Gvermi7050.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7050.t1
Unique NameGvermi7050.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length293
Homology
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BLAST of Gvermi7050.t1 vs. uniprot
Match: A0A2V3IJ67_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ67_9FLOR)

HSP 1 Score: 207 bits (526), Expect = 4.310e-62
Identity = 110/264 (41.67%), Postives = 145/264 (54.92%), Query Frame = 0 
Query:   33 AVIHFAANDAAILYLNGKPKSYVSDWRAHRRVVLNVRKGNVIAFKATNRKDEYGFIANIRIGKKNFPTGSKYWRATHGGVQSGDWMRKAKGFCWHRPMLVPAKRFRQCSAFPRHIKARYVWACRSSPGIRTMTLLRFVVGGDSCGRK-----PVDDFHMPSMTPTPSPSSEKTYIDGAGDEDPRTTCKCELVDNINGLCYYFLDPSARSGRCMSRKCAQSYQCKEDGSILCIKKYVLEKVVPLSDTT--NCVIAKTRDPVWIPY 289
            A IH AANDAA LY+NG  K  V +      VV  ++ G+V+A KA N +  YG I +I I   ++ TG + WRA   G+ +  WM    GFCW  P+L P +   +   FP    ARYVWA   SPG +  TLLR VVGGD C        PVDDF      P+         I GA ++D RT C CEL     G CY FL+ + ++G C+SR C +SY C E+   +CI++YV EK+VPLS+T    C I  + +  W+PY
Sbjct:   29 AKIHMAANDAAKLYVNGIRKISVFNNMRTESVVTKLKSGDVVAVKAINIRGWYGVIVDIEINGVHYYTGGQGWRARQAGITTNAWMTSKTGFCWDAPILSPERNQEKSLDFPYENGARYVWASSLSPGSKDSTLLRIVVGGDDCDSSLNSALPVDDFSQSHQKPS-------DLISGANEQDRRTVCNCELAPERKGRCYAFLNHNLKAGYCVSRPCKRSYHCVENAPTMCIRRYVAEKIVPLSNTDPLQCTIRASGEFKWVPY 285
The following BLAST results are available for this feature:
BLAST of Gvermi7050.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJ67_9FLOR4.310e-6241.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 21..129
e-value: 4.9E-6
score: 28.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1309062..1309940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7050.t1Gvermi7050.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1309062..1309940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7050.t1 ID=Gvermi7050.t1|Name=Gvermi7050.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=293bp
MKSVCILLLVSFLVNLSEASGTKTVKEAWPKKAVIHFAANDAAILYLNGK
PKSYVSDWRAHRRVVLNVRKGNVIAFKATNRKDEYGFIANIRIGKKNFPT
GSKYWRATHGGVQSGDWMRKAKGFCWHRPMLVPAKRFRQCSAFPRHIKAR
YVWACRSSPGIRTMTLLRFVVGGDSCGRKPVDDFHMPSMTPTPSPSSEKT
YIDGAGDEDPRTTCKCELVDNINGLCYYFLDPSARSGRCMSRKCAQSYQC
KEDGSILCIKKYVLEKVVPLSDTTNCVIAKTRDPVWIPYSKQ*
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