Gvermi7001.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7001.t1
Unique NameGvermi7001.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length257
Homology
BLAST of Gvermi7001.t1 vs. uniprot
Match: A0A2V3J7Z8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7Z8_9FLOR)

HSP 1 Score: 343 bits (881), Expect = 3.170e-116
Identity = 175/258 (67.83%), Postives = 201/258 (77.91%), Query Frame = 0
Query:    1 MGYGQYSYITDKTKGHVVQYYVDKFRVASDFAKRGPANLADAKLGRDEKGRVLVPKKGIPQEFDEALPPFDETAPPDPRIAEAEGELYPWDPKYVDPSFSPDTYANMSDEEIAEDAFQKFRSSMYEERTSALTSMDFGAVARKQRIKNGLDEKYLLCLDGSLDATYARLQNIADPMMFTPYGEPQTEIPGFPYLPSVGAMDFQEPQGLQINFWTG--ERDVVAP-YKRPSGPATPTLPYNTSPTVDEMKKAQQARGII 255
            MGYG YSY+TDKTKGHV QYYVDKFR+ASDF+K  PA+L+DAKLGRD+KGRV+VP+KGIPQ FD  +P  D TAPPDPRIAEAEG ++ WDP YVDP FSP TY N  D  +AEDAFQKFR+S+ E+R + LT MDFGAV RK+RI+ GLDEKYLLCLDGSLD  YA LQ+IADP  FTP GEPQTEIPG PY  SVGAMDF    G +I FW     + V  P +K+PSG  TP LPYN S TVD++K AQ+AR II
Sbjct:   41 MGYGDYSYLTDKTKGHVNQYYVDKFRIASDFSKGVPASLSDAKLGRDQKGRVIVPEKGIPQAFDSPIPERDATAPPDPRIAEAEGAVFAWDPAYVDPKFSPGTYENCEDPAVAEDAFQKFRASVNEQRGAVLTRMDFGAVERKKRIRAGLDEKYLLCLDGSLDVRYAVLQDIADPPTFTPTGEPQTEIPGQPYTGSVGAMDFMLTPGEEIAFWKQLQAKGVDEPVFKKPSGSDTPELPYNVSATVDQLKDAQKARDII 298          
BLAST of Gvermi7001.t1 vs. uniprot
Match: A0A291FEB5_GRIPA (LRC5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB5_GRIPA)

HSP 1 Score: 303 bits (775), Expect = 4.990e-100
Identity = 154/253 (60.87%), Postives = 181/253 (71.54%), Query Frame = 0
Query:    1 MGYGQYSYITDKTKGHVVQYYVDKFRVASDFAKRGPANLADAKLGRDEKGRVLVPKKGIPQEFDEALPPFDETAPPDPRIAEAEGELYPWDPKYVDPSFSPDTYANMSDEEIAEDAFQKFRSSMYEERTSALTSMDFGAVARKQRIKNGLDEKYLLCLDGSLDATYARLQNIADPMMFTPYGEPQTEIPGFPYLPSVGAMDFQEPQGLQINFW-TGERDVVAPYKRPSGPATPTLPYNTSPTVDEMKKAQQAR 252
            MGYG YSYITDKTKGHV QYYVDKFR+ASD+ K  P   ADA LGR  KG VLVP +GIPQEFD A+ P D T  PDPRIAE+EGE+YPWD  Y DP F P  Y++++D E  + +F  FRSSM+E R  +LT+ DFGAVAR QRIKNGLDEKYL+ LDG LDA YAR Q IA+P + +P G P TEIPG PYL SVGAMDF   +   + FW +G       YKRPSG  TP LPYNT+  V  + +AQ+A+
Sbjct:   43 MGYGAYSYITDKTKGHVNQYYVDKFRIASDWTKGTPKTQADAVLGRTFKGAVLVPTEGIPQEFDPAIAPRDNTVDPDPRIAESEGEVYPWDINYFDPQFLPSAYSDVNDPETVDSSFADFRSSMWESRRESLTAQDFGAVARVQRIKNGLDEKYLMTLDGMLDARYARFQKIAEPAVLSPTGTPMTEIPGTPYLGSVGAMDFIAQEEESVAFWKSGPSTTPVNYKRPSGAQTPNLPYNTAAPVAAINEAQEAQ 295          
BLAST of Gvermi7001.t1 vs. uniprot
Match: R7Q7D7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7D7_CHOCR)

HSP 1 Score: 299 bits (765), Expect = 1.220e-98
Identity = 150/256 (58.59%), Postives = 181/256 (70.70%), Query Frame = 0
Query:    1 MGYGQYSYITDKTKGHVVQYYVDKFRVASDFAKRGPANLADAKLGRDEKGRVLVPKKGIPQEFDEALPPFDETAPPDPRIAEAEGELYPWDPKYVDPSFSPDTYANMSDEEIAEDAFQKFRSSMYEERTSALTSMDFGAVARKQRIKNGLDEKYLLCLDGSLDATYARLQNIADPMMFTPYGEPQTEIPGFPYLPSVGAMDFQEPQGLQINFWTGERDVVAPYKRPSGPATPTLPYNTSPTVDEMKKAQQARGIIP 256
            MGYG YSY TDKT+GH +QYY+DKFR+ SDF +  P   +   LGR   G V VPK+GI Q FD ALP  DE   PDPR+ EA G LYPWD  YVDP +  DT+ANMSD+EIA+ +FQ+FR+S+ E R  ALT+MDFGA AR +RI  G+DEK LL LDG+LD  YARLQ I++P    P G PQTEIPG PYL SVGAMDF E  G ++ FW  ++    PYKRPSG  TP LPYN SP V E+++ Q ARG++P
Sbjct:   41 MGYGDYSYSTDKTRGHAMQYYIDKFRIVSDFGRGVPLYASTPMLGRGIMGGVEVPKEGIKQVFDPALPTSDEPTAPDPRLVEASG-LYPWDSDYVDPEWRADTFANMSDDEIADQSFQEFRASVSESRGMALTAMDFGATARVERIIGGIDEKELLTLDGALDVNYARLQKISNPATLNPTGSPQTEIPGIPYLTSVGAMDFIEKPGEKVAFWKTDKPADLPYKRPSGADTPELPYNASPDVAEIQEGQAARGLLP 295          
BLAST of Gvermi7001.t1 vs. uniprot
Match: A0A1X6NU69_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU69_PORUM)

HSP 1 Score: 217 bits (552), Expect = 2.960e-66
Identity = 127/268 (47.39%), Postives = 154/268 (57.46%), Query Frame = 0
Query:    1 MGYGQYSYITDKTKGHVVQYYVDKFRVASDFAKRGPANLADAKLGRDEKGRVLVPKKGIPQEFDEALPPFDETAPPDPRIAEAEGELYPWDPKYVDPSFSPDTYANMSDEEIAEDAFQKFRSSMYEERTSALTSMDFGAVARKQRIKNGLDEKYLLCLDGSLDATYARLQNIADPMMFTPYGEPQTEIPGFPYLPSVGAMDFQEPQGLQIN-------------FWTGERDVVAPYKRPSGPATPTLPYNTSPTVDEMKKAQQARGII 255
            MGYG YSY+TD TKGHV QYYVDKFR ASDF++  PA+ AD  LGR  KG V VP +GIPQ  +  L P  + A  DPR+AEAEG ++ WD  YVDPS S     + +DE +A+ AF  FR SM   R +AL        A   R+   + EK LL LDG LDA Y+RLQ I +    TPYG PQTEIPG PY+ SVGA+DF +  G +               FW         YKRP G ATP   YN SP V  +    ++ GI+
Sbjct:   43 MGYGDYSYLTDATKGHVGQYYVDKFRRASDFSRGVPASAADGLLGRTAKGAVAVPAEGIPQLTEGPLAPSPDAAA-DPRVAEAEGTVWSWDAGYVDPSLS--AVEDTNDEAVADRAFAAFRGSMESTRGAALARSSKALEATVTRLSGTIGEKALLTLDGQLDAEYSRLQKIKNHPRLTPYGRPQTEIPGRPYVGSVGALDFAKGPGGEPATTAVVAAGNGVGAFWKEPEQPQPTYKRPLGAATPERIYNASPDVARLTSTAESAGIV 307          
The following BLAST results are available for this feature:
BLAST of Gvermi7001.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J7Z8_9FLOR3.170e-11667.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A291FEB5_GRIPA4.990e-10060.87LRC5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
R7Q7D7_CHOCR1.220e-9858.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NU69_PORUM2.960e-6647.39Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:887105..887875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7001.t1Gvermi7001.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 887105..887875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7001.t1 ID=Gvermi7001.t1|Name=Gvermi7001.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=257bp
MGYGQYSYITDKTKGHVVQYYVDKFRVASDFAKRGPANLADAKLGRDEKG
RVLVPKKGIPQEFDEALPPFDETAPPDPRIAEAEGELYPWDPKYVDPSFS
PDTYANMSDEEIAEDAFQKFRSSMYEERTSALTSMDFGAVARKQRIKNGL
DEKYLLCLDGSLDATYARLQNIADPMMFTPYGEPQTEIPGFPYLPSVGAM
DFQEPQGLQINFWTGERDVVAPYKRPSGPATPTLPYNTSPTVDEMKKAQQ
ARGIIP*
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