Gvermi7037.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7037.t1
Unique NameGvermi7037.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length619
Homology
BLAST of Gvermi7037.t1 vs. uniprot
Match: A0A2V3IJA3_9FLOR (BRK domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJA3_9FLOR)

HSP 1 Score: 482 bits (1241), Expect = 1.750e-158
Identity = 325/706 (46.03%), Postives = 369/706 (52.27%), Query Frame = 0
Query:  158 GRKIAGNAAPLAKNLDDYLRKHPHCERYNGQDRATRYTQHRRILPVGANVPHPRAPPPHMVLPMQTVLPLPLQGYP-STNPLHLPLHLVSYPMPLDPANVQLYNPQQR-PAYFVPHYPV-------PADPAQHHPHPQSHSS----------------NKRLNHPPALAATPFAVPAADQPAPL-------------------HP----------KLARHAAESTVANALANANAQMRAHA-------------------NCTVPT----------------------------------------------------------------------------------------------------------------------SHPRLSAMT-----------------------------------------------------LSDSLSQALDLNTTQLSSDAAKNERKQLADDIDKVLNSAGMSVGLSNPCTISPSTANHLFDASCRWNNDRNPASVSRSLSFMLKNNAPFASRENSMDFRKGDFGA-KREMSMDMIRRDISMDLLSARRIGSQERIGGELVRDMSIDFFGGSLRNANRDFSMEMQFPTDYNGAQSGAVFELGSLADDAVFGQPLQSLPAPSKSEHNGAATEGRDSRFPRSKIGMSQDDLMVHVLANQGVHQQFRRTVNGSVEDLRELKMPF 618
            GRKIAGNAAPL KNLDDYLRKHPHCERYNGQDRATRYTQHR+ILPVGAN+ H R P   +VLP+QTVLPLP+Q YP STNP+HLP+ L+SYP+PLD +N+ LYNPQ R P+YFVPHYPV       P+    HH  PQ   S                 +  +H P  AA P ++P  +   P                    HP          KLAR AAESTVANA+A ANAQMR HA                   N T P                                                                                                                       S P+ SA+T                                                     LS+SL++ +D++  Q S D AKN RKQ ADDIDKVLNSAG S  LS+ CT+SPS AN +FD S R NN +N ASVSRS SF+ K+ APFASRENSMDFRK D G  KREMSMDMIRRDISMDLL +RRIGSQERI GELVRDMSID FG SLRN NRDFSM+MQFPTD N AQSGAV ELG+  DD  FG P   L   S+++ N +A EGRD++FPRSKIGMSQDDLMVHVLANQG HQQ+RR VNGS+EDLRELKMPF
Sbjct:   65 GRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRKILPVGANINHLRPPATPVVLPLQTVLPLPVQTYPPSTNPVHLPVQLMSYPLPLDASNLHLYNPQHRHPSYFVPHYPVNPDLSHPPSTAPSHHSLPQQAPSXXXXXXXXXXPALSQPQQTPHHKPQPAAAPHSLPLHNMHKPKXXXXPSQPYLPNPNTFSNPHPIMRDQLAVDTKLARQAAESTVANAIAKANAQMRGHARMHPNLAPHNPHLQFHHPTNTTSPATDSDPSLNSSTPPASSLSSATPKSNDDKSGPVHLSPTQLFKDMKDLLQKKAEQTSRAQNPDFVPKKPAPSMPPQHEMPVVSNPEARLHTHAALQQTAQPDQRVHHPVSQSSAPLSQQFSPPQSSALTAFDVDAATFQLAGTRIDEPEASPITTDTPALATLEVGLVVPSASQDLMPSNMSLSESLAEGIDIHALQFSMDDAKNARKQRADDIDKVLNSAGTSGALSHHCTLSPSFANQMFD-SARLNNGKNSASVSRSFSFLFKSGAPFASRENSMDFRKCDLGGGKREMSMDMIRRDISMDLLFSRRIGSQERIDGELVRDMSIDCFGNSLRNTNRDFSMDMQFPTDSNPAQSGAVLELGAFTDDVAFGLPFHGLQQ-SRADLN-SANEGRDAKFPRSKIGMSQDDLMVHVLANQGAHQQYRRNVNGSIEDLRELKMPF 767          
BLAST of Gvermi7037.t1 vs. uniprot
Match: A0A2V3IJ94_9FLOR (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ94_9FLOR)

HSP 1 Score: 190 bits (482), Expect = 7.970e-51
Identity = 96/157 (61.15%), Postives = 120/157 (76.43%), Query Frame = 0
Query:    1 MAYAMRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRT 157
            M+YAM H TQ+VYPHD+A++ ALL LRPG VV ECGTGS +A++AFA AVAP GRVL+FE+H  RA AA  L ++L+L  V+SV   VDV++ GF  V DAS DAVFLDVPAP+ +  + RR+LR NG +C FSPCVEQV RTCA LR+  F+ +RT
Sbjct:   89 MSYAMLHRTQIVYPHDSAIIAALLELRPGSVVVECGTGSGSASMAFARAVAPTGRVLTFEYHHVRAKAARQLFQSLQLSHVLSVSAGVDVLKDGFVGVQDASADAVFLDVPAPYEMGHQLRRVLRPNGTVCTFSPCVEQVGRTCAMLRKMRFHSLRT 245          
BLAST of Gvermi7037.t1 vs. uniprot
Match: R7QRE0_CHOCR (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRE0_CHOCR)

HSP 1 Score: 164 bits (414), Expect = 3.070e-41
Identity = 85/154 (55.19%), Postives = 107/154 (69.48%), Query Frame = 0
Query:    4 AMRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRT 157
            AM H TQ+VYPHD+AV+   L LRPG V+ E GTGS +A++AFA AVAP G+V SFEFH+ RA AA    RAL L  VV V   VDVV+ GF  V D   DAVFLD+PAP+L+  E  R+L+ NG +C FSPC+EQV ++    R+ PF+ +RT
Sbjct:   92 AMFHRTQIVYPHDSAVITLFLDLRPGQVLIESGTGSGSASVAFARAVAPLGQVRSFEFHKPRADAAQKDFRALGLEHVVKVTGGVDVVKQGFLGVNDGEADAVFLDLPAPYLMGEEVARVLKPNGTVCTFSPCLEQVQKSAEMFRKGPFHSVRT 245          
BLAST of Gvermi7037.t1 vs. uniprot
Match: E1ZMG6_CHLVA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZMG6_CHLVA)

HSP 1 Score: 132 bits (332), Expect = 1.420e-30
Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 0
Query:    5 MRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRTG----RKIAGNAAPLAKNLDDYL 176
            +RH TQ++Y  D A+V A L LRPG VV E GTGS +   + A AVAPHG+V +FEFH QRA  A    +A  L  +V+V    D+   GF        DA+FLD+P P+++V  A R +R +G  C+FSPC+EQV RTC  L    F D+RT     R++  +   LA +L+  +
Sbjct:   85 LRHRTQILYAADIAMVVAFLELRPGAVVLESGTGSGSLTTSLARAVAPHGKVWTFEFHEQRAQLAAEEFKANGLGELVTVAQR-DIEASGFPEELHGQADALFLDLPKPYMVVPSAARCVRPDGMFCSFSPCIEQVQRTCQELNAHGFRDMRTMEVLLRQLEVSRQALATDLESSM 259          
BLAST of Gvermi7037.t1 vs. uniprot
Match: A0A6B2LC00_9EUKA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LC00_9EUKA)

HSP 1 Score: 129 bits (325), Expect = 5.970e-30
Identity = 68/173 (39.31%), Postives = 108/173 (62.43%), Query Frame = 0
Query:    4 AMRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRTGRKIAGN--AAPLAKNLDD 174
            AM H T+++Y  D +++   L ++PG  V E GTGS + + AFA ++AP+G + ++EFH++RA AA    +  ++  +++V+ A D    GF+  PD SVDA+FLD+P+P+L+   A + LR NG LC+FSPC+EQV + C  L    F +I T   +  N     +A+ L+D
Sbjct:   66 AMNHRTEILYSGDISLILLQLEIKPGSTVVESGTGSGSLSTAFARSLAPNGHLYTYEFHQERAEAAKVDFQKNKVDHLITVKCA-DACEDGFSDRPDGSVDAIFLDLPSPWLVAPNANKRLRANGKLCSFSPCIEQVQKMCESLTTSGFSEITTVECLVRNYEVKNIAEELED 237          
BLAST of Gvermi7037.t1 vs. uniprot
Match: A0A2P6VHZ9_9CHLO (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VHZ9_9CHLO)

HSP 1 Score: 125 bits (315), Expect = 6.370e-28
Identity = 74/153 (48.37%), Postives = 91/153 (59.48%), Query Frame = 0
Query:    5 MRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRT 157
            +RH TQ++Y  D A+V ALL LRPG VV E GTGS +   + A AVAP G V +FEFH QR+  A     A  L  VV+V    D+   GF        DAVFLD+P P  +V  A R +R +G  C+FSPC+EQV RTC  L  + F DIRT
Sbjct:   87 LRHRTQILYAADIAMVVALLELRPGAVVLESGTGSGSLTHSLARAVAPAGHVWTFEFHEQRSQLAREEFAANGLGGVVTVTQR-DIEEGGFPEALHGKADAVFLDLPGPQKVVPSAARCVRPDGMFCSFSPCIEQVQRTCEALNSQGFRDIRT 238          
BLAST of Gvermi7037.t1 vs. uniprot
Match: A0A1X6NP81_PORUM (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NP81_PORUM)

HSP 1 Score: 124 bits (310), Expect = 4.590e-27
Identity = 72/143 (50.35%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    9 TQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREP 151
            T VVY HDAA++   L L PG V+ E GTGS    +  AAAVAP GRV +++FH  R+AAA A   AL +  VV+VR  VDV   GF  V D   DAVFLD+P P  ++  A R L  +G LC FSPC+EQV+RT   L   P
Sbjct:  126 TAVVYVHDAALIGLKLELTPGAVIVEAGTGSGGLTVPLAAAVAPTGRVHTYDFHAGRSAAAAADFAALGVAPVVTVRGGVDVAAAGFVGVADGDADAVFLDLPDPGGVLPHAARALAPDGRLCCFSPCIEQVARTVGVLSAAP 268          
BLAST of Gvermi7037.t1 vs. uniprot
Match: K3Y8L3_SETIT (tRNA (adenine(58)-N(1))-methyltransferase n=8 Tax=Paniceae TaxID=147428 RepID=K3Y8L3_SETIT)

HSP 1 Score: 120 bits (300), Expect = 3.560e-26
Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 0
Query:    5 MRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRT 157
            + H TQ++Y  D ++V A L L PG VV E GTGS +   + A AVAPHGRV +F+FH QRAA+A    +   L  +++V    D+   GF     A+ DAVFLD+P P+L +     +L+++G LC+FSPC+EQV R C  +R   F DIRT
Sbjct:  105 LSHRTQILYIADISLVVAYLELVPGCVVLESGTGSGSLTTSLARAVAPHGRVHTFDFHEQRAASAREDFKRNGLSSLITVNVR-DIQGEGFPEEHRAATDAVFLDLPQPWLAIPSVGSMLKQDGILCSFSPCIEQVQRACEAMR-SCFTDIRT 255          
BLAST of Gvermi7037.t1 vs. uniprot
Match: A0A199VYX0_ANACO (tRNA (adenine(58)-N(1))-methyltransferase n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A199VYX0_ANACO)

HSP 1 Score: 119 bits (299), Expect = 3.910e-26
Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    5 MRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRT 157
            + H TQ++Y  D + V + L + PG VV E GTGS +   + A AVAP G V +F+FH QRAA+A        L  +++V    D+   GF      S+DA FLD+P P+L +  A R+L+++G LC+FSPCVEQV RTC+ LR   F DIRT
Sbjct:   86 LSHRTQILYIADISFVISYLEIVPGCVVLESGTGSGSLTTSLARAVAPSGHVFTFDFHEQRAASAREDFERNGLSGLITVNVR-DIQGEGFPAEHSGSIDAAFLDLPQPWLAIPSAVRMLKQDGVLCSFSPCVEQVQRTCSTLRSN-FTDIRT 236          
BLAST of Gvermi7037.t1 vs. uniprot
Match: A0A0D9W3G6_9ORYZ (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9W3G6_9ORYZ)

HSP 1 Score: 119 bits (299), Expect = 4.660e-26
Identity = 68/153 (44.44%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    5 MRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAVAPHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPDASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRREPFYDIRT 157
            + H TQ++Y  D ++V + L L PG VV E GTGS +   + A AVAPHGRV +F+FH QRAA+A        L  +++V    D+   GF      + DAVFLD+P P+L +  A  +L+++G LC+FSPC+EQV R C  +R   F DIRT
Sbjct:  103 LSHRTQILYVADISLVVSYLELVPGCVVLESGTGSGSLTTSLARAVAPHGRVCTFDFHEQRAASAREDFERNGLTSLITVAVR-DIQGQGFPQEHTGAADAVFLDLPQPWLAIPSAGTMLKQDGVLCSFSPCIEQVQRACEAMRPS-FTDIRT 253          
The following BLAST results are available for this feature:
BLAST of Gvermi7037.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJA3_9FLOR1.750e-15846.03BRK domain-containing protein n=1 Tax=Gracilariops... [more]
A0A2V3IJ94_9FLOR7.970e-5161.15tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=... [more]
R7QRE0_CHOCR3.070e-4155.19tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=... [more]
E1ZMG6_CHLVA1.420e-3043.18tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=... [more]
A0A6B2LC00_9EUKA5.970e-3039.31tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=... [more]
A0A2P6VHZ9_9CHLO6.370e-2848.37tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=... [more]
A0A1X6NP81_PORUM4.590e-2750.35tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=... [more]
K3Y8L3_SETIT3.560e-2645.10tRNA (adenine(58)-N(1))-methyltransferase n=8 Tax=... [more]
A0A199VYX0_ANACO3.910e-2645.10tRNA (adenine(58)-N(1))-methyltransferase n=3 Tax=... [more]
A0A0D9W3G6_9ORYZ4.660e-2644.44tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 377..397
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 2..192
e-value: 1.6E-45
score: 157.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..578
NoneNo IPR availablePANTHERPTHR12133:SF2TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE CATALYTIC SUBUNIT TRMT61Acoord: 4..164
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PFAMPF08704GCD14coord: 4..157
e-value: 9.2E-42
score: 143.4
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PANTHERPTHR12133TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASEcoord: 4..164
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PROSITEPS51620SAM_TRM61coord: 1..157
score: 37.899551
IPR006576BRK domainPFAMPF07533BRKcoord: 153..180
e-value: 1.6E-7
score: 30.8
IPR037259BRK domain superfamilySUPERFAMILY160481BRK domain-likecoord: 153..189
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 3..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1106841..1110636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7037.t1Gvermi7037.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1106841..1110636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7037.t1 ID=Gvermi7037.t1|Name=Gvermi7037.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=619bp
MAYAMRHHTQVVYPHDAAVVRALLALRPGMVVAECGTGSAAAALAFAAAV
APHGRVLSFEFHRQRAAAATALLRALRLHRVVSVRPAVDVVRHGFAHVPD
ASVDAVFLDVPAPFLLVAEARRILRRNGALCAFSPCVEQVSRTCARLRRE
PFYDIRTGRKIAGNAAPLAKNLDDYLRKHPHCERYNGQDRATRYTQHRRI
LPVGANVPHPRAPPPHMVLPMQTVLPLPLQGYPSTNPLHLPLHLVSYPMP
LDPANVQLYNPQQRPAYFVPHYPVPADPAQHHPHPQSHSSNKRLNHPPAL
AATPFAVPAADQPAPLHPKLARHAAESTVANALANANAQMRAHANCTVPT
SHPRLSAMTLSDSLSQALDLNTTQLSSDAAKNERKQLADDIDKVLNSAGM
SVGLSNPCTISPSTANHLFDASCRWNNDRNPASVSRSLSFMLKNNAPFAS
RENSMDFRKGDFGAKREMSMDMIRRDISMDLLSARRIGSQERIGGELVRD
MSIDFFGGSLRNANRDFSMEMQFPTDYNGAQSGAVFELGSLADDAVFGQP
LQSLPAPSKSEHNGAATEGRDSRFPRSKIGMSQDDLMVHVLANQGVHQQF
RRTVNGSVEDLRELKMPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014816tRNA_MeTrfase_Gcd14
IPR006576BRK_domain
IPR037259BRK_sf
IPR029063SAM-dependent_MTases