Gvermi6932.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6932.t1
Unique NameGvermi6932.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length299
Homology
BLAST of Gvermi6932.t1 vs. uniprot
Match: A0A2V3IXJ3_9FLOR (C2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ3_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 9.550e-71
Identity = 110/134 (82.09%), Postives = 121/134 (90.30%), Query Frame = 0
Query:  163 MVNVEGKISVWIKSGSFSHASDLYIKVLIDDNDIWKTEDKDGFSPDWDSTVVKHIKGDYEKIILKLMDEDTFSRDDVIATAEFSIADLLDDGINDDAVPMRDADGNDVGTLAVNINFEEGDVNMFDLLGSMLHK 296
            M  VEGKIS+WIKSGSF+H SDLYI+VLIDDN IWKTE+KDGF+PD+DSTVVKHIKGDYEKI+L+LMDEDT +RDDVIATAEF IADLLDDGINDD+V M DADGN+VGTL VNINFE GDVN F L GSMLHK
Sbjct:    1 MAEVEGKISIWIKSGSFNHGSDLYIQVLIDDNSIWKTEEKDGFTPDFDSTVVKHIKGDYEKIVLRLMDEDTCTRDDVIATAEFPIADLLDDGINDDSVSMCDADGNEVGTLGVNINFEAGDVNAFQLFGSMLHK 134          
BLAST of Gvermi6932.t1 vs. uniprot
Match: R7QFN6_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN6_CHOCR)

HSP 1 Score: 199 bits (507), Expect = 2.690e-61
Identity = 99/133 (74.44%), Postives = 116/133 (87.22%), Query Frame = 0
Query:  166 VEGKISVWIKSGSFSHASDLYIKVLIDDNDIWKTEDKDGFSPDWDSTVVKHIKGDYEKIILKLMDEDTFSRDDVIATAEFSIADLLDDGINDDAVPMRDADGNDVGTLAVNINFEEGDVNMFDLLGSMLHKDD 298
            +EGK+S+WIK GSFSH+SDLY+KVLIDD ++WKT++KDG SPDWDSTVVKHIKG+YEKIILKLMDEDTFSRDDVI T EF I D +  GIN  +  ++DA+ N VGT+ VNINFEEGDV+MFDLLGSMLHKDD
Sbjct:    1 MEGKLSIWIKGGSFSHSSDLYMKVLIDDKEVWKTDEKDGSSPDWDSTVVKHIKGEYEKIILKLMDEDTFSRDDVIGTVEFPICDTVS-GING-SFDVKDAEDNSVGTVDVNINFEEGDVSMFDLLGSMLHKDD 131          
BLAST of Gvermi6932.t1 vs. uniprot
Match: R7QFN2_CHOCR (J domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN2_CHOCR)

HSP 1 Score: 121 bits (303), Expect = 7.850e-28
Identity = 68/149 (45.64%), Postives = 94/149 (63.09%), Query Frame = 0
Query:    1 MPADLNDSLGAIFSDLFSGVAGAVGPN---GVVEDFVEFLERRVGGFGTGG--------DDGLRDVLRSDDQHVLEAEVEDARFVLRQIRARRARVHDEQRALRRRAEDWAARAERADALRQYDVRDAARERXXXXXXXXXXFGKRAAK 138
            MP DLNDS G+IFSDLFSGVAGA       G+++DFV+FLE +V GFG           DDGL D+L+S D  VL+AE++DA FVL+Q+  R++++ +E  +L++RA++W  RA RA+    Y  RD A+ER          F  R+ K
Sbjct:  213 MPKDLNDSFGSIFSDLFSGVAGAASGATRPGIMDDFVDFLENQVDGFGVDSSGYASDDEDDGLSDILKSSDVDVLQAEIDDAHFVLQQLETRQSKLDEEAASLQKRADEWRVRANRAEGSMDYTTRDTAKERASDLKAEAKRFSSRSRK 361          
BLAST of Gvermi6932.t1 vs. uniprot
Match: A0A1X6PG20_PORUM (C2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG20_PORUM)

HSP 1 Score: 77.8 bits (190), Expect = 4.160e-14
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 0
Query:  163 MVNVEGKISVWIKSGSFSHASDLYIKVLIDDNDIWKTEDKDGFSPDWDSTVVKHIKGDYEKIILKLMDEDTFSRDDVIATAEFSIADLLDDGINDDAVPMRDADGNDVGTLAVNINFEEGDVNMFDLLGSMLHKDD 298
            MV +EGK++  + SGS     D Y  V +    + KT   D  +P+W+ T   HIKGDYE++ + + ++D FS DD + +    ++ L    +N     ++  +G   G +    +FE G+V++FD L   LH  D
Sbjct:    1 MVQMEGKLTAVLMSGSDLKGDDAYAIVKLGKKQVIKTNKDDSHNPEWNFTREVHIKGDYEEMTIAVYEDDDFSSDDFLGSVTIPVSRLSGGPVNG-TFALQTKEGEPAGEIKAIFSFEAGEVSIFDQLKDKLHDSD 135          
BLAST of Gvermi6932.t1 vs. uniprot
Match: M1UP50_CYAM1 (Similar to heat shock protein dnaJ n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UP50_CYAM1)

HSP 1 Score: 65.9 bits (159), Expect = 1.450e-8
Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    2 PADLNDSLGAIFSDLFSGVAG----AVGPNGVVEDFVEFLERRVGGFGTGGDDGLRDVLRSDDQHVLEAEVEDARFVLRQIRAR 81
            P DLNDS GAIFSDL   +          NG+  DFVEFLE +   +G+  ++ L  VL S D+ VL+AE++DARFV  Q   R
Sbjct:  161 PEDLNDSFGAIFSDLMEQLGRLWQEGTKENGIFADFVEFLESQGANWGSLRNEDLNSVLTSSDEDVLQAELDDARFVREQCEQR 244          
BLAST of Gvermi6932.t1 vs. uniprot
Match: A0A7S0ZDX1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDX1_9RHOD)

HSP 1 Score: 61.6 bits (148), Expect = 1.350e-7
Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 0
Query:    6 NDSLGAIFSDLFSGVAGAVGP-----NGVVEDFVEFLERRVG-GFGTGGDDG-----LRDVLRSDDQHVLEAEVEDARFVLRQIRARRARVHDEQRA 91
            +DS GAIFSD  SG+A  +        GVVEDFVEFLE++VG GFG              +L+  +  +L AE+ED  FVL+Q+  R  R++ + RA
Sbjct:   15 DDSFGAIFSDFVSGIASGISGAGARGGGVVEDFVEFLEKQVGVGFGVSEPTSTEAKEFESLLKYGNVQILNAELEDVEFVLKQLNERLERINVQVRA 111          
The following BLAST results are available for this feature:
BLAST of Gvermi6932.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IXJ3_9FLOR9.550e-7182.09C2 domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QFN6_CHOCR2.690e-6174.44C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
R7QFN2_CHOCR7.850e-2845.64J domain-containing protein n=1 Tax=Chondrus crisp... [more]
A0A1X6PG20_PORUM4.160e-1431.62C2 domain-containing protein n=1 Tax=Porphyra umbi... [more]
M1UP50_CYAM11.450e-846.43Similar to heat shock protein dnaJ n=1 Tax=Cyanidi... [more]
A0A7S0ZDX1_9RHOD1.350e-742.27Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..163
NoneNo IPR availableCDDcd00030C2coord: 174..258
e-value: 2.12577E-9
score: 52.0691
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 167..281
e-value: 1.9E-10
score: 43.1
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 166..279
IPR000008C2 domainPFAMPF00168C2coord: 178..256
e-value: 1.5E-9
score: 38.0
IPR000008C2 domainPROSITEPS50004C2coord: 145..260
score: 9.079472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:608213..612274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6932.t1Gvermi6932.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 608213..612274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6932.t1 ID=Gvermi6932.t1|Name=Gvermi6932.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=299bp
MPADLNDSLGAIFSDLFSGVAGAVGPNGVVEDFVEFLERRVGGFGTGGDD
GLRDVLRSDDQHVLEAEVEDARFVLRQIRARRARVHDEQRALRRRAEDWA
ARAERADALRQYDVRDAARERQRQLLADAERFGKRAAKADALARDQEQRL
RSIEERLATLANMVNVEGKISVWIKSGSFSHASDLYIKVLIDDNDIWKTE
DKDGFSPDWDSTVVKHIKGDYEKIILKLMDEDTFSRDDVIATAEFSIADL
LDDGINDDAVPMRDADGNDVGTLAVNINFEEGDVNMFDLLGSMLHKDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom