Gvermi7083.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7083.t1
Unique NameGvermi7083.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length348
Homology
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A2V3INK9_9FLOR (RNA polymerase II-associated protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK9_9FLOR)

HSP 1 Score: 429 bits (1102), Expect = 1.430e-147
Identity = 226/350 (64.57%), Postives = 289/350 (82.57%), Query Frame = 0
Query:    1 MDLGTEEQLLQLSLTGRLPPSLQRSFDEEKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKAELNMLRERYGVPPPI--LRSRSRNYTGSDSKIKIVSESNDHTNGVAPPPKISPPSLP-FSEIRDETEILQLSNDTMQNLVLKWSSNEPHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQEITSFINSLERIDVAPALIESLRASYL 347
            M+ GTEEQLLQLSLTGRLPPSLQ+SFDEEKEKGNNAYR GRYH+AVQHY+AAESINPMSP+PPANRAMVFLKL D+ERAKAEA+IA+ELH S+P+EDR+KRL AKILLRRATANKEL+L+ALAAEDYQAVL LEDNATAKAEL +L++RYG+ PP   LRS  RN   S+ +I++VSE+   +NG+A   K +  S P  S+ +D+TE++Q+S  TMQ+L++KW + EP  A DFERSW+SL++D++AQAKYLLEVVG QRIE+GLLGEILT QL++RV+ VLS A+ +     +S A IL+AF++VSRF M+LMFL+S E+++I   I++L + +V+  +I++L   YL
Sbjct:    1 MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGNNAYREGRYHDAVQHYTAAESINPMSPIPPANRAMVFLKLKDFERAKAEASIAHELHISVPEEDRNKRLSAKILLRRATANKELMLYALAAEDYQAVLGLEDNATAKAELRVLQQRYGIRPPSPRLRSSLRNSASSEPRIEVVSETTARSNGMAV--KTTQTSRPAVSKDQDDTELVQISKSTMQDLLVKWGTTEPRNAVDFERSWKSLRDDEMAQAKYLLEVVGAQRIEQGLLGEILTAQLLERVILVLSTALMREPGYKSSIALILLAFTKVSRFSMVLMFLTSAEKRKIRILIDTLRKNNVSEEMIDNLGERYL 348          
BLAST of Gvermi7083.t1 vs. uniprot
Match: UPI000180C503 (RNA polymerase II-associated protein 3-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=UPI000180C503)

HSP 1 Score: 82.4 bits (202), Expect = 1.140e-13
Identity = 83/346 (23.99%), Postives = 140/346 (40.46%), Query Frame = 0
Query:   30 KEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLE-DNATAKAELNMLRE--------------------RYGVPPPILRSRSR-----------------------NYTGSDSKIKIVSESNDHTNGVAPPPKISPPSLPFSEIRDETEILQLSNDTMQNLVLKWSSNEPHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQEITSFINSLER 331
            KE+GN  +++G+Y +AV  Y+ +   +P + + PANRAM +LKL  +   +A+  ++  L  +            K  LRR +A   +   A A +D+   L LE +N  A  EL +++                     + GV  P++++ +R                       + T S++ I      +  T       K++P S   S  R      + S  T +          P T   F  + RSL+ +  A   YL ++  P      LL + L P ++  ++   S   + N      A   L A S   RFDMI+MFLS  ++ E+ S    +E+
Sbjct:  130 KEEGNKYFKAGKYEDAVNSYTKSMEYDPTNAIFPANRAMAYLKLQKFIETEADCTLSLSLDPAY----------TKAYLRRGSARVAMGKVASAVKDFNDALKLEPNNNQALKELELIKHEGNKDLKQEDTKPKDMKRIPKKGVVLPVIKAPNRRSKKPLRRIHVTEIPATNTAVDSSKTNSENTISKFEHKSSKTESDTTTTKLTP-SKEMSSARSARIPEESSIQTNKATTPTPIPAAPTTCFQFHAALRSLQHNTKATYTYLQQI--PTSTLNKLLKDQLEPSVLMTIIRCFSDCFSNNEDF---AIAFLTAMSSAKRFDMIIMFLSKSDKNEVKSLFELMEK 459          
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A8J1UAN7_OWEFU (Ofus.G112090 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UAN7_OWEFU)

HSP 1 Score: 80.9 bits (198), Expect = 5.810e-13
Identity = 85/342 (24.85%), Postives = 153/342 (44.74%), Query Frame = 0
Query:   26 FDEEKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKAELNMLRERYGVPPPILRSRSRNYT---GSDSKIKIVSESNDH-----------------------TNGVAPPPKISPPSLPFSEIRDETEILQLSN--DTMQNLVLKWSSNEPH-----TAADFERSWRSLK-EDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCG--TSAAKILIAFSRVSRFDMILMFLSSMERQEITSFINSLE 330
            FD  K +GN+  +   +  A++ Y+   S+ P  PV   NRA+ +L++N  ++A+ +  +  +     PQ         K L RRA A K L+ +  + ED   +L L+  N+ AK E +++++ Y      ++S   + +   G    I+ V  S+D                        T G+      SP   P  + + + ++ + S   +T   L  K + + PH     T  +F  +W SLK   ++A    +L  + P+ I +     +L+ +L   + +++ K V      G       IL   S+V RFD+I MF+SS E+Q +T  ++SL+
Sbjct:  691 FDNLKAQGNDCVQKSNFSRAIECYTGCISLAPERPVSYTNRALCYLRINKPQQAEQDCKVVLKYE---PQN-------IKALFRRAQARKMLMQYKESLEDLMTLLKLDPKNSAAKKEADVVKQYYKKQLTEMKSPGSSASLTRGKKITIEEVGSSSDDERKEAKKSPGKITQKITELKSTITKGIDGKRAGSPEKTPGKDKKQKEQVKKASTLVETSAGLP-KAAPSTPHLSSKPTPYEFMTAWNSLKGSTEIAPYAKILSQLKPKNIPK-----VLSNKLDGGMFSIIVKCVEDYNKEGKVVETLDILKFLSKVQRFDVIAMFMSSQEKQVLTDILSSLK 1016          
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A1U8AKY1_NELNU (RNA polymerase II-associated protein 3 isoform X1 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AKY1_NELNU)

HSP 1 Score: 79.7 bits (195), Expect = 9.250e-13
Identity = 93/334 (27.84%), Postives = 151/334 (45.21%), Query Frame = 0
Query:   29 EKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDN--------ATAKA--ELNMLRERYGVPPPILRSRSR----NYTGSDSKIK-----IVSESNDHTN--GVAPPPKISPPSLPFSEIRDETEILQLSNDTMQNLVLKWSSNE-------------------PHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQEI 322
            EKE GN  ++  +++EA+  YS + ++ P + V  ANRAM +LK+  +E A+ +        E+L  +DR      K   RRATA KEL     A ED +  L LE N        A +KA  +  +L++  G+    ++  +        G+D K       IV E    T   G     K S  S   + ++   +  + S+   +   LK S  E                   P +A +FE SWR L  D   QA+ LL+V+ P  + + L    L+ Q++  VV+ ++  + +      S    L   +++SRF MI+M LS++ER ++
Sbjct:  138 EKELGNEYFKQKKFNEAIDCYSRSIALMPTA-VAYANRAMAYLKIKRFEEAEDDCT------EALNLDDRY----IKAYSRRATARKELGKLKAAIEDAEFALRLEPNNQELKKQYAESKALYDKEILKKASGIARNAIQGETAAQVDRMKGTDGKFPSKPSIIVQEIKSKTTVGGTRSWIKESDGSQEDATLKSSADTFKGSHAVDKREELKTSVQELASRAASRAMAEAVKNITPPKSAYEFEVSWRGLSGDRALQAR-LLKVISPPTLPQ-LFKNALSAQILVDVVSCIATFIMEETDLAVS---FLDNLTKISRFSMIIMCLSALERDDL 455          
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A6F9DRU4_9ASCI (RNA polymerase II-associated protein 3-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DRU4_9ASCI)

HSP 1 Score: 77.0 bits (188), Expect = 6.570e-12
Identity = 87/330 (26.36%), Postives = 142/330 (43.03%), Query Frame = 0
Query:   28 EEKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLE-DNATAKAELNMLRERYGVPPPILRSRSRNYTGSD---------------SKIKIVSESNDHTNGVAPPPKISP----PSLPFSEIRDETEILQLSNDTMQNL---------VLKWSSNE--------PHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQ 320
            EEK KGN+  + GRY +AV+ Y+     +P + V PANRA+ FLKL  Y   +A+  ++  +  +            K  LRR +A K +     A  D++ VL LE DN  A+ ELN++ E  G       S S  ++G D               SK  +     +   G    PK++       +  S + D TE    S D M+ L         VL   S++        P T   F+   R +  +     KY+ ++    ++   L+ E L   ++  ++  L + +A N +      + L   ++V RF+M +MFLS  ++Q
Sbjct:  123 EEKTKGNDHLKHGRYDKAVECYTKGMQYDPENAVLPANRALAFLKLEKYIETEADCTLSLSMDPTY----------IKAYLRRGSARKAMTKIEGAIRDFKDVLKLEPDNKQARNELNII-ENQGKSESKKVSTSHKFSGDDKGNLVLPIKKPLHLQSKKPLRRIHVEEVGGEIKNPKVAECNQKQDIDISRM-DSTETKNPSQD-MKTLKPTNGQMKPVLNGQSHQTETTVPGVPSTFYQFQADIRKIGHNRTNLFKYVKQI--DPKLFPKLIKEQLETNILSAILGALMENIAGNENF---IVEFLTNLTKVKRFEMAVMFLSKSDQQ 434          
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A553PYD8_9TELE (RPAP3_C domain-containing protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553PYD8_9TELE)

HSP 1 Score: 75.9 bits (185), Expect = 2.020e-11
Identity = 79/331 (23.87%), Postives = 140/331 (42.30%), Query Frame = 0
Query:   29 EKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKAELNMLRERYG-----VPPPILRSRSRNYTGSDSKIKIVSESN----DHTNGVAPPPKISPPSLPFSEIRDETE---ILQLSNDTMQNLVLKWSSNEPHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQEITSFINSLERIDVAPALIESLRASY 346
            +K+ GN+ +++GR+  AV+ Y+     + M+ + PANRAM FLKL+ +  A+ +  +A  L  S            K   RRATA   L     A +D+  VL LE  N  A  EL  L E        VP  + + R+         ++              G +P  + +   +   E++   E   + +L     ++L  +     P ++   E   R ++        YL  +   Q ++  +    L P+LM +++     A A +        ++L   SRV RFDM +MF+SS E++ +      +E   +  + ++ L+  Y
Sbjct:  272 QKDNGNDHFKAGRFEAAVECYTKGMEADRMNALLPANRAMAFLKLHRFSEAEQDCCVALTLDPSY----------TKAFARRATARAALGNTEDARDDFMQVLKLEPGNKQALNELQKLSEEKQSNARLVPQEVAQRRTIRPIQKPEHLRSTKALRRMQIQEVTGASP--QSTAQQMRSPEVKSSCENRSMFELRIPENRSLEEQDVPPPPSSSFQLEADLRKIRHHTQLTHTYLKSIPPDQYLQ--IFQTNLEPELMMQILQSFHHAQAPSSEELCILLEVLKNLSRVRRFDMAIMFMSSAEKKMVQDLFAQIEGAGLTDSSVQDLQKRY 588          
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A1U7VY71_NICSY (RNA polymerase II-associated protein 3 isoform X6 n=14 Tax=Nicotiana TaxID=4085 RepID=A0A1U7VY71_NICSY)

HSP 1 Score: 74.7 bits (182), Expect = 3.790e-11
Identity = 86/310 (27.74%), Postives = 140/310 (45.16%), Query Frame = 0
Query:   27 DEEKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLE-DNATAKAELNMLRERYGVPPPILR---------SRSRNYTGSDSKIKIVSESNDHTNGVAPPPKISPPSLPFS----EIRDETEILQLSNDTMQNLVLKWSSNEPHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQEI 322
            + EKE GN  ++  ++ EA+  YS + +++P + V  ANRAM +LKL  ++ A+ +        E+L  +DR      K   RR+TA KEL     + ED +    LE  N   K +   ++  Y     IL+         ++    TG  +K   V +S   +  VA   KI P   P      E+++  + L     ++       +   P++A  FE SWR L  D   Q  +LL+V  P  + +     +  P LM  V  V + ++         A + L   ++V RFDMI+M LSS ++ E+
Sbjct:  128 NSEKELGNEFFKQKKFKEAIDCYSRSIALSPTA-VAYANRAMAYLKLKRFQEAENDCT------EALNLDDRY----IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALY--EKEILKRVSGATGVSAQGAQNTGKTNKTGPVIQSVGSSQKVAEVRKI-PAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQT-HLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDM----DLAIRYLENLTKVPRFDMIIMCLSSTDKAEL 418          
BLAST of Gvermi7083.t1 vs. uniprot
Match: D6WQY6_TRICA (RNA polymerase II-associated protein 3-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=D6WQY6_TRICA)

HSP 1 Score: 74.7 bits (182), Expect = 3.990e-11
Identity = 81/336 (24.11%), Postives = 145/336 (43.15%), Query Frame = 0
Query:   29 EKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKAELNMLRERYGVPPPILRSRSR---NYTGSDSK--IKIVSESND----------------HTNGVAPP--------------PKISPPSLPFSEIRDETEILQL------------SNDTMQNLVLKWSSNEPHTAADFERSWRSLKEDDLAQAKY-LLEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLS 315
            EK+KGN   +  ++ +A++ Y+ A  +    P+  ANRA+ FLK+ +YE+A+++  ++ +L ++            K   RRA A + L     A  D   VL+LE  N+ +K  L  L+++  +    + +  R    +T S +K   K+V + N+                H     P               PK+  P++      D+ ++++             S D   N+ ++ S   PH +  F  SWR LK  D    KY  L+++ P+ +   +  E L   +   ++ VL+K   +    G      L  F+++ RF  I+MFLS
Sbjct:  116 EKDKGNKFVKDKKWEQAIECYTKAIDLYSYDPIFYANRALCFLKIQNYEKAESDCTLSLKLDQTY----------VKAYQRRAAAREALNKLQDAKSDLLKVLELEPKNSESKTSLENLKKKLALVEKPVETSQRPVSKFTASRNKNLCKVVKQENNNESEPIILVKTVNKPVHLQSKKPLKRIEIQEISEIESFPKVDEPNVTLKT--DDLKVVERQPLGQNVHEIKESKDQRNNIKMELSV--PHNSVQFYSSWRHLKTLDF---KYEYLKLINPENLPL-IFKESLESSVFSEILEVLTKCFIER---GDDVFDFLKYFTQIRRFSAIIMFLS 430          
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A0H5QNV3_9EUKA (RPAP3_C domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QNV3_9EUKA)

HSP 1 Score: 74.3 bits (181), Expect = 4.640e-11
Identity = 85/328 (25.91%), Postives = 143/328 (43.60%), Query Frame = 0
Query:   20 PSLQRSFDEEKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDL--EDNATAKA-ELNMLRERYGVPPPILRSRSRNYTGSDSKIKIVSESNDHT---NGVAPPPKISPPSLPFSEIR-DETEILQLSNDTMQNLVLKWSSNEPHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQRVV---AVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQEITSFINSLERIDVAPA 337
            PS     ++ +EKGN  +R+G+YHEAV  YS    INP+     ANRA  +L L  Y  A+ + +      +            AK+LLRR TA   L     A  D++ V  +   D+ +AKA + ++   R  +  P  ++ ++ +      I+ VS S+D     +G    P I+  S   S ++ D    +  S+ T+  L        P T+ +FE  +RSL  D      +L+++              L P+L   V+    ++   ++ + S    A  IL   S V RF +++MF +  ++ E+      L   D + A
Sbjct:  109 PSATHFAEDIREKGNERFRTGKYHEAVGLYSQCVEINPLDLKALANRAAAYLNLKRYADAENDCSAVLAADKDN----------AKVLLRRGTARTSLKKMLSAIMDFEQVSAVCGPDHPSAKAAQQHIATIRSYLSKPKSKTPAQKFPRRRLVIEEVSGSSDDXXDCDGSEGSPAIATVSNAISSLKPDSIAAVVKSSSTVGALPPC-----PKTSYEFEHVFRSLHRDAGRLFSFLIQIP-----------VALYPRLFCTVIDADVIMDCLLSIDSSNLPGALNILRGLSTVDRFGIMIMFFNDQQKMEVRDLFRRLYNADPSTA 410          
BLAST of Gvermi7083.t1 vs. uniprot
Match: A0A843ULE6_COLES (RPAP3_C domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843ULE6_COLES)

HSP 1 Score: 74.3 bits (181), Expect = 4.980e-11
Identity = 89/316 (28.16%), Postives = 141/316 (44.62%), Query Frame = 0
Query:   29 EKEKGNNAYRSGRYHEAVQHYSAAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKAELNMLRERYGVPPPILRSRS---RNYTGSDSKIKI------VSESNDHTNG---VAPPPKISPPSLPFSEIRDETEILQLSNDTMQNLVLKWSSNE---PHTAADFERSWRSLKEDDLAQAKYLLEVVGPQRIERGLLGEILTPQLMQ--RVVAVLSKAVAQNRSCGTSAAKILIAFSRVSRFDMILMFLSSMERQEITSFIN 327
            EKE GN  ++   + +AV+ YS + +++P S V  ANRAM +LK+  YE A+ + +      E+L  +DR      K   RRATA KEL    L+ ED +  L LE N      L    +       + R      R   G + K  I      VSE N   +G   +A     S     F++ +++  ++        +L +  +      P +A +FE SWR +  D   QA  +L+ + P  + +     +  P L++  +  A   K   +       A  IL   +RVSRFDMI+M  S+++R E+    N
Sbjct:  115 EKELGNEYFKQKNFPKAVECYSRSIALSPTS-VAFANRAMAYLKMKRYEEAETDCS------EALNLDDRY----VKAYSRRATARKELGKLKLSLEDSEFALRLEPNNQELRRLYTETKALYNDEVVKRMSGEVKRPTQGPEGKGVIELEAGNVSEINSMASGSQMIASTSICSSNEKIFAKKQEQKPLVHELPFRAASLAMSTAPRNLTPPKSAYEFEVSWRHVSSDCSMQAN-ILKSIPPDSLPQLFKNALSAPMLIEIIKCTATFFKGELEL------AISILENLTRVSRFDMIVMCFSALDRAELLRIWN 412          
The following BLAST results are available for this feature:
BLAST of Gvermi7083.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INK9_9FLOR1.430e-14764.57RNA polymerase II-associated protein 3 n=1 Tax=Gra... [more]
UPI000180C5031.140e-1323.99RNA polymerase II-associated protein 3-like n=1 Ta... [more]
A0A8J1UAN7_OWEFU5.810e-1324.85Ofus.G112090 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A1U8AKY1_NELNU9.250e-1327.84RNA polymerase II-associated protein 3 isoform X1 ... [more]
A0A6F9DRU4_9ASCI6.570e-1226.36RNA polymerase II-associated protein 3-like n=1 Ta... [more]
A0A553PYD8_9TELE2.020e-1123.87RPAP3_C domain-containing protein n=1 Tax=Danionel... [more]
A0A1U7VY71_NICSY3.790e-1127.74RNA polymerase II-associated protein 3 isoform X6 ... [more]
D6WQY6_TRICA3.990e-1124.11RNA polymerase II-associated protein 3-like Protei... [more]
A0A0H5QNV3_9EUKA4.640e-1125.91RPAP3_C domain-containing protein (Fragment) n=1 T... [more]
A0A843ULE6_COLES4.980e-1128.16RPAP3_C domain-containing protein n=1 Tax=Colocasi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 60..93
e-value: 480.0
score: 0.2
coord: 104..137
e-value: 29.0
score: 10.8
coord: 26..59
e-value: 13.0
score: 14.0
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 226..319
e-value: 5.2E-16
score: 59.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 21..134
e-value: 3.5E-20
score: 74.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 26..138
NoneNo IPR availablePANTHERPTHR46423RNA POLYMERASE II-ASSOCIATED PROTEIN 3coord: 26..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1556397..1557440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7083.t1Gvermi7083.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1556397..1557440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7083.t1 ID=Gvermi7083.t1|Name=Gvermi7083.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=348bp
MDLGTEEQLLQLSLTGRLPPSLQRSFDEEKEKGNNAYRSGRYHEAVQHYS
AAESINPMSPVPPANRAMVFLKLNDYERAKAEAAIAYELHESLPQEDRSK
RLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKAELNMLRERY
GVPPPILRSRSRNYTGSDSKIKIVSESNDHTNGVAPPPKISPPSLPFSEI
RDETEILQLSNDTMQNLVLKWSSNEPHTAADFERSWRSLKEDDLAQAKYL
LEVVGPQRIERGLLGEILTPQLMQRVVAVLSKAVAQNRSCGTSAAKILIA
FSRVSRFDMILMFLSSMERQEITSFINSLERIDVAPALIESLRASYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR025986RPAP3-like_C
IPR011990TPR-like_helical_dom_sf