Gvermi6964.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6964.t1
Unique NameGvermi6964.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length146
Homology
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A2V3J4C1_9FLOR (Actophorin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4C1_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 1.500e-64
Identity = 90/145 (62.07%), Postives = 120/145 (82.76%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIMNREHRAAVFKINDTMDEVQLESTAPVADGAAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQHTAGY 145
            M SGVAVDNKVVS FK IM+R+ RAA+FKIN  +  +++E TAPV  GA K SW++  K LP+TDCRY+AYDF YEHQGA KNR++F+LWSP+ +  +SKM+YA+S+EG+V  L+GVQR+++ ND D+++Y+AI+KKLAQHTAGY
Sbjct:    1 MSSGVAVDNKVVSIFKEIMSRKFRAAIFKINGDLTLIEVEDTAPVEAGAPKGSWDAMCKKLPETDCRYLAYDFEYEHQGAKKNRIIFVLWSPDSAPTKSKMVYAASREGIVSQLQGVQRAIEANDDDEIDYNAISKKLAQHTAGY 145          
BLAST of Gvermi6964.t1 vs. uniprot
Match: R7QGC0_CHOCR (ADF-H domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC0_CHOCR)

HSP 1 Score: 181 bits (459), Expect = 3.650e-56
Identity = 89/146 (60.96%), Postives = 108/146 (73.97%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIMN-REHRAAVFKINDTMDEVQLESTAPVADGAAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQHTAGY 145
            M SGV VD K V + ++++  R+ R AVF+I+D M  V+LE T   +D + K+ W+SFTK LP+ DCRYI YDF Y HQGA K RVLF+LWSPE SKV+SKMIYASSQEGVV   EG+QR LQ  D +DLEY  IAK+LA HTAGY
Sbjct:    1 MASGVQVDAKCVDAIQALVKGRKFRGAVFRISDDMSLVELEKTYDPSDASPKADWDSFTKDLPEKDCRYIVYDFSYVHQGATKQRVLFVLWSPEYSKVKSKMIYASSQEGVVNKFEGIQRQLQCTDAEDLEYDVIAKQLAAHTAGY 146          
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A7S1XF39_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF39_9RHOD)

HSP 1 Score: 166 bits (420), Expect = 3.120e-50
Identity = 82/146 (56.16%), Postives = 106/146 (72.60%), Query Frame = 0
Query:    1 MVSGVAVDNK-VVSSFKSIMNREHRAAVFKINDTMDEVQLESTAPVADGAAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQHTAGY 145
            M SGV VD + +V +   +  R++RA + KIND+M  V++E T PVA G AK+ +    K+LP+ DCRY+ YDF YE QG NKN+V+F+LWSPE SKV+SKMIYASSQEGVV  L+G+ R LQ  D D+L+Y+ IAK L QHTA Y
Sbjct:    1 MASGVGVDQQCIVDTQHLVKERKYRAVILKINDSMTLVEVEKTFPVAHGDAKTHYMEVAKTLPEDDCRYLVYDFEYEMQGINKNKVVFLLWSPECSKVKSKMIYASSQEGVVNALQGISRQLQATDVDELDYAHIAKHLKQHTASY 146          
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A1X6PG98_PORUM (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG98_PORUM)

HSP 1 Score: 165 bits (418), Expect = 6.480e-50
Identity = 79/147 (53.74%), Postives = 108/147 (73.47%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIMN-REHRAAVFKINDTMDEVQLESTAPVADGAAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHL-EGVQRSLQINDKDDLEYSAIAKKLAQHTAGY 145
            M SGVAV+   V++   ++  R+HRA VF IND M E++LE T P    +A++ ++ FTKSLPD  CRY  YDF YEHQGA KNR++F+LWS + +KVR+K+IY+SS EG+V  L  GVQR +Q+ D+D+L +S ++KKL QHTAGY
Sbjct:    1 MASGVAVNPTCVTAMNDLVKERKHRAVVFAINDDMTEIKLEKTFPPNASSAQAGYDEFTKSLPDDSCRYAVYDFEYEHQGAKKNRIIFVLWSSDLAKVRTKLIYSSSAEGLVSKLGAGVQRQIQVTDRDELSFSEVSKKLVQHTAGY 147          
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A6T6CIG9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CIG9_9RHOD)

HSP 1 Score: 157 bits (398), Expect = 7.330e-47
Identity = 81/148 (54.73%), Postives = 103/148 (69.59%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIM-NREHRAAVFKINDTMDEVQLEST-APVADG-AAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQHTAGY 145
            M SGVAVD K V  F++++ +R++R  V KIND M  + +E T +P+  G    + W  FTK+LP+ DCRYI YDF YE QG  KNRV+F+LWSPE SKV+SKMIYASSQEG V  +EG+QR LQ  D D++ Y  IA +L Q TA Y
Sbjct:    1 MASGVAVDPKCVEEFQALVRSRKYRGLVMKINDEMTSIGVERTLSPIQQGDKVDAKWTEFTKTLPENDCRYIVYDFEYEMQGIKKNRVIFMLWSPEYSKVKSKMIYASSQEGCVNAMEGIQRQLQSCDMDEMAYEYIANQLKQFTASY 148          
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A7S1TF15_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TF15_9RHOD)

HSP 1 Score: 150 bits (379), Expect = 5.300e-44
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIMN-REHRAAVFKINDTMDEVQLESTAPVADGAAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQHTAGY 145
            M SG+ +D + +    +++  R++RA V +IND M  V++E   P   G+ K+++   TKSLP  DCR+  YDF +E QG  KN+V+FILWSPE SKVRSKMIYA+SQEGV+  L+G+ R +Q  D D+L Y  +A  L QHTAGY
Sbjct:    1 MASGLGLDPQCLEETNALVKGRKYRAIVLRINDKMTSVEVERVLPTVPGSVKAAYMELTKSLPANDCRFFIYDFEFEMQGITKNKVVFILWSPEYSKVRSKMIYAASQEGVLTALDGISRQMQATDLDELSYDYVAAHLRQHTAGY 146          
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A5J4YTF8_PORPP (Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTF8_PORPP)

HSP 1 Score: 136 bits (343), Expect = 2.410e-38
Identity = 62/131 (47.33%), Postives = 89/131 (67.94%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIMNREHRAAVFKINDTMDEVQLESTAPVADG---AAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDD 128
            M SGVAVD   + SF  +  R+ RA V KIND M ++++E T P   G    A++ W+    SLP+ DCR++ YDF+YEHQG  K++++F+ W+PE +K++SK IYASSQEG +  +EGV R LQ  D+D+
Sbjct:    1 MSSGVAVDPSCIESFNGLKKRDVRAVVMKINDGMTKIEVEKTMPTGSGDVGTAEAEWKECIDSLPENDCRFLLYDFLYEHQGLPKSKIVFLKWAPETAKIKSKTIYASSQEGCLNQMEGVGRQLQATDEDE 131          
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A1X6P6I6_PORUM (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6I6_PORUM)

HSP 1 Score: 129 bits (324), Expect = 1.040e-35
Identity = 62/142 (43.66%), Postives = 93/142 (65.49%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIMN-REHRAAVFKINDTMDEVQLESTAPVADGAAKSSWESFTKSLPDTDCRYIAYDFVYEHQGA-NKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQ 140
            M SG+AV++K +  ++++   R HRA + KIND M EV ++S  P + G  +  W+ F K LP++DCRY+  DF ++ Q    K+++  ILWSPE S+VRSKMIYA+SQE V   +  VQR LQ  + ++LEY  I  ++A+
Sbjct:    1 MASGIAVNDKCIQEYQALSRARTHRAVILKINDDMSEVVVDSILPKSQGDHEGDWKDFVKLLPESDCRYVVVDFEWKDQPTVTKSKICLILWSPEYSRVRSKMIYAASQEAVASKMADVQRQLQATELEELEYGVIKNQVAK 142          
BLAST of Gvermi6964.t1 vs. uniprot
Match: M2VTA1_GALSU (Cofilin /actin depolymerizing factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTA1_GALSU)

HSP 1 Score: 124 bits (311), Expect = 1.300e-33
Identity = 58/145 (40.00%), Postives = 96/145 (66.21%), Query Frame = 0
Query:    1 MVSGVAVDNKVVSSFKSIMN---REHRAAVFKINDTMDEVQLESTAP---VADGAAKSSWESFTKSLPDTDCRYIAYDFVYE-HQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKL 138
            M SGVAVD+     F  ++    R++RA VFK++D +  V +E T P   +    A+  W+ F   LP+ DCR+  YDF Y+  +G +KNR++F+LWSPE +K++SKM+Y+SS+E +V+ L GVQ+ +Q  D+D++E+  + +++
Sbjct:    1 MASGVAVDDICGKEFTVLVRSTPRKYRAIVFKLSDDLSSVCVEKTLPSSNITKCTAQEDWKKFVTELPENDCRFAVYDFEYQTSEGVSKNRIIFVLWSPESAKIKSKMLYSSSREALVQKLNGVQKEIQATDQDEIEFHNVYQQV 145          
BLAST of Gvermi6964.t1 vs. uniprot
Match: A0A7S1A8Q4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A8Q4_NOCSC)

HSP 1 Score: 118 bits (295), Expect = 7.950e-32
Identity = 50/99 (50.51%), Postives = 71/99 (71.72%), Query Frame = 0
Query:   47 DGAAKSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSKMIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQHTAGY 145
            +GAA   W +  K LP++DCR++ YDF YEHQG  K++++F+ W+PE +K+++KMIYASSQEG +  +EG+ R LQ  D+D+ EY  I K LA   AGY
Sbjct:    4 EGAASEKWAATVKELPESDCRFLIYDFEYEHQGLPKSKLIFMKWAPETAKIKAKMIYASSQEGCLNSMEGIGRQLQCTDEDEAEYETIVKTLAATQAGY 102          
The following BLAST results are available for this feature:
BLAST of Gvermi6964.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4C1_9FLOR1.500e-6462.07Actophorin n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
R7QGC0_CHOCR3.650e-5660.96ADF-H domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S1XF39_9RHOD3.120e-5056.16Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6PG98_PORUM6.480e-5053.74ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
A0A6T6CIG9_9RHOD7.330e-4754.73Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TF15_9RHOD5.300e-4449.32Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YTF8_PORPP2.410e-3847.33Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688... [more]
A0A1X6P6I6_PORUM1.040e-3543.66ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
M2VTA1_GALSU1.300e-3340.00Cofilin /actin depolymerizing factor n=1 Tax=Galdi... [more]
A0A7S1A8Q4_NOCSC7.950e-3250.51Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017904ADF/CofilinPRINTSPR00006COFILINcoord: 86..107
score: 59.09
coord: 65..85
score: 41.9
coord: 108..124
score: 29.41
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 3..139
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 3..138
e-value: 7.75025E-44
score: 138.844
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 9..139
e-value: 4.2E-30
score: 116.0
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..137
e-value: 8.8E-31
score: 106.3
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 4..139
score: 32.233597
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..143
e-value: 7.2E-43
score: 148.1
NoneNo IPR availablePANTHERPTHR11913:SF12COFILIN/ACTIN-DEPOLYMERIZING FACTOR HOMOLOG-RELATEDcoord: 3..139
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:767742..768179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6964.t1Gvermi6964.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 767742..768179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6964.t1 ID=Gvermi6964.t1|Name=Gvermi6964.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=146bp
MVSGVAVDNKVVSSFKSIMNREHRAAVFKINDTMDEVQLESTAPVADGAA
KSSWESFTKSLPDTDCRYIAYDFVYEHQGANKNRVLFILWSPEESKVRSK
MIYASSQEGVVKHLEGVQRSLQINDKDDLEYSAIAKKLAQHTAGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf