Gvermi6978.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6978.t1
Unique NameGvermi6978.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length133
Homology
BLAST of Gvermi6978.t1 vs. uniprot
Match: A0A2V3J5M7_9FLOR (NFACT-R_1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5M7_9FLOR)

HSP 1 Score: 218 bits (556), Expect = 2.240e-71
Identity = 108/132 (81.82%), Postives = 118/132 (89.39%), Query Frame = 0
Query:    1 MKSLNTSEDNLLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSADPSGKAGSVTLKKEPTRTKVVFDERCIAFFLGQLKKK 132
            MKSLN+S D LLI VG+ AAEND LWRGAKQNDLWFH DGMSSPH+VLSVP KKK +AQLS+AIHEC QLVKY+SKAR+MAQVTVMYIEAKWVSADPSGKAGSV LKK+P RTKVVFDERC+ F L QLK+K
Sbjct:    1 MKSLNSS-DGLLIRVGETAAENDTLWRGAKQNDLWFHADGMSSPHVVLSVPGKKKKEAQLSDAIHECTQLVKYYSKARDMAQVTVMYIEAKWVSADPSGKAGSVILKKDPRRTKVVFDERCMEFMLAQLKRK 131          
BLAST of Gvermi6978.t1 vs. uniprot
Match: S0F396_CHOCR (NFACT-R_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F396_CHOCR)

HSP 1 Score: 122 bits (306), Expect = 2.650e-33
Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 0
Query:    6 TSEDNLLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQ-LSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSADP-SGKAGSVTLKKEPTRTKVVFDERCIAFFLGQLKKK 132
            TS D L I VG+NAAEN  L + AKQNDLWFHL+G SSPH +LSV   K+ K   L  ++HEC QLVK+FS ARE    +V++IEAKWVS +    K G+VTLKK P RT VV D   I       K++
Sbjct:    5 TSCDGLSIRVGENAAENQRLCKQAKQNDLWFHLEGQSSPHAILSVGGGKQGKNNALRSSLHECQQLVKHFSSAREARCASVIWIEAKWVSKNGVEDKVGAVTLKKTPKRTSVVADAGTIESLTAAKKRE 133          
BLAST of Gvermi6978.t1 vs. uniprot
Match: A0A7J7IC17_9RHOD (NFACT-R_1 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IC17_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 1.240e-20
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    9 DNLLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSADP---SGKAGSVTLKKEPTR 112
            D L   +G+NAAEN  L R A+QND WFHL+ + SPH +L  P +  T+    EA+  CAQLVK  SK R + ++TV+Y+ AK+VS        K GSVTL KEP R
Sbjct:    9 DGLRARLGENAAENQMLCRQARQNDWWFHLESLPSPHCLLENPGEAWTEPP-REAVLACAQLVKERSKWRHVHRITVIYLPAKYVSRRHLAIDDKPGSVTLLKEPKR 114          
BLAST of Gvermi6978.t1 vs. uniprot
Match: M1V6G6_CYAM1 (NFACT-R_1 domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V6G6_CYAM1)

HSP 1 Score: 88.2 bits (217), Expect = 4.990e-20
Identity = 52/105 (49.52%), Postives = 64/105 (60.95%), Query Frame = 0
Query:   11 LLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSA---DPSGKAGSVTLKKEPTR 112
            L   VG+NA EN AL R A+QND WFHL+ + SPH VL  P     +    EA+  CAQLVK  SK R++ +VTV+Y+ AK+VS        K GSV L KEP R
Sbjct:   11 LRARVGENALENQALCRSARQNDWWFHLESLPSPHCVLENPNGAWREPP-REAVLACAQLVKERSKWRQVHRVTVIYLPAKYVSRRHLQSDEKPGSVVLLKEPRR 114          
BLAST of Gvermi6978.t1 vs. uniprot
Match: A0A6A5C0H0_NAEFO (NFACT-R_1 domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C0H0_NAEFO)

HSP 1 Score: 80.9 bits (198), Expect = 4.980e-17
Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    6 TSEDNLLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWV 93
            +S+   LI VG+NA END + R A QNDLWFHL  +SSPH++LS   +  T +  SE+IH+ A L K FSK + M    V+Y   K V
Sbjct:    7 SSDQLYLITVGENAKENDTIRRQAAQNDLWFHLQDVSSPHVILSPVDRSLTTSFSSESIHQAASLCKAFSKQKSMQTSNVIYTPRKQV 94          
BLAST of Gvermi6978.t1 vs. uniprot
Match: UPI001D03791E (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D03791E)

HSP 1 Score: 79.0 bits (193), Expect = 2.810e-16
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    7 SEDNL-LIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWV 93
            S DNL LI VG+NA END + R A Q+DLWFHL  ++SPH++LS   +  T +  SE+IH+ A L K FSK + +    V+Y+  K V
Sbjct:    7 SSDNLYLITVGENAKENDTIRRQAAQSDLWFHLQDVASPHVILSPLDRTTTSSFSSESIHQAALLCKAFSKQKSLQTSNVIYLPRKHV 94          
BLAST of Gvermi6978.t1 vs. uniprot
Match: A0A7R9WI93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI93_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 9.350e-16
Identity = 52/124 (41.94%), Postives = 67/124 (54.03%), Query Frame = 0
Query:    7 SEDNLLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVP-----KKKKTKAQLSEA-IHECAQLVKYFSKA--REMAQVTVMYIEAKWVS---------ADPSGKAGSVTLKKEPTRT 113
            +ED   I VG++A END L R A Q DLWFHLDG  SPH++L +      +K  T A  S A I +  QL K +S+   R      ++Y+EAK V          ADPSG+   V L + PTRT
Sbjct:   30 AEDGTPILVGESAIENDQLCRRASQRDLWFHLDGRPSPHVILQLSATVGKRKSSTAASTSAAAIRDACQLCKAYSRGPIRRAPTCAIIYVEAKHVGKVKGKGGVVADPSGR---VHLSRAPTRT 150          
BLAST of Gvermi6978.t1 vs. uniprot
Match: D2VTE8_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VTE8_NAEGR)

HSP 1 Score: 67.0 bits (162), Expect = 1.250e-11
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0
Query:    6 TSEDNLLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQL-SEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSADPSGKAGSVTLKKEPTRTKVVFDE 119
            TS++  LI VG+NA END + + A QNDLWFHL+ +SSPH++L       + +   ++AI+    L K +SK +     +V+Y   K V        G V +K    + KV  D+
Sbjct:    7 TSDNQYLIIVGENAKENDKIRQEASQNDLWFHLEDVSSPHVILKPNNSSSSSSSFPAQAIYYAGVLCKAYSKQKATQTSSVIYAPRKSVKTVKEID-GRVEVKGHVEKMKVYRDD 120          
BLAST of Gvermi6978.t1 vs. uniprot
Match: A0A3G4ZQ83_9VIRU (NFACT-R_1 domain-containing protein n=1 Tax=Barrevirus sp. TaxID=2487763 RepID=A0A3G4ZQ83_9VIRU)

HSP 1 Score: 61.2 bits (147), Expect = 1.360e-9
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0
Query:   13 IHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSADPSGKAGSVTLK 107
            I +G NA END L + +K+ D+WFH+ G+ S HL++ V  +     Q+   I+ CA LVK  +K + + ++ V Y   K VS   +   G V LK
Sbjct:   13 IRIGQNAIENDNLIKESKETDIWFHISGLPSCHLIIDVSTEYPLTKQM---IYYCANLVKENTKYKNLPKIKVNYCPIKNVSR--TKVPGKVVLK 102          
BLAST of Gvermi6978.t1 vs. uniprot
Match: A0A5K0U8M7_9VIRU (NFACT-R_1 domain-containing protein n=1 Tax=Yasminevirus sp. GU-2018 TaxID=2420051 RepID=A0A5K0U8M7_9VIRU)

HSP 1 Score: 60.8 bits (146), Expect = 2.090e-9
Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 0
Query:   13 IHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSVPKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSADPSGKAGSVTLKKEPT 111
            I VG++A EN  L   + QND+WFH++G  S H+VLS+  +KK   +    I+ CA L K  SK ++     ++Y E K V    + K G+V  K+  T
Sbjct:   17 IRVGESAQENWDLIDASNQNDVWFHVEGHPSCHVVLSLEDRKKKPHK--SVINYCASLCKEGSKLKDSRNTVIIYTEIKNVKK--ADKPGAVYTKQTKT 111          
The following BLAST results are available for this feature:
BLAST of Gvermi6978.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5M7_9FLOR2.240e-7181.82NFACT-R_1 domain-containing protein n=1 Tax=Gracil... [more]
S0F396_CHOCR2.650e-3353.49NFACT-R_1 domain-containing protein n=1 Tax=Chondr... [more]
A0A7J7IC17_9RHOD1.240e-2048.60NFACT-R_1 domain-containing protein n=1 Tax=Cyanid... [more]
M1V6G6_CYAM14.990e-2049.52NFACT-R_1 domain-containing protein n=2 Tax=cellul... [more]
A0A6A5C0H0_NAEFO4.980e-1747.73NFACT-R_1 domain-containing protein n=1 Tax=Naegle... [more]
UPI001D03791E2.810e-1647.73uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A7R9WI93_9STRA9.350e-1641.94Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
D2VTE8_NAEGR1.250e-1135.65Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A3G4ZQ83_9VIRU1.360e-936.84NFACT-R_1 domain-containing protein n=1 Tax=Barrev... [more]
A0A5K0U8M7_9VIRU2.090e-937.37NFACT-R_1 domain-containing protein n=1 Tax=Yasmin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008532NFACT, RNA-binding domainPFAMPF05670NFACT-R_1coord: 7..107
e-value: 2.4E-17
score: 63.5
IPR039730Jlp2/Ccd25PANTHERPTHR13049DUF814-RELATEDcoord: 6..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:800483..800881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6978.t1Gvermi6978.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 800483..800881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6978.t1 ID=Gvermi6978.t1|Name=Gvermi6978.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=133bp
MKSLNTSEDNLLIHVGDNAAENDALWRGAKQNDLWFHLDGMSSPHLVLSV
PKKKKTKAQLSEAIHECAQLVKYFSKAREMAQVTVMYIEAKWVSADPSGK
AGSVTLKKEPTRTKVVFDERCIAFFLGQLKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008532NFACT_RNA-bd
IPR039730Jlp2/Ccd25