Gvermi7095.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7095.t1
Unique NameGvermi7095.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length148
Homology
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A2V3INK3_9FLOR (Iron-sulfur cluster assembly 2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK3_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 9.730e-54
Identity = 90/142 (63.38%), Postives = 109/142 (76.76%), Query Frame = 0
Query:    5 ALNTAVVSRTCQTLRRAFTTPVADAKLQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPK 146
            AL+   +S   QT R   +T    + LQIT RC +RI +L +QRN  +VLRVQVDGGGCSGFQYGF LE WDQ+P  S L  K D L+EQDG  VIVDD+SLA+VSG+K+D+VQE+ISSSFR+T+NPNS+ SCGCGVSFSPK
Sbjct:   13 ALSLRRLSAHLQTAR-PLSTATQTSALQITQRCAERINELSRQRNKHVVLRVQVDGGGCSGFQYGFVLEDWDQQPQPSQLTDKHDILLEQDGAHVIVDDMSLAYVSGSKLDFVQELISSSFRVTENPNSEASCGCGVSFSPK 153          
BLAST of Gvermi7095.t1 vs. uniprot
Match: R7QGG7_CHOCR (Fe-S_biosyn domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGG7_CHOCR)

HSP 1 Score: 167 bits (423), Expect = 1.180e-50
Identity = 81/142 (57.04%), Postives = 106/142 (74.65%), Query Frame = 0
Query:    6 LNTAVVSRTCQTLRRAFTTPVADAKLQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPKM 147
            + TAV +R     RR  +       ++ITP CV+R+K+LQ+QR   + LRV VDGGGCSGFQY F++E W+  PD  SLK   D L E+DG  VIVD++SLA++SG+KVDY++EMISSSFR+T+NPNS+TSCGCG SFSPK+
Sbjct:    8 VRTAVATRL---YRRMLSEAARAHAVEITPTCVKRLKELQEQRRKNVALRVTVDGGGCSGFQYAFDVENWEVAPDQKSLKSGNDVLFEKDGAAVIVDNLSLAYISGSKVDYIEEMISSSFRVTENPNSETSCGCGTSFSPKL 146          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A8J5XWN1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XWN1_DIALT)

HSP 1 Score: 120 bits (302), Expect = 2.200e-32
Identity = 62/128 (48.44%), Postives = 84/128 (65.62%), Query Frame = 0
Query:   19 RRAFTTPVADAKLQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPK 146
            RR  ++ V ++ + ITP C  R+K L  +  A   LR+ VD GGCSGFQY F+LE  +        +  +D++ EQDG  ++VD +SL ++ GA VDYVQEM+ SSF + DNPNS+ SCGCG SFSPK
Sbjct:   20 RRGLSSAV-ESGVHITPGCADRLKSLSSREGAK-ALRIAVDSGGCSGFQYTFKLEPLETP------RGPKDRVFEQDGASIVVDALSLEYLQGATVDYVQEMVKSSFEVVDNPNSEASCGCGTSFSPK 139          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A7S0DCZ0_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DCZ0_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 6.840e-32
Identity = 61/121 (50.41%), Postives = 88/121 (72.73%), Query Frame = 0
Query:   27 ADAKLQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPKM 147
            A  +++IT  C +R+K+L+ Q+N  L LRV+VD GGCSGFQY F LE     P +  L+ + D  IEQ+G  ++VD+ SL F++G+ +DY QE+I S F +++NPNS+++CGCGVSFSPKM
Sbjct:   28 ATHQVKITETCSKRLKELKDQKNEDLRLRVRVDSGGCSGFQYEFILE-----PKSLELE-EGDLAIEQNGAQLVVDEASLEFLNGSTIDYEQELIGSKFVVSENPNSESACGCGVSFSPKM 142          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A7S0QFM6_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QFM6_9CRYP)

HSP 1 Score: 118 bits (296), Expect = 2.450e-31
Identity = 64/116 (55.17%), Postives = 77/116 (66.38%), Query Frame = 0
Query:   31 LQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPK 146
            L ITPRC QRI +++        LR++VDGGGCSGF+Y FEL         S      D + E+DG  V+VD VSL  V GAKVD+V+EMISSSF+I +NP SD SCGCG SFSPK
Sbjct:   47 LDITPRCAQRISEVKPGG----FLRLRVDGGGCSGFKYKFEL---------SESLDSDDHIFERDGAKVVVDGVSLEMVRGAKVDFVEEMISSSFQIVENPKSDASCGCGASFSPK 149          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A7S3EKL4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKL4_9RHOD)

HSP 1 Score: 117 bits (292), Expect = 1.110e-30
Identity = 60/119 (50.42%), Postives = 86/119 (72.27%), Query Frame = 0
Query:   29 AKLQITPRCVQRIKQLQQQRN-ALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPK 146
            ++++++ RC QR+K++   R  A + LR+ V+GGGCSGFQY F LE + Q+P       + + + E+DG  VIVDDVSL F+SG++VD+ +EMI +SF+I DNPNSD+SC CG SFS K
Sbjct:   43 SEVRVSDRCAQRLKEISSSRGGADVALRITVEGGGCSGFQYHFNLEEF-QRPT------EDEHVFEKDGRKVIVDDVSLPFISGSEVDFEEEMIRTSFKIVDNPNSDSSCSCGSSFSAK 154          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A7S0TTR2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TTR2_HEMAN)

HSP 1 Score: 114 bits (286), Expect = 2.810e-30
Identity = 60/117 (51.28%), Postives = 78/117 (66.67%), Query Frame = 0
Query:   31 LQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPKM 147
            LQIT RC QRI ++        +LR++VDGGGCSGFQY FELE          L  + D L    G  V++D+VSL  V G+K+D+V+EMISSSF++ DNP S++SCGCG SF+ KM
Sbjct:   11 LQITDRCAQRISKVNPDG----LLRLRVDGGGCSGFQYKFELE---------KLTEEGDLLFGSKGAQVVIDEVSLEMVQGSKIDFVEEMISSSFQVVDNPQSESSCGCGASFARKM 114          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A6U3EDK7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3EDK7_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 7.150e-30
Identity = 59/136 (43.38%), Postives = 88/136 (64.71%), Query Frame = 0
Query:   13 RTCQTLRRA-FTTPVADAKLQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPKM 147
            R C  L ++ F +   D K+ IT  C  R+K+L++ +   L LRV+VD GGCSGF+Y F LE     P  + L+ + D+  E  G  ++VD+ S+ F+ G+ +DY QE+I S F ++ NPNS+++CGCGVSFSPK+
Sbjct:   42 RPCSLLAQSRFFSEAVDTKVSITDTCASRLKELREMKEQELRLRVRVDSGGCSGFEYQFILE-----PTEAELE-EGDQKFEHGGAHIVVDEASMEFLKGSTIDYEQELIGSKFVVSSNPNSESACGCGVSFSPKL 171          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A7S2F6G7_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2F6G7_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 2.610e-28
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0
Query:   31 LQITPRCVQRIKQLQQQRNALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPK 146
            ++++  CV+RI+QL ++  A   LRV V+ GGCSG+QY FE E+ D   D+       D ++++DG  V+VD VSL F+ GA VD+ +E+I SSF I DNPNS++ CGCG SF+ K
Sbjct:   17 IKLSDACVRRIRQLAEEDGAERRLRVSVEAGGCSGYQYKFEWESPDDAEDS-------DVVVDRDGAIVVVDRVSLEFLRGATVDFTEELIRSSFTIVDNPNSESGCGCGSSFNAK 125          
BLAST of Gvermi7095.t1 vs. uniprot
Match: A0A7S0N086_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N086_9CHLO)

HSP 1 Score: 112 bits (279), Expect = 3.070e-28
Identity = 65/143 (45.45%), Postives = 86/143 (60.14%), Query Frame = 0
Query:   14 TCQTLRRAFTTPVADAK-LQITPRCVQRIKQLQQQR---------NALLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVIVDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPK 146
            T  TL R F++    A  L I+   V+RIK+L ++          +    LRV VD GGCSGFQY FEL          +   K D + E+DGV +IVDDVSL+FV GA +DY +EMI +SF++ DNPN+++ CGCG SFS K
Sbjct:   62 TLPTLTRWFSSEATTAADLTISDAAVRRIKELHEEEAGDKPAVDESERTKLRVAVDAGGCSGFQYTFEL---------CTKVSKDDTVFERDGVAIIVDDVSLSFVRGATIDYTEEMIRASFQVVDNPNAESGCGCGASFSAK 195          
The following BLAST results are available for this feature:
BLAST of Gvermi7095.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INK3_9FLOR9.730e-5463.38Iron-sulfur cluster assembly 2-like n=1 Tax=Gracil... [more]
R7QGG7_CHOCR1.180e-5057.04Fe-S_biosyn domain-containing protein n=1 Tax=Chon... [more]
A0A8J5XWN1_DIALT2.200e-3248.44Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S0DCZ0_9EUKA6.840e-3250.41Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S0QFM6_9CRYP2.450e-3155.17Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S3EKL4_9RHOD1.110e-3050.42Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0TTR2_HEMAN2.810e-3051.28Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A6U3EDK7_9EUKA7.150e-3043.38Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2F6G7_9CHLO2.610e-2847.41Hypothetical protein n=1 Tax=Pycnococcus provasoli... [more]
A0A7S0N086_9CHLO3.070e-2845.45Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 30..140
e-value: 2.5E-16
score: 59.9
IPR016092FeS cluster insertion proteinTIGRFAMTIGR00049TIGR00049coord: 31..144
e-value: 5.0E-31
score: 105.0
IPR035903HesB-like domain superfamilyGENE3D2.60.300.12coord: 30..144
e-value: 3.5E-33
score: 115.9
IPR035903HesB-like domain superfamilySUPERFAMILY89360HesB-like domaincoord: 31..133
NoneNo IPR availablePANTHERPTHR43011:SF1IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIALcoord: 22..146
NoneNo IPR availablePANTHERPTHR43011IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIALcoord: 22..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1632882..1633325 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7095.t1Gvermi7095.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1632882..1633325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7095.t1 ID=Gvermi7095.t1|Name=Gvermi7095.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=148bp
MFRPALNTAVVSRTCQTLRRAFTTPVADAKLQITPRCVQRIKQLQQQRNA
LLVLRVQVDGGGCSGFQYGFELEAWDQKPDASSLKHKQDKLIEQDGVCVI
VDDVSLAFVSGAKVDYVQEMISSSFRITDNPNSDTSCGCGVSFSPKM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000361FeS_biogenesis
IPR016092FeS_cluster_insertion
IPR035903HesB-like_dom_sf