Gvermi7003.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi7003.t1
Unique Name	Gvermi7003.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	586

Homology

[Close]

BLAST of Gvermi7003.t1 vs. uniprot
Match: A0A2V3J4U4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4U4_9FLOR)

HSP 1 Score: 439 bits (1129), Expect = 5.910e-140
Identity = 287/600 (47.83%), Postives = 377/600 (62.83%), Query Frame = 0

Query:    2 TTLARQDSLDVSPSVVTVRACVETSTGTEDQVTFLFLHAFRRATLSETDLMVSRGFTRPFRYNETYTCTVGVAIDVPSDTTGPVHLVLSKRVSVESAVVKVSAVRSSNTVAESPLNWNINLLSMHEKLNKSFDTIEQPFVFVISSWPYLKHVELDGIQVDNSGFRFIYGSESRFPNPVCDDSGTQLVTSIVGRRLGVGPNQTRIVPIPVRDCEKPYTLDFILSALRHVNTNVE--------TSSSSNSFLLFDDQLEESGLLNDSTLQKEFQVLANAGVITLIPGKTCIASQPSYVAVGAFGRAAHNRTYS-STDNEYVIRSSMCSDMFDVFGPGDFSTTASLAGQESYENIDRGSNVAAGGVLSVFLLLSLNWSRKINVTEAKSLLRGLTKTTPLVGDAATGELSGYGRALPLLGSGTSLSDLRKSFADLSSSSSTNN--FMSFVSSLPTAAVVGICLAIGLVLMVVXXGCXXXXXXXXXXXXXXXXXGESASRDDIENVAEQH--THMPRDRSRGALLRPPTILDIQSPVPIKTQSDRREKDKSRPVQPQPIRVPVVQRLLSLNRAKESPITRGDKASWFATPKSEKPDSP---TFNR 585
            T +A ++SL+VS S+VT+ AC+      E   + L L+AFRR T    DL+ SRG       +E   C   V +D+P      ++LVLS+     +  V++S  RS+N  A SP+ WN +LLS+ EK N + +  E+  +FVISSWP L+HVEL G  +D SG + IYGS SR P  +CDD GTQLVTS+VG R+G+GP  T IVPIPVRDCE+ Y+   ILSALR V T V+        +SS  N+F+LFD+ L+E+GL+ND  L KE ++L+N GV+ ++PGKTC   +PSYVAV AFGR   + T      ++YVI SS C D+FDVFGPGD+ST+   AG ESY  I +G NVAAGG++SVFL LS + +  +N+T+ K +L  + + +PL+G+ +  E  G  R LPLLG+G+SLSDLRKSF   SS SS  +  F   +S L TA +VGI L IG      XX  XXXXXXXXXXXXXXXXX  S    DIE  +  H  T   +D +R          ++ SP+P++ +                IR+PVVQRLLS+NR+KESPITRGDKASWFATPK+  PD     TF R
Sbjct:  374 TEVAGRNSLNVSSSIVTINACIMQR---EQDPSLLSLYAFRRQTFLGDDLIASRGAMGSAMDDEDQDCFRSVRLDIPDSYPDVIYLVLSRNKRFGAVNVRLSTSRSTNAEAVSPMLWNRDLLSLPEKDNNTLNLAEKSKIFVISSWPNLEHVELLGATIDTSGLQQIYGSPSRLPRSICDDLGTQLVTSVVGSRIGIGPRSTVIVPIPVRDCERSYSRSVILSALRFVRTTVDVSARAKDDSSSHPNTFVLFDEYLQETGLVNDVVLLKELELLSNLGVVNVVPGKTCNVKRPSYVAVRAFGRRVSDNTQRVELSDKYVIDSSQCLDLFDVFGPGDYSTSVYTAGPESYRTIMQGCNVAAGGIVSVFLFLSSSLNVPLNITKVKDILDEMGEVSPLIGNISLNEFQGIARELPLLGAGSSLSDLRKSFTKRSSESSKESIGFFRTISKLSTAVIVGISLTIGXXXX--XXXXXXXXXXXXXXXXXXXXXXXSVYEVDIETASLTHDSTTAKQDTNRNKKDSAARESEVASPIPLRKRXXXXXXXXXXXXXXX-IRMPVVQRLLSMNRSKESPITRGDKASWFATPKA--PDGAGNRTFKR 965

The following BLAST results are available for this feature:

BLAST of Gvermi7003.t1 vs. uniprot

BLAST of Gvermi7003.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J4U4_9FLOR	5.910e-140	47.83	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036852	Peptidase S8/S53 domain superfamily	GENE3D	3.40.50.200	Peptidase S8/S53 domain	coord: 117..390 e-value: 2.1E-5 score: 25.7
IPR036852	Peptidase S8/S53 domain superfamily	SUPERFAMILY	52743	Subtilisin-like	coord: 137..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..585
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 485..504
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..441
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 468..585
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 442..467
None	No IPR available	TMHMM	TMhelix		coord: 442..464

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24229	contig	ScGOVlb_24229:891744..893501 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi7003.t1	Gvermi7003.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24229 891744..893501 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi7003.t1 ID=Gvermi7003.t1|Name=Gvermi7003.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=586bp
MTTLARQDSLDVSPSVVTVRACVETSTGTEDQVTFLFLHAFRRATLSETD
LMVSRGFTRPFRYNETYTCTVGVAIDVPSDTTGPVHLVLSKRVSVESAVV
KVSAVRSSNTVAESPLNWNINLLSMHEKLNKSFDTIEQPFVFVISSWPYL
KHVELDGIQVDNSGFRFIYGSESRFPNPVCDDSGTQLVTSIVGRRLGVGP
NQTRIVPIPVRDCEKPYTLDFILSALRHVNTNVETSSSSNSFLLFDDQLE
ESGLLNDSTLQKEFQVLANAGVITLIPGKTCIASQPSYVAVGAFGRAAHN
RTYSSTDNEYVIRSSMCSDMFDVFGPGDFSTTASLAGQESYENIDRGSNV
AAGGVLSVFLLLSLNWSRKINVTEAKSLLRGLTKTTPLVGDAATGELSGY
GRALPLLGSGTSLSDLRKSFADLSSSSSTNNFMSFVSSLPTAAVVGICLA
IGLVLMVVVVGCIIIACRRRGRADEEEEEGESASRDDIENVAEQHTHMPR
DRSRGALLRPPTILDIQSPVPIKTQSDRREKDKSRPVQPQPIRVPVVQRL
LSLNRAKESPITRGDKASWFATPKSEKPDSPTFNR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036852	Peptidase_S8/S53_dom_sf