Gvermi7090.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7090.t1
Unique NameGvermi7090.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length412
Homology
BLAST of Gvermi7090.t1 vs. uniprot
Match: A0A2V3ITX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITX8_9FLOR)

HSP 1 Score: 429 bits (1103), Expect = 1.500e-145
Identity = 224/405 (55.31%), Postives = 277/405 (68.40%), Query Frame = 0
Query:    4 RNRTFCGDATDIALGDDRVKTSKPNQCRVGCQSFSHPDIAMTTRSAECAFDLCHLVQPFRTFDHGTRMCQPRAVCISACGEEPPGCVYSGTCREFTCFHDRNTGRPANFTRITYAGPRTIVRVNDSVTSDKSPYDNSLDAVLISRDSCHGTYYRIDSKVCRKSGDALLSV--DEEQEFVQCRNVCRNIRNDDVEIVRMRTSCNLCSSEAEKSVCIPQSECHARCEKPFTNVAGCVFTGTCKSMICVSGIDSKLPAVIAVTNDTGLGGVIVSVDNTKAPTTLDPPVYAKYLEDVFVPDARIENTANNDEEVGSADHSQEPMVLTEPDNVKT-LKNSTGPPRKRGRRPRLKTGDGEGSKWGWLGPVVGLVGTAFTALAALAAAYIARGKAAHWGTKDSPFGGDDLYD 405
            RN T C +A D+ALGDDR+   KPNQCRVGC+ F+HPDIAM+ RSA C+FDLC +  PFRTF  GTRMCQPRA+CIS+CGEEPPGCVYSGTCREFTCFHD+NTG PA+FTR+T+AGPR+IVRVN+SVTSD       +DAVLIS D C           C +S +  LS   D+++EFVQCR  CRNIRN++VEIVRMRT+C  CSS +   +CI QSEC  RC  P   V GCVFTG+CKS++CVSGIDSKLPAV+ V+++TG GG+IVSVDN +   ++DPPV+ KYLE+  VP+A I  T   D  V    +    + +++ +N  T   NS   P         K+ D + SKW WLGP +GL G   TALAA+ AAYIAR    +      P    D+YD
Sbjct:   31 RNVTSCNNAVDVALGDDRIAGEKPNQCRVGCKYFTHPDIAMSIRSANCSFDLCDVPLPFRTFTFGTRMCQPRALCISSCGEEPPGCVYSGTCREFTCFHDKNTGLPASFTRLTFAGPRSIVRVNESVTSDTPSTYGPVDAVLISGDRCSDDNRPRTYGHCAESTNVFLSDQGDDDEEFVQCRRACRNIRNEEVEIVRMRTNCKSCSSLSPPYLCIAQSECRDRCNAPL--VEGCVFTGSCKSLVCVSGIDSKLPAVVNVSDETGKGGIIVSVDNARLTASIDPPVFVKYLENRRVPNASIPVTVTGDSHVPLVQN----VDISDSENASTNTNNSASSP--------TKSQDEQVSKWLWLGPTIGLFGALITALAAIVAAYIARNGITNRTRNKKPI---DIYD 418          
BLAST of Gvermi7090.t1 vs. uniprot
Match: A0A2V3ITZ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITZ2_9FLOR)

HSP 1 Score: 244 bits (624), Expect = 3.790e-75
Identity = 138/291 (47.42%), Postives = 184/291 (63.23%), Query Frame = 0
Query:  100 CFHDRNTGRPANFTRITYAGPRTIVRVNDSVTSDKSPYDNSLDAVLISRDSCHGTYYRIDSKVCRKSGDALLSV--DEEQEFVQCRNVCRNIRNDDVEIVRMRTSCNLCSSEAEKSVCIPQSECHARCEKPFTNVAGCVFTGTCKSMICVSGIDSKLPAVIAVTNDTGLGGVIVSVDNTKAPTTLDPPVYAKYLEDVFVPDARIENTANNDEEVGSADHSQEPMVLTEPDNVKT-LKNSTGPPRKRGRRPRLKTGDGEGSKWGWLGPVVGLVGTAFTALAALAAAYIARGK 387
            C    NTG+ A+FTR+ +AGPR+IVRVN+SVTSD       +DAVLIS D C           C +S +  LS   D+++EFVQC   CRNIRN++VEI RMRT+C  CSS ++  + I QSEC  RC  P   V GCVF G+CKS++CVSGIDSKLPAV+ V++DTG GG+IVSVDN +   ++DPPV+ KY+E++ VP+A I  T   D  V    +    + +++ +N  T   NS   P         ++ D + SKW WLGP +G +G   TALAA+ AAYIA+ K
Sbjct:    5 CIGQENTGKHASFTRLKFAGPRSIVRVNESVTSDTPSKYGPVDAVLISEDRCSDDNRPRTHGHCAESTNLYLSDQGDDDEEFVQCSRACRNIRNEEVEIFRMRTNCKSCSSLSQPYLSIAQSECRDRCNAPL--VEGCVFPGSCKSLVCVSGIDSKLPAVVNVSDDTGKGGIIVSVDNARLTASIDPPVFVKYVENMRVPNASIPVTFTGDSHVPLVQN----VDISDSENASTNTNNSASSP--------TESQDEQVSKWLWLGPTIGSLGAIITALAAIVAAYIAQNK 281          
The following BLAST results are available for this feature:
BLAST of Gvermi7090.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITX8_9FLOR1.500e-14555.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITZ2_9FLOR3.790e-7547.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..354
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..357
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 385..411
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 358..384
NoneNo IPR availableTMHMMTMhelixcoord: 358..380

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1594033..1595268 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7090.t1Gvermi7090.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1594033..1595268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7090.t1 ID=Gvermi7090.t1|Name=Gvermi7090.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=412bp
MPRRNRTFCGDATDIALGDDRVKTSKPNQCRVGCQSFSHPDIAMTTRSAE
CAFDLCHLVQPFRTFDHGTRMCQPRAVCISACGEEPPGCVYSGTCREFTC
FHDRNTGRPANFTRITYAGPRTIVRVNDSVTSDKSPYDNSLDAVLISRDS
CHGTYYRIDSKVCRKSGDALLSVDEEQEFVQCRNVCRNIRNDDVEIVRMR
TSCNLCSSEAEKSVCIPQSECHARCEKPFTNVAGCVFTGTCKSMICVSGI
DSKLPAVIAVTNDTGLGGVIVSVDNTKAPTTLDPPVYAKYLEDVFVPDAR
IENTANNDEEVGSADHSQEPMVLTEPDNVKTLKNSTGPPRKRGRRPRLKT
GDGEGSKWGWLGPVVGLVGTAFTALAALAAAYIARGKAAHWGTKDSPFGG
DDLYDVDKDKL*
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