Gvermi6998.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6998.t1
Unique NameGvermi6998.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length807
Homology
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A2V3J4H1_9FLOR (Myb-like protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4H1_9FLOR)

HSP 1 Score: 289 bits (739), Expect = 9.910e-82
Identity = 221/435 (50.80%), Postives = 258/435 (59.31%), Query Frame = 0
Query:    1 MADRKAEPNCTSAPDTSNPTPEKETEDKPQCQQTSGDSSQNATSQVRISVLKAIANHQKKRISELERTLEKKRATIQRLSATPPHHHPPLPMVPPAALPAMPTIPTSAPITPAPTSSPHMNASPASGAVTSSSQPASQTTPAVSQPQPSPSTSASNHVMPTPMLGFPP-QPXXXXXXXXXXXXXPAFAAQYMGVMP-PAVLHPLQASHAPISSQTNQHDKGNEGQEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRSDMRHGRLSNEDPTNSIAADAAAAVKAAAAAAMRGKVPGTCSVVFKDSDSTGTPAGPSSSSSGKQCHSSHHNSHGASSGDGSIGANRIGEQHTETSG----TDNHSAAVAAIAAEAKALGHGVLPLEAIEIPPMSFRNTQPKMVDKDT 429
            MADR+ + N  SA D S+  P  E +++P  Q    +    ATSQVR SVL+ IA HQ KRI+ELERTLEKKRATI+RLSA PP  HP +PMVPP        + T      A T+S  + A  AS              P  SQPQ  P+  A N  M  PM+GFPP QP         XXXX             PAVLHPLQ   +    Q  Q DK N+G E+KQSRYWTPDEH+RFLAG+KACGPKNYLQISEYVGTRNAKQVRTHAQK+QKR ERE+AK R+DMRHGR +   P  S+ A AA AV                    KDSDS GT AGPSS SSGKQCHSS+H S GASS +GS+  N   E++ E SG        +AAVAA+AAEA ALG G LP  A+++ P  F     K V +DT
Sbjct:    1 MADREGDQNDVSAQDCSSSIPNHEPKEEPCEQPPPAEPLPRATSQVRNSVLEEIAAHQAKRITELERTLEKKRATIKRLSAAPPLPHPAIPMVPPTXXXXX-XVSTGTQNGSAQTAS--VGAPQASXXXXXXXXXXXSGLPPHSQPQSLPTGGAHNPAMAAPMVGFPPPQPHLAAGYPYMXXXXXXXXXXXXXXXXXPAVLHPLQPPQSRTPRQGAQKDKTNDGSERKQSRYWTPDEHQRFLAGVKACGPKNYLQISEYVGTRNAKQVRTHAQKFQKRREREEAKLRNDMRHGR-TEVSPMASVGA-AAKAVXXXXXXXXXXXXXXXXPPQVKDSDSVGTQAGPSSCSSGKQCHSSNHQSQGASSAEGSVSTNTAAERNAENSGEGHPNSTSAAAVAAVAAEAVALGRGALPSGALQMAPKVFLGVGEK-VQEDT 429          
BLAST of Gvermi6998.t1 vs. uniprot
Match: R7QDX7_CHOCR (HTH myb-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDX7_CHOCR)

HSP 1 Score: 121 bits (304), Expect = 1.020e-24
Identity = 103/240 (42.92%), Postives = 130/240 (54.17%), Query Frame = 0
Query:  187 AAQYMGVMPPAVLH-PLQASHAPISSQTNQHDKGNEGQEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRSDMRHGRLSNEDPTNSIAADAAAAVKAAAAAAMRGKVPGTCSVVFKDSDSTGTPAGPSSSSSGKQCH-----------------SSHHNSHGASSGDGSIGANRIGEQHTET---SGTDNHSAAVAAIAAEAKALGHGVL 405
            AA  M VM       P Q      S QT+   +  EG E+KQSRYWT DEH+RFLA +  CGPKNY+QISE+VGTRN KQVRTHAQKYQ++LERE+AKRRS+ R    + E   +++               M G VPG  +   +  DS     GP+SSSSGK                    SS ++  G+ SG G   + R     +E+   +GT N  AAVAA+AAEA AL  G+L
Sbjct:   32 AASLMNVMSHGTASVPTQPPQPHNSLQTSPPIQRGEG-ERKQSRYWTADEHQRFLAAVSTCGPKNYIQISEFVGTRNPKQVRTHAQKYQQKLEREEAKRRSETRLA--TGERGGSTVGVAXXXXXXXXXXXXMNGNVPGAVAAGVQQ-DSMRGYGGPTSSSSGKNFSHSDNQDQLRGGISVDGTSSTNDLSGSGSGSGDCFSKRNTANESESPPDNGTSN--AAVAAVAAEAAALRGGIL 265          
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A7S1TD26_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD26_9RHOD)

HSP 1 Score: 90.5 bits (223), Expect = 2.650e-15
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 0
Query:  221 EGQEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRR 285
            E Q+QKQ+RYWTP+EHERFL G+K  G KNY+ IS+ V TR  KQVRTHAQK+QKRLERE +K+R
Sbjct:  241 ERQDQKQTRYWTPEEHERFLRGVKLYGDKNYIAISKIVVTRTPKQVRTHAQKFQKRLEREASKKR 305          
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A2V3J5I5_9FLOR (Myb-like protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5I5_9FLOR)

HSP 1 Score: 79.7 bits (195), Expect = 2.440e-12
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0
Query:  228 SRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRR 285
            +RYWT  EH++FL  +K  GPKNY+ IS++VGTR  KQVRTHAQKYQ +LERE  KRR
Sbjct:  146 TRYWTAKEHQQFLYAVKLFGPKNYVAISQFVGTRTPKQVRTHAQKYQMKLEREAKKRR 203          
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A7S1ESP6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESP6_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 3.120e-12
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query:  228 SRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKR 284
            +RYW+  EHERFL G++ CG KNY  ++  VGTRNA+QVRTHAQK++ RL RE A+R
Sbjct:   51 TRYWSRAEHERFLKGIETCGMKNYAAVAVIVGTRNAQQVRTHAQKFEMRLAREAARR 107          
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A5J4Z933_PORPP (Myb-like protein I n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z933_PORPP)

HSP 1 Score: 81.6 bits (200), Expect = 3.430e-12
Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0
Query:  209 ISSQTNQHDKGNEGQEQ--KQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKR 284
            +S +T Q      GQ    KQ+RYWT  EH+RFL      G K Y+ I+EYVG+R+AKQVRTHAQKY KRLERE A+R
Sbjct:  406 VSKETEQEQGAESGQADGAKQTRYWTQAEHDRFLQACAKFGEKAYVSIAEYVGSRSAKQVRTHAQKYAKRLEREHARR 483          
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A7S0BIZ1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIZ1_9RHOD)

HSP 1 Score: 74.7 bits (182), Expect = 5.880e-12
Identity = 37/56 (66.07%), Postives = 40/56 (71.43%), Query Frame = 0
Query:  229 RYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKR 284
            RYWT +EH +FL G K  GPKNY  IS  VGTR  KQVRTHAQKY+ RL RE A R
Sbjct:    6 RYWTEEEHRKFLEGRKLYGPKNYAAISAVVGTRTPKQVRTHAQKYEMRLVRESAMR 61          
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A151Z6W5_9MYCE (Myb domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6W5_9MYCE)

HSP 1 Score: 79.7 bits (195), Expect = 1.060e-11
Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 0
Query:  209 ISSQTNQHDKGNEGQEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRSDMRHGRLSNEDP 298
            + SQ N++++  + +++KQSRYWTP+EH RFL  +   G K+   I+ YV TRNA QVRTHAQKY  R++RE        R  +L N++P
Sbjct:  104 LQSQINKYEQEKQAEKKKQSRYWTPEEHSRFLEALNKFGHKDVKSIANYVATRNATQVRTHAQKYFLRIDRE--------RQRKLDNKEP 185          
BLAST of Gvermi6998.t1 vs. uniprot
Match: F0ZV37_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZV37_DICPU)

HSP 1 Score: 78.6 bits (192), Expect = 2.690e-11
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0
Query:  209 ISSQTNQHDKGNEGQEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRSDMRHGRLSN 295
            + SQ  ++++  + +++KQSRYWTP+EH RFL  +   G K+   IS+YVGTRN  QVRTHAQKY  R++RE  K+        L+N
Sbjct:   86 LQSQVAKYEQEKQTEKKKQSRYWTPEEHSRFLEALSKYGHKDVKSISQYVGTRNPTQVRTHAQKYFLRIDRERGKKLESKDGSSLAN 172          
BLAST of Gvermi6998.t1 vs. uniprot
Match: A0A7S1XF31_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF31_9RHOD)

HSP 1 Score: 71.2 bits (173), Expect = 4.350e-11
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 0
Query:  227 QSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLERE 280
            QSRYWTP+EH+RF+  ++  GPK+   IS +VGTRN  QVRTHAQKY  RL++E
Sbjct:   70 QSRYWTPEEHQRFIEAIQKFGPKDVRAISNFVGTRNPTQVRTHAQKYFLRLQKE 123          
The following BLAST results are available for this feature:
BLAST of Gvermi6998.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4H1_9FLOR9.910e-8250.80Myb-like protein I n=1 Tax=Gracilariopsis chorda T... [more]
R7QDX7_CHOCR1.020e-2442.92HTH myb-type domain-containing protein n=1 Tax=Cho... [more]
A0A7S1TD26_9RHOD2.650e-1569.23Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A2V3J5I5_9FLOR2.440e-1265.52Myb-like protein I n=1 Tax=Gracilariopsis chorda T... [more]
A0A7S1ESP6_9RHOD3.120e-1261.40Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4Z933_PORPP3.430e-1256.41Myb-like protein I n=1 Tax=Porphyridium purpureum ... [more]
A0A7S0BIZ1_9RHOD5.880e-1266.07Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A151Z6W5_9MYCE1.060e-1145.56Myb domain-containing protein n=1 Tax=Tieghemostel... [more]
F0ZV37_DICPU2.690e-1145.98Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A7S1XF31_9RHOD4.350e-1161.11Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..82
NoneNo IPR availableCOILSCoilCoilcoord: 263..283
NoneNo IPR availableGENE3D1.10.10.60coord: 231..277
e-value: 2.8E-11
score: 45.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 660..688
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..769
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..806
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 774..792
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..387
NoneNo IPR availablePANTHERPTHR12802:SF137MYB-LIKE PROTEIN Icoord: 217..321
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 217..321
IPR001005SANT/Myb domainSMARTSM00717santcoord: 227..276
e-value: 3.2E-9
score: 46.6
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 231..273
e-value: 1.70384E-8
score: 49.111
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 230..273
e-value: 2.4E-9
score: 37.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 231..278
score: 16.150427
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 225..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:878494..880914 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6998.t1Gvermi6998.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 878494..880914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6998.t1 ID=Gvermi6998.t1|Name=Gvermi6998.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=807bp
MADRKAEPNCTSAPDTSNPTPEKETEDKPQCQQTSGDSSQNATSQVRISV
LKAIANHQKKRISELERTLEKKRATIQRLSATPPHHHPPLPMVPPAALPA
MPTIPTSAPITPAPTSSPHMNASPASGAVTSSSQPASQTTPAVSQPQPSP
STSASNHVMPTPMLGFPPQPHVSPYPYMFPPPDPAFAAQYMGVMPPAVLH
PLQASHAPISSQTNQHDKGNEGQEQKQSRYWTPDEHERFLAGMKACGPKN
YLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRSDMRHGRLSNEDPTN
SIAADAAAAVKAAAAAAMRGKVPGTCSVVFKDSDSTGTPAGPSSSSSGKQ
CHSSHHNSHGASSGDGSIGANRIGEQHTETSGTDNHSAAVAAIAAEAKAL
GHGVLPLEAIEIPPMSFRNTQPKMVDKDTGRLEDDKSPKGSITGRTTEPM
APRNSSEPSNIIALKGCSVAAPSQSNKGCAETTETSHKEAEDASAIGNIL
QDCASKDEAAASLQGDHGGSCTGRAASTSEMLASSAAESKMKTDQGNAST
SGCLDGAKDRGREPLQSRSTRCTEAGNKQNEADRKSAGSVVHTKLTKTTV
GHEEVTNKKGSGTHDGMNAVKFEPESVDSCANLTAEKNVRGSSAGQNEET
AGDGIVKQECDMAVEADKKSQRQHRHDSESDRAKNGVNSDGTKPKSEDVG
ERSHSADEGCNDGEVRQERAIGDGRGTTGDADDAEKAGAAESRKRMREAD
EKEANKRARTDDEAEGEAAAGGSRNDTTVRQMRSNRGNITAGAKQNIARG
AAKRAR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf