Gvermi6973.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6973.t1
Unique NameGvermi6973.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length211
Homology
BLAST of Gvermi6973.t1 vs. uniprot
Match: A0A2V3J5L8_9FLOR (Ras-related protein Rab-2A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L8_9FLOR)

HSP 1 Score: 394 bits (1012), Expect = 2.470e-138
Identity = 196/210 (93.33%), Postives = 203/210 (96.67%), Query Frame = 0
Query:    1 MTSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVGASNNAISLLDDAATESKPGCC 210
            M+SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDA AHSSSDMTIILVGNKADLEHRREV+ E GEAFA+EHGLLFLETSAKNNTNVE+AFLTTAA IYEKVKAGDLDLS+ERHGVKVGAS+NAISLLDDA TE+K  CC
Sbjct:    1 MSSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVSTESGEAFAREHGLLFLETSAKNNTNVEQAFLTTAAKIYEKVKAGDLDLSTERHGVKVGASSNAISLLDDATTETKSACC 210          
BLAST of Gvermi6973.t1 vs. uniprot
Match: A0A5J4Z8C3_PORPP (Ras-related protein Rab-2A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8C3_PORPP)

HSP 1 Score: 337 bits (863), Expect = 6.390e-114
Identity = 168/211 (79.62%), Postives = 187/211 (88.63%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVGASNNAISLLDDAATES---KPGCC 210
            SYAYLFKYIIIGDTGVGKSCLLLQFTD+RFTPIHDLTIGVEFGARIVT+ED QLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRK+TF H+ SWL+DA  HS S+MTIILVGNKADLEHRREV +E+GEAFAK+HGLLF+ETSAK+N NV+EAF+ TA  IYEKVK G LDL+SE+HGVK+G + N +SL D+ AT S   K  CC
Sbjct:   56 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFTPIHDLTIGVEFGARIVTIEDTQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFAHLESWLEDARQHSHSNMTIILVGNKADLEHRREVPRENGEAFAKQHGLLFIETSAKDNINVDEAFMQTAGMIYEKVKEGTLDLNSEQHGVKLGGTAN-VSLFDEKATASDASKSSCC 265          
BLAST of Gvermi6973.t1 vs. uniprot
Match: A0A7S0ZE95_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE95_9RHOD)

HSP 1 Score: 325 bits (834), Expect = 1.420e-111
Identity = 158/185 (85.41%), Postives = 173/185 (93.51%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVK 187
            SYAYLFKYIIIGDTG GKSCLLLQFTD+RFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETF H+LSWL+DA  HS S+MTIILVGNK+DL+HRREV +E GEAFAKEHGLLF+ETSAK+N NV++AF+ TA+ IYEKVK G LDL+SE+HGVK
Sbjct:    2 SYAYLFKYIIIGDTGAGKSCLLLQFTDKRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFAHLLSWLEDARQHSHSNMTIILVGNKSDLDHRREVPREQGEAFAKEHGLLFIETSAKDNINVDDAFMQTASAIYEKVKEGTLDLNSEQHGVK 186          
BLAST of Gvermi6973.t1 vs. uniprot
Match: A0A1Y1XI96_9FUNG (Ras-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XI96_9FUNG)

HSP 1 Score: 308 bits (790), Expect = 1.650e-104
Identity = 149/212 (70.28%), Postives = 180/212 (84.91%), Query Frame = 0
Query:    1 MTSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVGASNNAISLLDDAATESKPG--CC 210
            MTSYAYLFKYIIIGDTGVGKSCLLLQFTD+RF P HDLTIGVEFGAR +TV++K +KLQ+WDTAGQESFRSITRSYYRGAAGALLVYDITR+ETF+H+  WL+DA  HS+ ++TI+L+GNK+DLE +R V+KE+GEAFAKEHGL FLETSAK + NVEEAF+ TA  IYEK+++G L++ +E HG+KVG SN+  +  + AA  S  G  CC
Sbjct:    1 MTSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPAHDLTIGVEFGARFITVDNKSIKLQVWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFEHLAKWLEDAREHSNDNITILLIGNKSDLEGKRAVSKEEGEAFAKEHGLFFLETSAKTSANVEEAFINTAERIYEKIQSGVLNVKNESHGIKVGVSNSGGN--NPAANSSTGGGKCC 210          
BLAST of Gvermi6973.t1 vs. uniprot
Match: A0A830HTH3_9CHLO (Rab-2A protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HTH3_9CHLO)

HSP 1 Score: 306 bits (785), Expect = 1.020e-103
Identity = 145/211 (68.72%), Postives = 178/211 (84.36%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVGASNNAI---SLLDDAATESKPGCC 210
            SYAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR+VT++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+ETF H+ SWL+DA  H++++MTI+L+GNK+DL HRR+V+ E+GEAFAKEHGL+F+ETSAK   NVE+AF+ TA  I+EK+++G  D+S+E +G+KVG     +        AAT +K  CC
Sbjct:    2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFHHLASWLEDAKQHANANMTIMLIGNKSDLTHRRQVSTEEGEAFAKEHGLVFMETSAKTAHNVEDAFINTARKIHEKIESGIFDVSNESYGIKVGLGGGTVRPGEAQASAATPAKSNCC 212          
BLAST of Gvermi6973.t1 vs. uniprot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A n=64 Tax=Amniota TaxID=32524 RepID=RAB2A_HUMAN)

HSP 1 Score: 306 bits (783), Expect = 2.050e-103
Identity = 143/211 (67.77%), Postives = 180/211 (85.31%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVG---ASNNAISLLDDAATESKPGCC 210
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR++TF+H+ +WL+DA  HS+S+M I+L+GNK+DLE RREV KE+GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA  IYEK++ G  D+++E +G+K+G   A+ NA    +    ++  GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC 212          
BLAST of Gvermi6973.t1 vs. uniprot
Match: RAB2A_CHICK (Ras-related protein Rab-2A n=65 Tax=Euteleostomi TaxID=117571 RepID=RAB2A_CHICK)

HSP 1 Score: 305 bits (782), Expect = 2.920e-103
Identity = 143/211 (67.77%), Postives = 180/211 (85.31%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVG---ASNNAISLLDDAATESKPGCC 210
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR++TF+H+ +WL+DA  HS+S+M I+L+GNK+DLE RREV KE+GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA  IYEK++ G  D+++E +G+K+G   A+ NA    +    ++  GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATLAGNQGGQQAGGGCC 212          
BLAST of Gvermi6973.t1 vs. uniprot
Match: K7FZ75_PELSI (Uncharacterized protein n=23 Tax=Amniota TaxID=32524 RepID=K7FZ75_PELSI)

HSP 1 Score: 305 bits (782), Expect = 2.920e-103
Identity = 143/211 (67.77%), Postives = 180/211 (85.31%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVG---ASNNAISLLDDAATESKPGCC 210
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR++TF+H+ +WL+DA  HS+S+M I+L+GNK+DLE RREV KE+GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA  IYEK++ G  D+++E +G+K+G   A+ NA    +    ++  GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVRKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATLAGNQGGQQAGGGCC 212          
BLAST of Gvermi6973.t1 vs. uniprot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A n=7 Tax=Tetrapoda TaxID=32523 RepID=RAB2A_MOUSE)

HSP 1 Score: 305 bits (781), Expect = 4.140e-103
Identity = 143/211 (67.77%), Postives = 180/211 (85.31%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVG---ASNNAISLLDDAATESKPGCC 210
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR++TF+H+ +WL+DA  HS+S+M I+L+GNK+DLE RREV KE+GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA  IYEK++ G  D+++E +G+K+G   A+ NA    +    ++  GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHGSNQGGQQAGGGCC 212          
BLAST of Gvermi6973.t1 vs. uniprot
Match: RAB2A_RABIT (Ras-related protein Rab-2A n=4 Tax=Boreoeutheria TaxID=1437010 RepID=RAB2A_RABIT)

HSP 1 Score: 304 bits (779), Expect = 8.350e-103
Identity = 142/211 (67.30%), Postives = 179/211 (84.83%), Query Frame = 0
Query:    3 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETSAKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVG---ASNNAISLLDDAATESKPGCC 210
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR++TF+H+ +WL+DA  HS+S+M I+L+GNK+DLE RREV KE+GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA  IYEK++ G  D+++E +G+K+G    + NA    +    ++  GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHGATNATHAGNQGGQQAGGGCC 212          
The following BLAST results are available for this feature:
BLAST of Gvermi6973.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5L8_9FLOR2.470e-13893.33Ras-related protein Rab-2A n=1 Tax=Gracilariopsis ... [more]
A0A5J4Z8C3_PORPP6.390e-11479.62Ras-related protein Rab-2A n=1 Tax=Porphyridium pu... [more]
A0A7S0ZE95_9RHOD1.420e-11185.41Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A1Y1XI96_9FUNG1.650e-10470.28Ras-domain-containing protein n=1 Tax=Basidiobolus... [more]
A0A830HTH3_9CHLO1.020e-10368.72Rab-2A protein n=1 Tax=Pycnococcus provasolii TaxI... [more]
RAB2A_HUMAN2.050e-10367.77Ras-related protein Rab-2A n=64 Tax=Amniota TaxID=... [more]
RAB2A_CHICK2.920e-10367.77Ras-related protein Rab-2A n=65 Tax=Euteleostomi T... [more]
K7FZ75_PELSI2.920e-10367.77Uncharacterized protein n=23 Tax=Amniota TaxID=325... [more]
RAB2A_MOUSE4.140e-10367.77Ras-related protein Rab-2A n=7 Tax=Tetrapoda TaxID... [more]
RAB2A_RABIT8.350e-10367.30Ras-related protein Rab-2A n=4 Tax=Boreoeutheria T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 8..29
score: 51.86
coord: 49..71
score: 50.95
coord: 31..47
score: 32.83
coord: 111..124
score: 51.38
coord: 146..168
score: 46.35
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 13..208
e-value: 5.2E-7
score: 39.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 5..171
e-value: 1.2E-35
score: 134.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 8..171
e-value: 2.1E-100
score: 349.5
NoneNo IPR availablePANTHERPTHR47979DRAB11-RELATEDcoord: 3..196
NoneNo IPR availablePANTHERPTHR47979:SF12RAS-RELATED PROTEIN RAB-2Acoord: 3..196
NoneNo IPR availablePROSITEPS51420RHOcoord: 1..174
score: 8.933252
NoneNo IPR availablePROSITEPS51419RABcoord: 3..210
score: 35.186878
NoneNo IPR availableCDDcd01866Rab2coord: 4..171
e-value: 1.40271E-115
score: 324.376
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 10..171
e-value: 7.9E-11
score: 19.4
IPR001806Small GTPasePFAMPF00071Rascoord: 9..169
e-value: 5.9E-60
score: 201.5
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..198
score: 19.875528
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 8..162
e-value: 2.1E-29
score: 100.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..193
e-value: 3.7E-69
score: 234.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:788599..789372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6973.t1Gvermi6973.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 788599..789372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6973.t1 ID=Gvermi6973.t1|Name=Gvermi6973.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=211bp
MTSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVT
VEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILS
WLQDATAHSSSDMTIILVGNKADLEHRREVAKEDGEAFAKEHGLLFLETS
AKNNTNVEEAFLTTAATIYEKVKAGDLDLSSERHGVKVGASNNAISLLDD
AATESKPGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase