Gvermi7022.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7022.t1
Unique NameGvermi7022.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length903
Homology
BLAST of Gvermi7022.t1 vs. uniprot
Match: A0A2V3J5G8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G8_9FLOR)

HSP 1 Score: 1142 bits (2954), Expect = 0.000e+0
Identity = 598/892 (67.04%), Postives = 713/892 (79.93%), Query Frame = 0
Query:    1 MSQIQQEAITLVSDAISGADGNLLPAIDTASEKWQIELRDAQSTARKLLAQVLEERETLRKSLASAADLWYILQP------DFPADDPNDEAQQPPDFCEGSFPATPAQLSAVRALHNISQTLFWAEFTMEAPSALELATTHLENIHGNGLDKVVKGNPALLVDAHAHLTAAERLRDLILLEIPTPSENPNPVKWFSKAAETRHLLEDIVLRGIFRNVVQLSQVNPCILVAGARVVESEEAEDEWWTDHIHKNALEERGAVVRAFGTHDYKKRALNAIVESLQAQFWQRERELRTFKNQMANSDNDISPNLDREFHVSSILEWIEQRRSETEIVRRYVTPCLPPSFQVSQLYESELHRQFMRLLSQLLHLNNADGSMLLSEVDLIKLTSWYSKYRSEVDEQSESIDCFLGEKDRRRLIVALQQHCARSVIASITSQICPQEHVDVGVEAKQHSAAKRKRLRVSKAVLCRGDLSQVIMDCVGEQVRQMLDLKMRDLDQAIAQVVSDILIDFQTEVRQVIANDKIDCTAEDGGSYLCATANHMAKCLGFSEELRDSFIPLGLDHHRPEIEERMESVIDGFRSTAAEAIHFLIDGMKPSLEMHVTRLFAPSTGTEVVLDMLAVLADYFKDYKKALLDYHFEYLAIETLKRVVVWYLVPFLRLTHPRLDESVARRYTSLPTFEDQTEDVEEISQNVSRRLSTRRSDASSRGVLSSTAGLASMSGGAVLALVEKDISNISAFMDKQVPLHQRKQLKPALEPLWAIQALYSCDSTAPAMAEAFRDAKLMIDRALRPLWAMEYGAHGQFGLRNAEKIWETRHDLSPSVIVEAINMCRINIDRIDTH-TPSRMSSVDDGRIWSSRYSDPNGSFSEXXXXXXXXXXXQNLSSSSLVWTPRS 885
            MS +++EA+  VS AIS  D NLL AID+A ++WQ+EL DA+STARKLLA VLEERETLR SLASAADLW ILQP      +F  DD   E          +FPA+ AQLSA  AL N++QTLFWAEF MEAP AL+ ATT+LE +H +GLDKVVKG+PALLVDAHA+LTAAERLRDLILLE P   +  NP +WFS+A ETR LLE+IVLRGIF NVVQLSQ NPCILVAGARVVESEEAED+WW  HI +N LE+R A VR+FG HDYKKRALNAIVE+LQAQFWQRERELR F++++    ++         HVSSIL+WI+QRRSETEI+RR+VTPCLPPSF+V+ +YE ELHRQFMRL+SQLLHLN  DGSM LSE DLI++TSWYSKYR+EV EQ E+IDCFL EKDR+RLI AL+QHCA+ + ++++S I  +   D     K  S  ++K++++SK++L R DLS+VIM+ VGEQV+++LDLKMRDLDQAIAQVV++IL+DFQT               E+ G YLCATANHMAKCL FSEELRDSFIPLGLDHHRPEIEERMESVI+GFRSTA+ A+H LIDG+KP+LE H TRLFAPSTGTEV+LD+LAVL D+F  Y+KALLDYHFEYLAIETLKRVVVWYLVPFLRLTHPRLDES ARR+TSLP+F+DQ+ED    + N+ R + TRR ++++   L+S AGLASM+GGAVLA +EKDI NI+AFM  +VPLHQ+KQLKP LEPL+AI+ALY+C +T  AMAEA R+AK+ +DRALRPLW MEYGA GQF LR AEKIWE R D+S S + EA+N+ RI++DRI+   TPSRMSSVDDGR+WSSRYSD NGSFSE           QNLSSSSL+WTPRS
Sbjct:    1 MSGLREEAVKAVSQAISETDSNLLTAIDSAYDRWQLELDDAKSTARKLLADVLEERETLRNSLASAADLWRILQPSSILADEFSNDDVASELNL---INNDAFPASSAQLSAASALQNVTQTLFWAEFIMEAPQALQRATTYLEKVHSDGLDKVVKGSPALLVDAHANLTAAERLRDLILLESPISPDKSNPAQWFSQAVETRDLLENIVLRGIFGNVVQLSQTNPCILVAGARVVESEEAEDDWWKTHIQRNGLEDRRAAVRSFGAHDYKKRALNAIVEALQAQFWQRERELRLFRDELTRKGSETKAVPKYHIHVSSILDWIQQRRSETEIIRRFVTPCLPPSFEVTAVYERELHRQFMRLISQLLHLNKPDGSMYLSESDLIQVTSWYSKYRAEVGEQGENIDCFLSEKDRKRLISALRQHCAQRITSNVSS-ILSEGDQDTEHAPKHRSLFRQKKMKISKSILSRDDLSEVIMNSVGEQVKRILDLKMRDLDQAIAQVVAEILLDFQTXXXXXXXXXXXXXXXEERGIYLCATANHMAKCLEFSEELRDSFIPLGLDHHRPEIEERMESVIEGFRSTASMALHVLIDGIKPTLEAHATRLFAPSTGTEVILDILAVLDDFFSYYEKALLDYHFEYLAIETLKRVVVWYLVPFLRLTHPRLDESGARRFTSLPSFDDQSED---FTGNMLRTVITRRVESTATA-LTSAAGLASMTGGAVLAHLEKDIENIAAFMAGKVPLHQKKQLKPTLEPLYAIRALYACKTTVSAMAEALREAKVAVDRALRPLWTMEYGAQGQFSLRMAEKIWEARQDISSSSVAEAVNITRISLDRIEPPPTPSRMSSVDDGRVWSSRYSDANGSFSERFMERSGNYNEQNLSSSSLIWTPRS 884          
BLAST of Gvermi7022.t1 vs. uniprot
Match: R7QCM7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCM7_CHOCR)

HSP 1 Score: 731 bits (1886), Expect = 1.420e-249
Identity = 407/898 (45.32%), Postives = 571/898 (63.59%), Query Frame = 0
Query:    1 MSQIQQEAITLVSDAISGADGNLLPAIDTASEKWQIELRDAQSTARKLLAQVLEERETLRKSLASAADLWYILQPDFPADDPNDEAQQPPDFCEGSFPATPAQLSAVRALHNISQTLFWAEFTMEAPSALELATTHLENIHGNGLDKVVKGNPALLVDAHAHLTAAERLRDLILLEIPTPSENPNPVKWFSKAAETRHLLEDIVLRGIFRNVVQLSQVNPCILVAGARVVESEEAEDEWWTDHIHKNALEERGAVVRAFGTHDYKKRALNAIVESLQAQFWQRERELRT--FKNQMANSDNDISPN-LDREFHVSSILEWIEQRRSETEIVRRYVTPCLPPSFQVSQLYESELHRQFMRLLSQLLHLNNADGSMLLSEVDLIKLTSWYSKYRSEVDEQSESIDCFLGEKDRRRLIVALQQHCARSVIASITSQICPQEHVDVGVEAKQHSAAKRKRLRVSKAVLCRGDLSQVIMDCVGEQVRQMLDLKMRDLDQAIAQVVSDILIDFQTEVRQVIANDKIDCTAEDGGSYLCATANHMAKCLGFSEELRDSFIPLGLDHHRPEIEERMESVIDGFRSTAAEAIHFLIDGMKPSLEMHVTRLFAPSTGTEVVLDMLAVLADYFKDYKKALLDYHFEYLAIETLKRVVVWYLVPFLRLTHPRLDESVARRYTSLPTFEDQTEDVEEISQNVSRRLSTRRSDASSRGVLSSTAGLASMSGGAVLALVEKDISNISAFMDKQVPLHQRKQLKPALEPLWAIQALYSCDSTAPAMAEAFRDAKLMIDRALRPLWAMEYGAHGQFGLRNAEKIWETRHDLSPSVIVEAINMCRINIDRIDTHTP--SRMSSVDDGRIWSSRYSDPNGSFSEXXXXXXXXXXXQNLSSSSLVWTPRSCSSSIAKR 893
            M Q+Q+E I  VS A++ ADG+LL  I+   E+W+ EL  A++TAR LL  VL ERE+LR +LA+A+++W  L+P    +     +    +   G    T  Q+  V++L N++ T+++ EF M AP A++     +  +  +G+DKVV GN A+LV+AHA LTA ERLRDLILLE P      +P+ WF+ A +TR  LED V+R IF NV+ +SQ NP +LVA  R++ESEEAED WW  H+ +  L E G  VR FG  +Y+ RAL +++ S++  F++++REL     + +M    +   P+   R   VS +L WIE+RRSE E VRR+V PCLPPSF +S  YE ELHRQFMRL++QLLHL + DGSM+LSE DLI LTSWY KYR+EV E  E+ID FL + DRRRLI ALQ+HCA  +   +   +    +     +      A R       A      L  +++  + EQVR+ML LK++ +DQAIA++ +D LI FQ EVR  ++++ ++ T E+     CATAN+MA+CL +SE++RD F+PL  +  R  IEERME VI+GFRS A+ A+  LIDGM  SL  HV RL+AP TGTE++LD++A + DYF +Y+  LL YHFE+LAIE+LKRV+VWYL PFL L      ES ARR+TSLPTF +       I +    R S  R+ A+     +  +GL S+SG AV+A ++KD +N+S FM ++V ++Q+KQL P LEP+ AI++LY+C ST   M++AFR+A+++I RA+RP W    G  GQ   R AE IWE R D++P V++EA+++ R   D+ D  +P  SRMSS D+G    SR+ D  G FSE           +   S SL+W P +  S  ++R
Sbjct:    1 MGQVQEETIRAVSAALADADGDLLSVINAKQEQWEAELAAAKNTARSLLGNVLNERESLRTALATASEIWGTLKPRNVLERHGKGSPARTEIATGVLADT-KQIENVQSLQNVAHTIYYLEFIMGAPGAVQRTRKFIAKLVDDGVDKVVPGNAAMLVEAHAILTAVERLRDLILLETPAIDVTDSPLSWFADATQTRGTLEDFVIRDIFSNVIVVSQSNPRLLVAAGRIIESEEAEDVWWNKHLERCGLTEEGGAVRPFGAQNYRNRALESVMTSIRDIFYKKKRELGLDDLEKEMNRDRSRSQPSPRGRLVDVSGVLNWIEERRSENETVRRFVVPCLPPSFCISSSYEKELHRQFMRLITQLLHLVHPDGSMMLSESDLIALTSWYCKYRTEVGEHEETIDSFLSDDDRRRLIFALQKHCAGRISTKMKFAMAANRNASREGDIDN---ALRNGSDGDTAGKSNSTLPDIVLSSINEQVRRMLALKIKGMDQAIAEISADCLIAFQREVRSAMSDEALESTEEEYRLSACATANNMARCLEYSEDIRDLFVPLATERGRRNIEERMERVIEGFRSCASSALLVLIDGMDSSLRSHVARLYAPQTGTEIMLDIIATMEDYFSEYQGFLLPYHFEHLAIESLKRVIVWYLAPFL-LAVQNTSESAARRFTSLPTFGEMNTMTPVIPKETGDRGSAGRAPATRGSDTTIVSGLRSLSGAAVVAQIDKDRTNLSEFMSRKVVMYQKKQLPPTLEPMQAIRSLYTCPSTTFGMSDAFREARIVISRAMRPQWVSRCGLSGQMTFRVAEVIWERREDVNPVVLLEAVSLIRSLGDKPDRLSPRESRMSSFDEGHFLRSRHRDLRGPFSERLLGNGLNF--ERTPSPSLLWAPSTSRSWRSRR 891          
The following BLAST results are available for this feature:
BLAST of Gvermi7022.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5G8_9FLOR0.000e+067.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCM7_CHOCR1.420e-24945.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableGENE3D1.10.357.50coord: 463..596
e-value: 8.8E-7
score: 30.6
IPR010326Exocyst complex component EXOC3/Sec6PFAMPF06046Sec6coord: 204..652
e-value: 5.4E-30
score: 104.3
IPR010326Exocyst complex component EXOC3/Sec6PANTHERPTHR21292EXOCYST COMPLEX COMPONENT SEC6-RELATEDcoord: 40..688

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:972576..975284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7022.t1Gvermi7022.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 972576..975284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7022.t1 ID=Gvermi7022.t1|Name=Gvermi7022.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=903bp
MSQIQQEAITLVSDAISGADGNLLPAIDTASEKWQIELRDAQSTARKLLA
QVLEERETLRKSLASAADLWYILQPDFPADDPNDEAQQPPDFCEGSFPAT
PAQLSAVRALHNISQTLFWAEFTMEAPSALELATTHLENIHGNGLDKVVK
GNPALLVDAHAHLTAAERLRDLILLEIPTPSENPNPVKWFSKAAETRHLL
EDIVLRGIFRNVVQLSQVNPCILVAGARVVESEEAEDEWWTDHIHKNALE
ERGAVVRAFGTHDYKKRALNAIVESLQAQFWQRERELRTFKNQMANSDND
ISPNLDREFHVSSILEWIEQRRSETEIVRRYVTPCLPPSFQVSQLYESEL
HRQFMRLLSQLLHLNNADGSMLLSEVDLIKLTSWYSKYRSEVDEQSESID
CFLGEKDRRRLIVALQQHCARSVIASITSQICPQEHVDVGVEAKQHSAAK
RKRLRVSKAVLCRGDLSQVIMDCVGEQVRQMLDLKMRDLDQAIAQVVSDI
LIDFQTEVRQVIANDKIDCTAEDGGSYLCATANHMAKCLGFSEELRDSFI
PLGLDHHRPEIEERMESVIDGFRSTAAEAIHFLIDGMKPSLEMHVTRLFA
PSTGTEVVLDMLAVLADYFKDYKKALLDYHFEYLAIETLKRVVVWYLVPF
LRLTHPRLDESVARRYTSLPTFEDQTEDVEEISQNVSRRLSTRRSDASSR
GVLSSTAGLASMSGGAVLALVEKDISNISAFMDKQVPLHQRKQLKPALEP
LWAIQALYSCDSTAPAMAEAFRDAKLMIDRALRPLWAMEYGAHGQFGLRN
AEKIWETRHDLSPSVIVEAINMCRINIDRIDTHTPSRMSSVDDGRIWSSR
YSDPNGSFSERYMERSGGYNEQNLSSSSLVWTPRSCSSSIAKRVSLENRP
RR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010326EXOC3/Sec6