Gvermi6882.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6882.t1
Unique NameGvermi6882.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length944
Homology
BLAST of Gvermi6882.t1 vs. uniprot
Match: A0A2V3IUF7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF7_9FLOR)

HSP 1 Score: 272 bits (696), Expect = 2.010e-74
Identity = 355/973 (36.49%), Postives = 485/973 (49.85%), Query Frame = 0
Query:    5 LPNSRPVPR-RAGLQHILDAMTRTPAQLLGEPPLPGLPPRRVPPSTISYEAALAITRSFAHPSAILQEDPLPRHLPPRKLPTRR----PEPDLPPLAAASTPPIP---FSVPKSALPPSRAKKPDARLTAPANRKLKPEP------PIHKSLKVTGKLPKKVPTAFRSVPPDQQQLSAPSNPDDVAKPALKSKEPRLRSSPAPLAEPT------EFNTGLRSSPAPFSDSKPGARR-KDRPPLRSSPAXXXXXPAPLPPASDXXXXXXXXXXXXXXXXXALGPHPRDSRDGVERPKLRSSPAEYFDSKGEXXXXXXXXXXXXXXXXXSKGEAGKPKSQRSTQRQGDAKVAAPKAAKRPPPSVPLSRPVARVPRSEPAPRRSVSPEPVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXKERRGQKNGSRRRDSSVER-----SDDDGTEMPRRRRG------SSPEPAPRSKPRDSGKRRKKAVDDGFSDGEQVVSRSAGKERGTDGDKDYERIADR--EKPRAKGKRKERKGARESRKRVEREGDVDAEVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKYRDEERVRDAEKPLSKNAEKSKDRGLKRDPEWGDDIEERERKTMRKEHARQVDAAKERSKDREDTAVPKAQRKTPVRGPISLRSEPVDKVLAKANRETKDGHRSDASPSEKEKQRTRENTPRKCMFRSVPANAILESAGAGGAKQSDIANGVSRGVKE--AASPASTQADMLPRPTPRSPSREELRLSARKLEQLASEQRELLSQFDSLSKLCDSFLLKEKHDDFEETTKKAFGVLFKYCLKKETEMRLRRRTNREWREIRKETLTKYKHLTRQFGTQRISELEKLGRSQAALFLSHQVHKVYVRMFILQRCWNKDLRNGENEMRSLMSHLHGEGAAVDKNKALTPRKVEHIASMLKDYSNIVCLLDILVSDWTDGDDEAGFEMVMPS 941
            +PNSRP+P  +  +  IL+ +TRTPA +LGEPPLP LPP     S++SY  A+AIT +F  P               RK P +R    P  D  P        +P    ++PKS LPP +      R +A A++K K EP      P++ + K T  L ++ PT  ++    +  L  P          L  K  ++RSSP P  +P       +  +  RSS    +D+  GAR+ K++P LRSSP       + +   S        XXXXXXXXXXA      ++  G+                  XXXXXXXXXXXX                 S   + D+K    K  K+PP SVP SRP  RVPRSEP P +S SPE   XXXXXXXXXXXXXXXXXXXXXXXXXXXX               S E      S        RRRRG      S  E +   K RD  ++R K +DD  SD     S++   ER TD D+DY+R++++  EK   KG+  +R           R  D + E  R                                 K   E+R R+A++    N+E+ +  G               RK      +   D      ++R+D+  P+  R    R       +  D+V  K NR+ K+GH SD+S  EK KQ+     P+   FRSV   A+  S   G  K  + +  VSR V+E  A+S A        +      + EE R SA  L++L +EQ++LLSQFDSL+KLCD +L K+KHDDFEET KKAF V FK CLKKET++R+ +RTN+EW  +RKE L +YK+LT+ FG  R+ EL +LGR++ A F+SHQVHK Y R+F+LQRCW+K+ R+ E+++R  ++ L  +G    ++  L  R    +   L+DY+ ++ LLD + SDW DGD  AGFEM +PS
Sbjct:    7 VPNSRPLPTSKPDIDKILNGLTRTPADILGEPPLPPLPPPSSSKSSLSYHDAVAITHAFPDPXXXXXXXXXXXXXXXRK-PKKRARAAPPTDTKPKRRKKEDKLPSLTVTIPKSVLPPKQNSNQSPRPSA-AHKKTKAEPAFVNDKPLNNAHKPT--LRQEAPTVTKT----ENVLKRPGKGKLSDSVPLVPKV-KVRSSPHPAQDPKNARKEKDTRSKPRSSLPNPTDAAKGARKIKEQPTLRSSPLQA----STVKDTSKDKLPKTKXXXXXXXXXXAKEARKENAVIGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------GPHSDSAKNDSK----KLPKKPPHSVPTSRPAPRVPRSEPVPSKSTSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSPEPRPERLSRXXXXXXXRRRRGDRDYARSQRESSVDGKRRDFERKRAKDIDDDLSDKVLRRSKNRDAERSTDSDRDYDRVSEQSSEKRPVKGRNIDR-----------RRRDSEVEYDRYTESGFGS-------------------------KKGGEKRKREADRVH--NSERDRKLG---------------RKXXXXXASSGSDTPGRSPQERDDSLSPRHPRLRSARPESDDNLK--DRVQPKGNRDAKNGHNSDSSVPEKTKQQF----PK---FRSV---AVTPS---GVPKVPESSGLVSRPVREPPASSSARPAGVKFGQEVSALMTSEERRKSADDLKRLLAEQKDLLSQFDSLTKLCDEYLSKKKHDDFEETVKKAFRVYFKLCLKKETQLRMLQRTNQEWAHVRKEVLGRYKYLTKNFGPMRVEELRQLGRTKTAQFISHQVHKGYFRIFMLQRCWDKEQRSFESDVRRTVNDLFRDGTLGRRD--LFGRSAWFVRQALEDYAKLLPLLDAITSDWGDGDHIAGFEMSIPS 878          
The following BLAST results are available for this feature:
BLAST of Gvermi6882.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUF7_9FLOR2.010e-7436.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 492..512
NoneNo IPR availableCOILSCoilCoilcoord: 735..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 644..677
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..682
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 704..738

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:347555..350386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6882.t1Gvermi6882.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 347555..350386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6882.t1 ID=Gvermi6882.t1|Name=Gvermi6882.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=944bp
MAVALPNSRPVPRRAGLQHILDAMTRTPAQLLGEPPLPGLPPRRVPPSTI
SYEAALAITRSFAHPSAILQEDPLPRHLPPRKLPTRRPEPDLPPLAAAST
PPIPFSVPKSALPPSRAKKPDARLTAPANRKLKPEPPIHKSLKVTGKLPK
KVPTAFRSVPPDQQQLSAPSNPDDVAKPALKSKEPRLRSSPAPLAEPTEF
NTGLRSSPAPFSDSKPGARRKDRPPLRSSPAPLRSSPAPLPPASDRKDAR
REGDRPARKASPALGPHPRDSRDGVERPKLRSSPAEYFDSKGEDRPKLRS
SPATRADPKGSKGEAGKPKSQRSTQRQGDAKVAAPKAAKRPPPSVPLSRP
VARVPRSEPAPRRSVSPEPVRKPESSKHSKGNRYSSAKRETAASRKSAGK
ERRGQKNGSRRRDSSVERSDDDGTEMPRRRRGSSPEPAPRSKPRDSGKRR
KKAVDDGFSDGEQVVSRSAGKERGTDGDKDYERIADREKPRAKGKRKERK
GARESRKRVEREGDVDAEVSRDKRQRRERGKVRVRDDEIEGEIRHDKGAA
RKNEKYRDEERVRDAEKPLSKNAEKSKDRGLKRDPEWGDDIEERERKTMR
KEHARQVDAAKERSKDREDTAVPKAQRKTPVRGPISLRSEPVDKVLAKAN
RETKDGHRSDASPSEKEKQRTRENTPRKCMFRSVPANAILESAGAGGAKQ
SDIANGVSRGVKEAASPASTQADMLPRPTPRSPSREELRLSARKLEQLAS
EQRELLSQFDSLSKLCDSFLLKEKHDDFEETTKKAFGVLFKYCLKKETEM
RLRRRTNREWREIRKETLTKYKHLTRQFGTQRISELEKLGRSQAALFLSH
QVHKVYVRMFILQRCWNKDLRNGENEMRSLMSHLHGEGAAVDKNKALTPR
KVEHIASMLKDYSNIVCLLDILVSDWTDGDDEAGFEMVMPSKV*
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