Gvermi6950.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6950.t1
Unique Name	Gvermi6950.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	148

Homology

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BLAST of Gvermi6950.t1 vs. uniprot
Match: V5NG23_GRALE (Ubiquitin-conjugating enzyme n=3 Tax=Rhodymeniophycidae TaxID=2045261 RepID=V5NG23_GRALE)

HSP 1 Score: 305 bits (781), Expect = 3.450e-105
Identity = 143/147 (97.28%), Postives = 146/147 (99.32%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 147
            MALKRIKKELQDLGKDPPSNCSAGPA+DDLFNWQA+IMGPPDSPYSGGVYFL IHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ
Sbjct:    1 MALKRIKKELQDLGKDPPSNCSAGPAADDLFNWQASIMGPPDSPYSGGVYFLNIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 147

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BLAST of Gvermi6950.t1 vs. uniprot
Match: R7QFA7_CHOCR (UBC core domain-containing protein n=3 Tax=Rhodophyta TaxID=2763 RepID=R7QFA7_CHOCR)

HSP 1 Score: 299 bits (766), Expect = 6.700e-103
Identity = 140/147 (95.24%), Postives = 143/147 (97.28%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 147
            MALKRI KELQDLGKDPPSNCSAGPA DDLF+WQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISF TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQTYKTNR RYE+TAREWTRKYAQ
Sbjct:    1 MALKRINKELQDLGKDPPSNCSAGPAGDDLFHWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFTTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRQRYEETAREWTRKYAQ 147

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BLAST of Gvermi6950.t1 vs. uniprot
Match: M2XRN0_GALSU (Ubiquitin-conjugating enzyme E2 n=4 Tax=Bangiophyceae TaxID=2797 RepID=M2XRN0_GALSU)

HSP 1 Score: 283 bits (725), Expect = 1.200e-96
Identity = 130/146 (89.04%), Postives = 137/146 (93.84%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MA KRI KELQDLG+DPPSNCSAGP  DDLF+WQATIMGPPDSPY+GGV+FL IHFPTDYPFKPPK+ F TRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ YKTNR +YE+TAREWTRKYA
Sbjct:    1 MATKRITKELQDLGRDPPSNCSAGPVGDDLFHWQATIMGPPDSPYAGGVFFLNIHFPTDYPFKPPKVQFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQLYKTNRGKYEETAREWTRKYA 146

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BLAST of Gvermi6950.t1 vs. uniprot
Match: A0A194W8P5_9PEZI (UBC core domain-containing protein n=11 Tax=leotiomyceta TaxID=716546 RepID=A0A194W8P5_9PEZI)

HSP 1 Score: 276 bits (707), Expect = 6.680e-94
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICS+LTDPNPDDPLVPEIA  YKTNRA+YE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTNRAQYESTAREWTRKYA 146

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BLAST of Gvermi6950.t1 vs. uniprot
Match: R7YU66_CONA1 (Ubiquitin-conjugating enzyme E2-16 kDa n=9 Tax=leotiomyceta TaxID=716546 RepID=R7YU66_CONA1)

HSP 1 Score: 276 bits (706), Expect = 9.490e-94
Identity = 128/146 (87.67%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  DDLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPIGDDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 146

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BLAST of Gvermi6950.t1 vs. uniprot
Match: A0A7J7IE24_9RHOD (Ubiquitin-conjugating enzyme E2 4 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IE24_9RHOD)

HSP 1 Score: 275 bits (704), Expect = 1.920e-93
Identity = 125/146 (85.62%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLGKDPP+NCSAGP  DDLF+WQATI+GPPDSPY+GGVYFL IHFPTDYPFKPPK+ F T+IYHPNINSNGSICLDILR+QWSPALTISKVLLSICSLLTDPNPDDPLVP+IA  YKTNRA+YE+ AREWTR+YA
Sbjct:    1 MALKRISKELVDLGKDPPANCSAGPVGDDLFHWQATIIGPPDSPYAGGVYFLNIHFPTDYPFKPPKVQFTTKIYHPNINSNGSICLDILREQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAHKYKTNRAKYEEEAREWTRRYA 146

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BLAST of Gvermi6950.t1 vs. uniprot
Match: H1VKL9_COLHI (Ubiquitin conjugating enzyme n=42 Tax=Sordariomycetes TaxID=147550 RepID=H1VKL9_COLHI)

HSP 1 Score: 275 bits (703), Expect = 2.720e-93
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 146

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BLAST of Gvermi6950.t1 vs. uniprot
Match: A0A1E3QAQ6_LIPST (UBC core domain-containing protein n=5 Tax=saccharomyceta TaxID=716545 RepID=A0A1E3QAQ6_LIPST)

HSP 1 Score: 275 bits (702), Expect = 3.870e-93
Identity = 126/146 (86.30%), Postives = 137/146 (93.84%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPY+GGV+FL+IHFPTDYPFKPPK+SF TRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICS+LTDPNPDDPLVPEIA  YKT+RA+YE TAREWTRKYA
Sbjct:    1 MALKRISKELSDLGRDPPSSCSAGPIGEDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVSFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRAKYEATAREWTRKYA 146

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BLAST of Gvermi6950.t1 vs. uniprot
Match: S3CVI1_OPHP1 (Ubiquitin conjugating enzyme n=2 Tax=Ascomycota TaxID=4890 RepID=S3CVI1_OPHP1)

HSP 1 Score: 275 bits (702), Expect = 3.870e-93
Identity = 126/146 (86.30%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICS+LTDPNPDDPLVPEIA  YKT+RA+YE TAREWTRKYA
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRAKYEGTAREWTRKYA 146

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BLAST of Gvermi6950.t1 vs. uniprot
Match: A0A166RZY3_9PEZI (Ubiquitin-conjugating enzyme E2-16 kDa (Fragment) n=2 Tax=Colletotrichum spaethianum species complex TaxID=2707349 RepID=A0A166RZY3_9PEZI)

HSP 1 Score: 275 bits (703), Expect = 5.210e-93
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0

Query:    1 MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 146
            MALKRI KEL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:   20 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 165

The following BLAST results are available for this feature:

BLAST of Gvermi6950.t1 vs. uniprot

BLAST of Gvermi6950.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
V5NG23_GRALE	3.450e-105	97.28	Ubiquitin-conjugating enzyme n=3 Tax=Rhodymeniophy...	[more]
R7QFA7_CHOCR	6.700e-103	95.24	UBC core domain-containing protein n=3 Tax=Rhodoph...	[more]
M2XRN0_GALSU	1.200e-96	89.04	Ubiquitin-conjugating enzyme E2 n=4 Tax=Bangiophyc...	[more]
A0A194W8P5_9PEZI	6.680e-94	86.99	UBC core domain-containing protein n=11 Tax=leotio...	[more]
R7YU66_CONA1	9.490e-94	87.67	Ubiquitin-conjugating enzyme E2-16 kDa n=9 Tax=leo...	[more]
A0A7J7IE24_9RHOD	1.920e-93	85.62	Ubiquitin-conjugating enzyme E2 4 n=2 Tax=Cyanidia...	[more]
H1VKL9_COLHI	2.720e-93	86.99	Ubiquitin conjugating enzyme n=42 Tax=Sordariomyce...	[more]
A0A1E3QAQ6_LIPST	3.870e-93	86.30	UBC core domain-containing protein n=5 Tax=sacchar...	[more]
S3CVI1_OPHP1	3.870e-93	86.30	Ubiquitin conjugating enzyme n=2 Tax=Ascomycota Ta...	[more]
A0A166RZY3_9PEZI	5.210e-93	86.99	Ubiquitin-conjugating enzyme E2-16 kDa (Fragment) ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..147
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..147 e-value: 1.5E-76 score: 270.3
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..145
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..145
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..147 e-value: 3.3E-74 score: 249.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..146
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..141 e-value: 5.6E-54 score: 181.6
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..147 score: 61.499111
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 4..142 e-value: 1.37033E-72 score: 212.062
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 74..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24229	contig	ScGOVlb_24229:727175..728071 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6950.t1	Gvermi6950.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24229 727175..728071 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6950.t1 ID=Gvermi6950.t1|Name=Gvermi6950.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=148bp
MALKRIKKELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVY
FLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTIS
KVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2
IPR023313	UBQ-conjugating_AS