYNGYRVPPNYDSLIGKIITYGRDRDSALSRMRNALDEMMIDGIKTNIELHQDLVRDPEFQKGGVNIHYLEKKLGL 446

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A352Q5L2_9GAMM (Biotin carboxylase n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q5L2_9GAMM)

HSP 1 Score: 265 bits (677), Expect = 5.240e-85
Identity = 126/158 (79.75%), Postives = 144/158 (91.14%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPV+EMITGVDIVKEQL IASGE+LS+ Q+DIIFRGH+FECRINAEDS TFMPSPGK+T +H PGGNGVRVDSH+Y GY++PP+YDSL+ KIITYG++R +AL+RM  ALDEL+I GIKTNT+LQR LV D AFQKGGVNIHYLEKKLGL
Sbjct:  289 MNTRVQVEHPVTEMITGVDIVKEQLRIASGEQLSFKQDDIIFRGHAFECRINAEDSKTFMPSPGKVTTFHPPGGNGVRVDSHLYCGYSIPPNYDSLIAKIITYGKDRDSALARMRTALDELYILGIKTNTDLQRSLVTDAAFQKGGVNIHYLEKKLGL 446

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A351Q4M7_9GAMM (Biotin carboxylase (Fragment) n=3 Tax=unclassified Porticoccaceae TaxID=1706432 RepID=A0A351Q4M7_9GAMM)

HSP 1 Score: 263 bits (672), Expect = 2.180e-84
Identity = 129/158 (81.65%), Postives = 141/158 (89.24%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPVSEMITGVDIVKEQLLIASG +LS+TQE IIFRGHSFECRINAED  TFMP PG I AYHAPGGNGVRVDSHIY GY VPP+YDSL+GKIITYG++R +ALSRM NALDE+ I+GIKTN +L   LV D+AF+KGGVNIHYLEKKLGL
Sbjct:  278 MNTRVQVEHPVSEMITGVDIVKEQLLIASGRELSFTQEQIIFRGHSFECRINAEDPVTFMPQPGTINAYHAPGGNGVRVDSHIYNGYRVPPNYDSLIGKIITYGRDRESALSRMRNALDEMVIDGIKTNIDLHARLVRDEAFKKGGVNIHYLEKKLGL 435

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A496X101_9GAMM (Biotin carboxylase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496X101_9GAMM)

HSP 1 Score: 262 bits (669), Expect = 8.640e-84
Identity = 123/158 (77.85%), Postives = 144/158 (91.14%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTR+QVEHPV+EMITGVDIVKEQLL+ASGE LS+TQ++IIFRGH+FECRINAED+ TFMPSPGK+T +H PGGNGVRVDSH+Y GYTVPP+YDSL+ K+ITYG++R AAL+RM +ALDEL I GI+TNT+LQRDLV D  FQ+G VNIHYLEKKLGL
Sbjct:  289 MNTRIQVEHPVTEMITGVDIVKEQLLVASGEPLSFTQDEIIFRGHAFECRINAEDARTFMPSPGKVTTFHPPGGNGVRVDSHLYCGYTVPPNYDSLIAKVITYGKDREAALTRMRSALDELFILGIQTNTDLQRDLVTDAEFQRGCVNIHYLEKKLGL 446

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BLAST of Gvermi7243.t1 vs. uniprot
Match: A0A0R2W484_9GAMM (Biotin carboxylase n=1 Tax=SAR92 bacterium BACL16 MAG-120619-bin48 TaxID=1655625 RepID=A0A0R2W484_9GAMM)

HSP 1 Score: 261 bits (667), Expect = 1.680e-83
Identity = 128/158 (81.01%), Postives = 140/158 (88.61%), Query Frame = 0

Query:    1 MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECRINAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKIITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIHYLEKKLGL 158
            MNTRVQVEHPVSEMITGVDIVKEQLLIASG  LS+ Q+DIIFRGH+FECRINAED  TF+P PG I +YHAPGGNGVRVDSHIY GY VPP+YDSL+GKIITYG NR AALSRM NALDE+ I+GIKTN EL ++LV D AF+KGGVNIHYLEKKLGL
Sbjct:  289 MNTRVQVEHPVSEMITGVDIVKEQLLIASGLPLSFKQDDIIFRGHAFECRINAEDPVTFLPQPGTIKSYHAPGGNGVRVDSHIYNGYRVPPNYDSLIGKIITYGHNRDAALSRMRNALDEMMIDGIKTNIELHQNLVKDAAFKKGGVNIHYLEKKLGL 446

The following BLAST results are available for this feature:

BLAST of Gvermi7243.t1 vs. uniprot

BLAST of Gvermi7243.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2A5GHR2_9GAMM	5.490e-98	92.41	Biotin carboxylase n=2 Tax=Porticoccaceae TaxID=17...	[more]
A0A2E2W3B4_9GAMM	3.010e-92	88.61	Biotin carboxylase n=1 Tax=Porticoccus sp. TaxID=2...	[more]
A0A3D3T4B3_9GAMM	3.290e-88	78.48	Acetyl-CoA carboxylase biotin carboxylase subunit ...	[more]
A0A2D5QGM3_9GAMM	8.140e-87	82.28	Biotin carboxylase n=1 Tax=Porticoccus sp. TaxID=2...	[more]
A0A2A5BX14_9GAMM	1.150e-86	79.75	Biotin carboxylase n=5 Tax=Gammaproteobacteria Tax...	[more]
W2UID3_9GAMM	9.240e-86	81.65	Biotin carboxylase n=2 Tax=unclassified Porticocca...	[more]
A0A352Q5L2_9GAMM	5.240e-85	79.75	Biotin carboxylase n=1 Tax=Porticoccaceae bacteriu...	[more]
A0A351Q4M7_9GAMM	2.180e-84	81.65	Biotin carboxylase (Fragment) n=3 Tax=unclassified...	[more]
A0A496X101_9GAMM	8.640e-84	77.85	Biotin carboxylase n=2 Tax=Gammaproteobacteria bac...	[more]
A0A0R2W484_9GAMM	1.680e-83	81.01	Biotin carboxylase n=1 Tax=SAR92 bacterium BACL16 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005482	Biotin carboxylase, C-terminal	SMART	SM00878	Biotin_carb_C_2	coord: 48..153 e-value: 9.3E-61 score: 217.8
IPR005482	Biotin carboxylase, C-terminal	PFAM	PF02785	Biotin_carb_C	coord: 48..153 e-value: 5.0E-39 score: 132.7
IPR005479	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	PFAM	PF02786	CPSase_L_D2	coord: 1..34 e-value: 1.4E-10 score: 41.0
None	No IPR available	GENE3D	3.30.470.20		coord: 1..156 e-value: 1.9E-64 score: 219.3
None	No IPR available	PANTHER	PTHR48095:SF2	BIOTIN CARBOXYLASE, CHLOROPLASTIC	coord: 1..155
None	No IPR available	PANTHER	PTHR48095	PYRUVATE CARBOXYLASE SUBUNIT A	coord: 1..155
None	No IPR available	SUPERFAMILY	56059	Glutathione synthetase ATP-binding domain-like	coord: 1..55
IPR011764	Biotin carboxylation domain	PROSITE	PS50979	BC	coord: 1..157 score: 29.609493
IPR011054	Rudiment single hybrid motif	SUPERFAMILY	51246	Rudiment single hybrid motif	coord: 43..156

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_970	contig	ScGOVlb_970:1703..2179 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi7243.t1	Gvermi7243.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_970 1703..2179 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi7243.t1 ID=Gvermi7243.t1|Name=Gvermi7243.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=159bp
MNTRVQVEHPVSEMITGVDIVKEQLLIASGEKLSYTQEDIIFRGHSFECR
INAEDSTTFMPSPGKITAYHAPGGNGVRVDSHIYAGYTVPPHYDSLVGKI
ITYGQNRAAALSRMENALDELHIEGIKTNTELQRDLVCDKAFQKGGVNIH
YLEKKLGL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005482	Biotin_COase_C
IPR005479	CbamoylP_synth_lsu-like_ATP-bd
IPR011764	Biotin_carboxylation_dom
IPR011054	Rudment_hybrid_motif