Gvermi6953.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6953.t1
Unique Name	Gvermi6953.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	202

Homology

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BLAST of Gvermi6953.t1 vs. uniprot
Match: A0A2V3J5I9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5I9_9FLOR)

HSP 1 Score: 154 bits (390), Expect = 1.290e-43
Identity = 82/100 (82.00%), Postives = 92/100 (92.00%), Query Frame = 0

Query:    1 MVVSEIVAATMIAVYGFRNSYRIVLKTERLIRRKIRRPAPIIEGYHTFPRFFIRKVFRAGLEIAMRWEGRAKNAAQMAADARLRAKRTSQAVAHRIEDAR 100
            MVVSEIVAATMIAV G +NSYRIVLK ER++RR IRRPAPI+EGY TFPRFFIRKVFRAGL IAMRWEGRAKNAAQ+AADAR+RA++TS+AV+ RI DAR
Sbjct:    1 MVVSEIVAATMIAVCGLKNSYRIVLKGERVVRRAIRRPAPIVEGYDTFPRFFIRKVFRAGLVIAMRWEGRAKNAAQLAADARMRARKTSKAVSKRIGDAR 100

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BLAST of Gvermi6953.t1 vs. uniprot
Match: R7QKR1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKR1_CHOCR)

HSP 1 Score: 131 bits (330), Expect = 2.200e-34
Identity = 67/87 (77.01%), Postives = 78/87 (89.66%), Query Frame = 0

Query:   11 MIAVYGFRNSYRIVLKTERLIRRKIRRPAPIIEGYHTFPRFFIRKVFRAGLEIAMRWEGRAKNAAQMAADARLRAKRTSQAVAHRIE 97
            MIAV GFRNSYRI+LK ERLIRRKIRRP+ I+EGY +FPR+FIR+VFRAGL IAMRWEGRAKNAAQMAADAR+RA+   +AV+ R+E
Sbjct:    1 MIAVCGFRNSYRIILKGERLIRRKIRRPSSIVEGYDSFPRYFIRRVFRAGLVIAMRWEGRAKNAAQMAADARMRARSAQKAVSSRVE 87

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BLAST of Gvermi6953.t1 vs. uniprot
Match: A0A1X6NME6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NME6_PORUM)

HSP 1 Score: 92.0 bits (227), Expect = 7.410e-19
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0

Query:   11 MIAVYGFRNSYRIVLKTERLIRRKIRRPAPIIEGYHTFPRFFIRKVFRAGLEIAMRWEGRAKNAAQMAADAR 82
            MIAV G + SYRIVL  ER +RR+I R +PII GY+TFPRFFIR+VF+AGL IA+R EGRAK AA+ AA AR
Sbjct:    1 MIAVCGLQRSYRIVLNVERGVRRRIGRESPIIAGYNTFPRFFIRRVFQAGLAIALRMEGRAKTAARRAATAR 72

The following BLAST results are available for this feature:

BLAST of Gvermi6953.t1 vs. uniprot

BLAST of Gvermi6953.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2V3J5I9_9FLOR	1.290e-43	82.00	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QKR1_CHOCR	2.200e-34	77.01	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A1X6NME6_PORUM	7.410e-19	68.06	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..162
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..201
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24229	contig	ScGOVlb_24229:737907..738819 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6953.t1	Gvermi6953.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24229 737907..738819 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6953.t1 ID=Gvermi6953.t1|Name=Gvermi6953.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=202bp
MVVSEIVAATMIAVYGFRNSYRIVLKTERLIRRKIRRPAPIIEGYHTFPR
FFIRKVFRAGLEIAMRWEGRAKNAAQMAADARLRAKRTSQAVAHRIEDAR
HRAEDVRHRAHIVRERAAEVRDRAKDQTRIMREKAAELRQRAEHAKDRAV
AAKDKLMDIKDKVQARVSPKAKSRKFFSAAHTIMPPESKPLPMVHTRISE
T*