Gvermi6940.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6940.t1
Unique NameGvermi6940.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length809
Homology
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BLAST of Gvermi6940.t1 vs. uniprot
Match: A0A2V3INM1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM1_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 3.580e-21
Identity = 89/268 (33.21%), Postives = 118/268 (44.03%), Query Frame = 0 
Query:  531 LSTVFFDTEFLSLIDNNFRVPVVSRDNSLQEAARICGQISCTLDRRRRSSS-------EAGHCLPTAGISPYLSY----LYVEPEPRHASSTPGW--------------IAEL---------------------------QEYFATARTPVSANFQRRTYLNMSEHDERRAPAAAWHFDKTNFSPNTDKLTEFSPV--SSHVAYGTATSIRGHGSYYSNQGVHSSPGDTSVALNFGFQTRTNYPIRKTYLHTHNPKAVSREEGLTQPA 744
            LS  FFD E   L D  FR+    R+ S+ +A  +C Q       R+  +S         G     +    +L Y     +   + +HASS                  I+EL                           QE  A  R+    NFQRRTYLNMSE DERR   AAW  D T ++P ++ L + S    SSHVAY  A++ R H SY++ + VH +P DT+ ALNFGFQ RTNYP R T+     P     +E L+  A
Sbjct:  707 LSAHFFDQELHELFDEKFRLTHAPREQSMIKATALCEQFPSPKSERQSPTSLIKGLVNRTGPLFSLSEPDAHLHYSTTCTHRSDKSQHASSLSNSEPHTIFPSSLYNSEISELSPFIRDLPPGRRDVTESPLPSESKNGIQELPAVGRSSSVNNFQRRTYLNMSELDERRYATAAWQPDITCYTPLSNGLIQPSGQRQSSHVAYAFASNKRAH-SYHTGRAVHCAPTDTTTALNFGFQRRTNYPFRTTHRKQPTPVGRGADEPLSSAA 973
The following BLAST results are available for this feature:
BLAST of Gvermi6940.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INM1_9FLOR3.580e-2133.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:702754..705180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6940.t1Gvermi6940.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 702754..705180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6940.t1 ID=Gvermi6940.t1|Name=Gvermi6940.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=809bp
MASSRTRPPGSLERNGAQSSRPSSQRTASQHLFPSHHTDDELFAARVAAL
IAERHRLLRKGLIHRLQHLKAALLSTELNHDLESAEQPRLRLEQDRDGAP
ENSSPAQLLRPYKDSALSLHPSVSVSIRNRASTALPHADHYSPSQSGENS
SAENQGFPKERAARPSLPYDLRTHAEDANRTEQSDKLLSTVASGDHAQCD
FPQLPHSYSQQILHSRTLPKCVTGDAASTTSLRSLLLISQPLEGDLQSST
EPMSKTIVPSPPLFNASEPAQSKEYPQVFENKPLTRQLHPSASTAVEHGG
KDQLSNVFRNALEEPGPHEFQNAHFETENRYSSEESYHSLRTISSRRNGS
ETQYSNNATEESGPVHGVAHPSGQSSAVEVRDLRRDSASPISPLFRSELQ
LFSKFSADISEPVDSRRWRFRDASAKYRASAVAPTGSLVSQIERKNTVSV
SGTSEDLHGDRPSLDLSLLLKDSLSGLLSRSPGFSRSELAQVINSSKSLP
GRDAQTTEFEEIQIPDVLDPSTGVRKHLTLLSTVFFDTEFLSLIDNNFRV
PVVSRDNSLQEAARICGQISCTLDRRRRSSSEAGHCLPTAGISPYLSYLY
VEPEPRHASSTPGWIAELQEYFATARTPVSANFQRRTYLNMSEHDERRAP
AAAWHFDKTNFSPNTDKLTEFSPVSSHVAYGTATSIRGHGSYYSNQGVHS
SPGDTSVALNFGFQTRTNYPIRKTYLHTHNPKAVSREEGLTQPAHALFRN
EPMSKELLAQTRAAALEGISMGPYDADSLVRDELGSDEDIPVYSIDHEGR
VIAGRHQP*
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