Gvermi6884.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6884.t1
Unique NameGvermi6884.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A2V3IUC6_9FLOR (CMD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUC6_9FLOR)

HSP 1 Score: 318 bits (816), Expect = 3.800e-108
Identity = 155/220 (70.45%), Postives = 188/220 (85.45%), Query Frame = 0
Query:    1 MSGAYPLLAKLPAAPSSICTQFRTVLLAVAHVAAGDVHGVTSAFRYIHPQHHSKAYELAVVQAMPFIGIPRALHAAAALQVLGVVGHQQPAALPSVAHLEQKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHDDNWSSAEAVLQTWHRARYAL 220
            MS  YPLL+KLP APS+IC QFRT+LLAV HVA GDVHGVTSAF+++    H+K YELA+VQAMPF+GIPRALHAAA+L+V GVVGH   + + S+  L ++G+  FN IYGRNA RV++RL+QFHPFVEQW++TCNYGAMLSR+  +LRERELAAVAALS+DRCAAVQLASHIRGA  VGA+Y+E++MTVEHARVL  +D+WS+AEAVLQ + RARYAL
Sbjct:    1 MSKLYPLLSKLPKAPSTICPQFRTILLAVGHVARGDVHGVTSAFQHLDGSFHNKGYELAIVQAMPFVGIPRALHAAASLEVAGVVGHADESRMVSIGELRERGDSTFNEIYGRNALRVKRRLRQFHPFVEQWIMTCNYGAMLSREDASLRERELAAVAALSMDRCAAVQLASHIRGALKVGASYEEVRMTVEHARVLTSEDDWSTAEAVLQRYERARYAL 220          
BLAST of Gvermi6884.t1 vs. uniprot
Match: L1K121_GUITC (CMD domain-containing protein n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K121_GUITC)

HSP 1 Score: 97.1 bits (240), Expect = 1.450e-20
Identity = 68/231 (29.44%), Postives = 120/231 (51.95%), Query Frame = 0
Query:    5 YPLLAKLPAAPSSICTQFRTVLLAVAHVAAGDVHGVTSAFRYIHPQHHSKAYELAVVQAMPFIGIPRALHAAAALQVLGVVGHQQ--------------------PAALPSVAHLEQ--KGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDG-VTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHDDNWSSAEAVLQT 212
            +P L+++PAAP S+    R + L VA+  AG +  V   ++Y+    H    E A++Q    +G P+ ++A AA+Q +GV    +                        P  A  E+   G+ A ++IYG    ++R R+   HP ++++++   YG ++ R G + LR REL  V+ LS  +   +QLASH++GA NVGAT +E+   +E+++++  +  +  A  V +T
Sbjct:   62 HPWLSQMPAAPKSLLPHERVLTLVVANAGAGKLKDVARDWKYVPKSCHPAGME-AILQLNCLVGFPKTINAFAAVQKVGVERTPEWQEEHSNEGNYFAVRGDAACEGGSPGGAFAERGCTGDEACSMIYGEKYQKLRARMAYLHPLLDRFMVEHAYGRVIGRAGCLPLRMRELCVVSVLS-GQDVPMQLASHVQGALNVGATQEEVLAVLENSKLIWGEQTYKQAIEVAKT 290          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A2D5AVA9_9BACT (CMD domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AVA9_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 5.190e-17
Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = 0
Query:   49 PQHHSKAYELAVVQAMPFIGIPRALHAAAALQVLGVVGHQQPAALPSVAHLEQ--KGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHDDNWSSAEAVLQTWHR 215
            P    + +  A++Q   F G P  + A   LQ +G +G   P A   V   +   +G++ F+ IYG NA  V+K +   HP  E+W+L   YG +L+R G+    REL AVA LS       QLASH+RGA ++GA+ DE++ T+         D  + A AV++ + R
Sbjct:   34 PGEPDREWREALLQTHLFAGFPSVVEALRILQQVGGLG--PPTADEGVLEPDDFGRGQKLFDAIYGTNAGAVQKGIAAGHPLFERWILGHAYGRVLARGGMAPSLRELLAVACLSAQGLER-QLASHVRGALDLGASTDEVRATLACLAGRIEPDRLARARAVVERFGR 199          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A1F9LDV8_9DELT (CMD domain-containing protein n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F9LDV8_9DELT)

HSP 1 Score: 84.7 bits (208), Expect = 1.610e-16
Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 0
Query:   17 SICTQFRTVLLAVAHVAAGDVHGVTSAFRYIHPQHHSKAYELAVVQAMPFIGIPRALHAAAALQVLGVVGHQQPAALPSVAHLEQKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVE 192
            S+    R       + A GD+  V   +R +    H    E A++Q   F G PR ++A A ++ LGV    +   + S    E  GE     IYG    R+R R+   HP +++W++   YG +LSR G+TLREREL  +A L+    A  QL+SH+RGA   GAT  E    +E
Sbjct:   28 SLSDTVRMWTFLAGNTAKGDLQAVGHDWRCLAQDDHLGGIE-AILQTHLFAGYPRTINALATVRGLGVSPGVRVGEVDSSMWTEL-GEGNCRTIYGSAYDRLRDRIAGLHPDIDRWMVEIGYGRILSRPGLTLRERELCVIAVLAGQNVAP-QLSSHLRGAMRAGATPVECTAILE 200          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A7V9B9L3_9BACT (Carboxymuconolactone decarboxylase family protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7V9B9L3_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 5.370e-15
Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 0
Query:   60 VVQAMPFIGIPRALHAAAALQ-VLGVVGHQQPAALPSVAHLE--QKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAV---AALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHDDNWSSAEAVLQTWHRARYA 219
            ++Q++  +G PR L AA   +   GV      + +   AH E   +GE     +YG N  ++R+ + + HP ++ W+LT  YG  LSR G+ L+ RE   +   A L   R    QL SH+RGA N GAT+DE++  +  A  L   D+W+   AV   W + + A
Sbjct:   51 ILQSVLMVGYPRTLIAAGLWRKAAGVPAANGESDINYDAHAEWTARGEVTCREVYGDNYTKLRRNVAELHPALDAWMLTEGYGRTLSRPGLELKLREFCVIVQTAVLDTPR----QLHSHLRGALNAGATFDEVEAVLGIANPLVALDHWT---AVKDLWEQVQDA 209          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A2M7WJT3_9BACT (CMD domain-containing protein n=1 Tax=candidate division Zixibacteria bacterium CG_4_9_14_3_um_filter_46_8 TaxID=1975520 RepID=A0A2M7WJT3_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 1.240e-10
Identity = 49/158 (31.01%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   60 VVQAMPFIGIPRALHAAAALQVLGVVGHQQPAAL-----PSVAHLEQKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHDDNWSSAEAVLQT 212
            ++Q   F+G PR++     L+ L  +  +    L      S  + E  G +   +IYG+   R+ + +    P +  W++   YG +LSR G+T +EREL  VAAL V      QLASHIRGA N GA + EI   +    +    D+ + A ++ ++
Sbjct:   73 ILQCYLFLGFPRSIEG---LRHLAGIFKRYDIGLVLPRDDSPRNFEADGHKLCRIIYGQKYSRLMEVMSAISPELTLWMIQEGYGKVLSRPGLTAKERELVTVAAL-VPEGVPNQLASHIRGALNAGAVHAEIIDIINFVGIWVDSDSTAKAISLCES 226          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A3D3LUY6_9BACT (CMD domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3D3LUY6_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 3.950e-10
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 0
Query:   96 VAHLEQKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHDDNWSSAEAVLQT 212
            V +  +KG + F  IYG N  +V   ++     + +W+L   YG +LSR G+TL ERE+  V+ L  D    VQL SHI+G  N G T  EI   +E    +  + N   +  +L+T
Sbjct:   80 VINPREKGLKTFKKIYGNNYKKVILNIQNLSDELSEWMLLEGYGKVLSRQGLTLAEREIINVSVLCTDYYP-VQLFSHIKGCLNCGLTKKEIAKVIELTGGINTEGNIKKSLKILKT 195          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A1G0N5Q7_9BACT (CMD domain-containing protein n=1 Tax=Ignavibacteria bacterium GWA2_55_25 TaxID=1798422 RepID=A0A1G0N5Q7_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 7.900e-10
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 0
Query:   67 IGIPRALHAAAALQVLGVVGHQQPAALPSVAHLEQKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHDDNWSSAEAV 209
            +G+P  L    ++Q L   G ++P  + S     ++G+ A   IYG    ++ +RL   HP + + V T  YG +LSR G++LREREL  V  L + +  A QL SH+RGA  VG     ++  +   R LA      SA A+
Sbjct:   63 LGVPMMLEGLESVQSLSKQGRRKPKPI-SPKGAFRRGKAALKSIYGGQTEKLLQRLDNLHPGLARMVCTNAYGEILSRHGLSLRERELINVTVLFLQQFDA-QLYSHLRGAMRVGIAPSTLRTLI---RSLARSTRRPSAAAL 200          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A3C0ZNU5_9BACT (CMD domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3C0ZNU5_9BACT)

HSP 1 Score: 65.9 bits (159), Expect = 1.530e-9
Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 0
Query:   66 FIGIPRALHAAAALQVLGVVGHQQPAA----LPSVAHLEQKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLA 198
            F+G P  L     L+ L  + H +PAA    L    + +++G      IYG+   R+   L   HP +   ++   YG +LSR G+TL+EREL + A L +      QL SH+RGA  VGA  D ++ T+E A  +A
Sbjct:   71 FVGYPAMLDG---LEELSRI-HPKPAAAVGRLARRPNAKREGLTLLERIYGKQTERLLDHLHSLHPELVGMIVNDAYGRILSRSGLTLKERELISTAVLLIQGFRP-QLYSHLRGALRVGAHPDALRATIERACAIA 202          
BLAST of Gvermi6884.t1 vs. uniprot
Match: A0A0P1MR08_9BACT (4-carboxymuconolactone decarboxylase n=1 Tax=Candidatus Chrysopegis kryptomonas TaxID=1633643 RepID=A0A0P1MR08_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 9.840e-9
Identity = 42/136 (30.88%), Postives = 67/136 (49.26%), Query Frame = 0
Query:   57 ELAVVQAMPFIGIPRALHAAAALQVLGVVGHQQPAALPSVAHLEQKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLRERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVE 192
            E A++Q   F G P  +     L+          A+   V      G      +YG+N  ++ + +K  HP + +W++   YG +LSRD ++L+EREL  VA L+       QL SH++GA N GA + E+   +E
Sbjct:   41 EEAILQCYLFAGFPAVIEGFTVLRKF--TNGNSVASEYDVEKFYSNGIETCKKVYGKNFEKLVQNMKSLHPELFEWMIIEGYGKVLSRDILSLKERELLNVAILTSLGWKR-QLLSHLKGALNTGAEFKELSKLIE 173          
The following BLAST results are available for this feature:
BLAST of Gvermi6884.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUC6_9FLOR3.800e-10870.45CMD domain-containing protein n=1 Tax=Gracilariops... [more]
L1K121_GUITC1.450e-2029.44CMD domain-containing protein n=2 Tax=Guillardia t... [more]
A0A2D5AVA9_9BACT5.190e-1734.91CMD domain-containing protein n=1 Tax=Planctomycet... [more]
A0A1F9LDV8_9DELT1.610e-1634.66CMD domain-containing protein n=2 Tax=unclassified... [more]
A0A7V9B9L3_9BACT5.370e-1533.73Carboxymuconolactone decarboxylase family protein ... [more]
A0A2M7WJT3_9BACT1.240e-1031.01CMD domain-containing protein n=1 Tax=candidate di... [more]
A0A3D3LUY6_9BACT3.950e-1035.04CMD domain-containing protein n=1 Tax=Bacteroidete... [more]
A0A1G0N5Q7_9BACT7.900e-1034.27CMD domain-containing protein n=1 Tax=Ignavibacter... [more]
A0A3C0ZNU5_9BACT1.530e-935.04CMD domain-containing protein n=1 Tax=Bacteroidete... [more]
A0A0P1MR08_9BACT9.840e-930.884-carboxymuconolactone decarboxylase n=1 Tax=Candi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029032AhpD-likeGENE3D1.20.1290.10coord: 18..217
e-value: 1.4E-29
score: 105.3
IPR029032AhpD-likeSUPERFAMILY69118AhpD-likecoord: 101..209
IPR003779Carboxymuconolactone decarboxylase-likePFAMPF02627CMDcoord: 134..210
e-value: 1.7E-10
score: 40.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:354552..355214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6884.t1Gvermi6884.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 354552..355214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6884.t1 ID=Gvermi6884.t1|Name=Gvermi6884.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MSGAYPLLAKLPAAPSSICTQFRTVLLAVAHVAAGDVHGVTSAFRYIHPQ
HHSKAYELAVVQAMPFIGIPRALHAAAALQVLGVVGHQQPAALPSVAHLE
QKGERAFNLIYGRNAYRVRKRLKQFHPFVEQWVLTCNYGAMLSRDGVTLR
ERELAAVAALSVDRCAAVQLASHIRGAFNVGATYDEIKMTVEHARVLAHD
DNWSSAEAVLQTWHRARYAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029032AhpD-like
IPR003779CMD-like