Gvermi7028.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi7028.t1 vs. uniprot
Match: A0A2V3IR84_9FLOR (DNA-directed RNA polymerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR84_9FLOR) HSP 1 Score: 140 bits (354), Expect = 2.120e-36 Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 0
Query: 12 DLKDALAVADVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPSKEDVMKEQLAAFERRKVEMMEWQEQEGGECNDEDMVFDEKKAYIRLRAER 120
DL+DALA AD+STLFDGLNAL DQ WR N ++Y+VA ELW +GGG AG VTK++ +VPSK D M+EQ+ AFERRK EMM W+ QE + +E+ VFDEKKA +LR ER
Sbjct: 379 DLQDALAGADLSTLFDGLNALGDQAWRVNEDVYEVADELWSRGGGTAGLVTKSNAKVPSKADFMEEQIKAFERRKEEMMAWRAQEESDGEEEEPVFDEKKATRKLRMER 487
BLAST of Gvermi7028.t1 vs. uniprot
Match: R7QN31_CHOCR (DNA-directed RNA polymerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN31_CHOCR) HSP 1 Score: 95.1 bits (235), Expect = 2.360e-20 Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 0
Query: 13 LKDALAVADVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPSKEDVMKEQLAAFER-RKVEMMEWQEQEGGECNDEDMVFDEKKAYIRLRAER 120
L+ AL AD+S L+ GLNAL D W NR + DVA+ LW GGG AG VTK D+ VP+K+ M EQLAAF+ +++ EG ++E+ +FDE KA RLR ER
Sbjct: 359 LERALNGADLSLLYQGLNALGDTAWTVNRGVLDVAETLWENGGGKAGLVTKQDVAVPNKKKFMAEQLAAFQDDKRLGRPPSDFVEGDVVDEEEYIFDEGKASRRLRFER 467
BLAST of Gvermi7028.t1 vs. uniprot
Match: M2X4M7_GALSU (DNA-directed RNA polymerase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X4M7_GALSU) HSP 1 Score: 67.0 bits (162), Expect = 1.680e-10 Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 15 DALAVADVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVP 69
+AL A++S +++GLNAL PW+ N I +VA+ELWR+GGG+AG V + I+VP
Sbjct: 591 NALRTANLSKVYEGLNALGATPWKVNTKILEVAEELWRRGGGIAGLVNRERIDVP 645
BLAST of Gvermi7028.t1 vs. uniprot
Match: A0A388LVQ9_CHABU (DNA-directed RNA polymerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LVQ9_CHABU) HSP 1 Score: 58.2 bits (139), Expect = 2.140e-7 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0
Query: 13 LKDALAVADVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVP----SKEDVMKEQLAAFERRKV 87
LK A + ++ LNAL PWR N+ + V +E+W +GGG+AG V++ D E+P S++D + A F KV
Sbjct: 837 LKRATYRKTMKPVYQALNALGSTPWRVNKKVAQVVEEIWEKGGGLAGMVSRKDEELPLPPASRDDDAGRRAAKFAASKV 915
BLAST of Gvermi7028.t1 vs. uniprot
Match: UPI0017832901 (hypothetical protein n=1 Tax=Ensifer sp. ENS04 TaxID=2769281 RepID=UPI0017832901) HSP 1 Score: 56.2 bits (134), Expect = 9.790e-7 Identity = 22/57 (38.60%), Postives = 36/57 (63.16%), Query Frame = 0
Query: 15 DALAVADVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPSK 71
D D+ +++ LN + + PW+ NR +YDVA+++W G+A F TK + EVPS+
Sbjct: 297 DDFEALDMPEVYEALNRVQETPWKINRRVYDVAEQVWDMDLGIANFPTKENEEVPSR 353
BLAST of Gvermi7028.t1 vs. uniprot
Match: F4INQ5_ARATH (DNA-directed RNA polymerase n=3 Tax=Camelineae TaxID=980083 RepID=F4INQ5_ARATH) HSP 1 Score: 55.8 bits (133), Expect = 1.340e-6 Identity = 21/47 (44.68%), Postives = 30/47 (63.83%), Query Frame = 0
Query: 25 LFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPSK 71
+F+ L+ L + WR NRNI DV + LW GG +AG V + D+ +P K
Sbjct: 470 VFEALDTLGNTKWRVNRNILDVVERLWADGGNIAGLVNREDVPIPEK 516
BLAST of Gvermi7028.t1 vs. uniprot
Match: RPOT3_ARATH (DNA-directed RNA polymerase 3, chloroplastic n=39 Tax=Brassicaceae TaxID=3700 RepID=RPOT3_ARATH) HSP 1 Score: 55.8 bits (133), Expect = 1.350e-6 Identity = 21/47 (44.68%), Postives = 30/47 (63.83%), Query Frame = 0
Query: 25 LFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPSK 71
+F+ L+ L + WR NRNI DV + LW GG +AG V + D+ +P K
Sbjct: 470 VFEALDTLGNTKWRVNRNILDVVERLWADGGNIAGLVNREDVPIPEK 516
BLAST of Gvermi7028.t1 vs. uniprot
Match: Q0QFS1_9EUKA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Stygamoeba sp. ruffled TaxID=373142 RepID=Q0QFS1_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 2.430e-6 Identity = 22/57 (38.60%), Postives = 37/57 (64.91%), Query Frame = 0
Query: 21 DVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPSKEDVMKE 77
D+S ++ L+ LS PW+ N+ + VAQELW++GGG+ ++TD+ +P D K+
Sbjct: 139 DLSNVYRSLDELSAVPWKINKRVLRVAQELWQRGGGIGDLPSRTDLPLPEAPDNYKD 195
BLAST of Gvermi7028.t1 vs. uniprot
Match: A0A7S1ZZ68_TRICV (DNA-directed RNA polymerase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ68_TRICV) HSP 1 Score: 54.3 bits (129), Expect = 3.680e-6 Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 0
Query: 14 KDALAVADVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPS--KEDVMKEQLAAF-----ERRKVEMMEW 92
K+AL +AD++T++ GLN L PW N+ D A+ W +G + ++TD EVP + KE+ A+ E KVE EW
Sbjct: 139 KEALKLADLTTVYSGLNVLGSVPWVINKFTLDAARRCWEEGISLGDIPSRTDFEVPPLPERPEGKEKGRAYTEEEKEAFKVEYREW 224
BLAST of Gvermi7028.t1 vs. uniprot
Match: A0A151Z5F9_9MYCE (DNA-directed RNA polymerase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z5F9_9MYCE) HSP 1 Score: 53.5 bits (127), Expect = 8.680e-6 Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 0
Query: 20 ADVSTLFDGLNALSDQPWRTNRNIYDVAQELWRQGGGVAGFVTKTDIEVPSKED 73
AD++ ++DGLNAL + PW N+ +Y V E W GGG+ ++D E+P D
Sbjct: 435 ADLTHIYDGLNALGETPWVINQKVYKVINECWVNGGGLGEIPKRSDHELPQIPD 488 The following BLAST results are available for this feature:
BLAST of Gvermi7028.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi7028.t1 ID=Gvermi7028.t1|Name=Gvermi7028.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=121bpback to top |