Gvermi7007.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7007.t1
Unique NameGvermi7007.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length154
Homology
BLAST of Gvermi7007.t1 vs. uniprot
Match: A0A2V3J4F2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F2_9FLOR)

HSP 1 Score: 163 bits (413), Expect = 1.640e-48
Identity = 75/152 (49.34%), Postives = 108/152 (71.05%), Query Frame = 0
Query:    2 HYDKRVALAVAGVTAAGIGFGTAYYLYRKQTDPSSLVTLPIRLEKYHQDYLEQMAEMYTQSDHDKAFQAIVMHCMNAALNDSV-EDLIFKTIRCNSCGQKEKVAFEATVSRAQAQFITAMIAKHDIGGGDEKVVRILFEYCINDVDDANIFA 152
            + ++++ LA+AG  AAG+GF TAYYLYRK T  S + ++PIR+E YHQ YL+  A  YTQ D  +A + I+ +C+N + + S  E  IF  +RCNSCG+KEK+A+EA ++ AQ  F+  ++A ++I  G EK VRI+ EYCIN+V+DA IFA
Sbjct:   35 YNNRKITLAIAGAAAAGVGFATAYYLYRK-TQASQITSVPIRIETYHQSYLQASAATYTQGDQQEALRRIIAYCINISSSSSESEQTIFTNVRCNSCGKKEKIAYEALITNAQLDFVNRVMATYNIDAGQEKAVRIMLEYCINEVEDAVIFA 185          
BLAST of Gvermi7007.t1 vs. uniprot
Match: R7QEQ9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEQ9_CHOCR)

HSP 1 Score: 107 bits (268), Expect = 5.870e-27
Identity = 54/151 (35.76%), Postives = 88/151 (58.28%), Query Frame = 0
Query:    4 DKRVALAVAGVTAAGIGFGTAYYLYRKQTDPSS-LVTLPIRLEKYHQDYLEQMAEMYTQSDHDKAFQAIVMHCMNAALNDSVEDLIFKTIRCNSCGQKEKVAFEATVSRAQAQFITAMIAKHDIGGGDEKVVRILFEYCINDVDDANIFAQ 153
            DKRV +A+ G TA+  G G AYYLY +    S   + + + LE    ++L  +++ YT  D   A + +V HC  A+ +    + IFK +RCNSCG+KEK+ F  ++ + Q  F+     K++I  G++K +R++ EY IND  +++IF  
Sbjct:    6 DKRVTIALIG-TASVCGAGLAYYLYNRHFHSSEESIEIELNLESAQLEWLGTVSDKYTDGDVAIAMKKVVDHCQVASEDPKAAETIFKKVRCNSCGKKEKLPFTVSLLQKQVDFLGDAAKKYEITAGNDKCMRVMLEYAINDAQESSIFGD 155          
The following BLAST results are available for this feature:
BLAST of Gvermi7007.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4F2_9FLOR1.640e-4849.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEQ9_CHOCR5.870e-2735.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..153
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:914287..914748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7007.t1Gvermi7007.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 914287..914748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7007.t1 ID=Gvermi7007.t1|Name=Gvermi7007.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=154bp
MHYDKRVALAVAGVTAAGIGFGTAYYLYRKQTDPSSLVTLPIRLEKYHQD
YLEQMAEMYTQSDHDKAFQAIVMHCMNAALNDSVEDLIFKTIRCNSCGQK
EKVAFEATVSRAQAQFITAMIAKHDIGGGDEKVVRILFEYCINDVDDANI
FAQ*
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