Gvermi6876.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6876.t1
Unique NameGvermi6876.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length544
Homology
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A2V3ILX6_9FLOR (T-complex protein 1 subunit gamma n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX6_9FLOR)

HSP 1 Score: 940 bits (2429), Expect = 0.000e+0
Identity = 485/544 (89.15%), Postives = 516/544 (94.85%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKENSS-YHAPEEDE 543
            MQAPVLVLNQNA+RETGRRAQLTNIAAA+AVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEIL ICE FLQRN+HPTVIVSALFKALDDAV FAEEMSV+VDVNDD QVLQLIRSCIGTKYVTRH+NLIVDIAFKAVKTVRV+VDGR IMDIKNFAKVEKI GGEL DS VLDGVMFNKDVTSAKM RRIE PRI+LLDCPLE+RKAESQTNVEI+ E +WKRLLEIEEEYV  LCKKLLEHKPDLVITEKGASDLALHIL RKGVSVIRRLRK+DNNR +KACGATVVSRIEELKKSD+GTGAGLFE++KIGDEYY+FITGCK+PKACT+LLRGGS+DVLMEVERNL+DAMAV RNIF+NSKMVPGGG+IEMAVA+RL  KSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRA H+ET++E+SKFWGIDGMKGV+ DMR LGVWEPL+VKTQTMKTAVEAAAMLLRIDDIVSGLSKKK N + Y A  +DE
Sbjct:    1 MQAPVLVLNQNARRETGRRAQLTNIAAAKAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILTICEAFLQRNIHPTVIVSALFKALDDAVVFAEEMSVAVDVNDDSQVLQLIRSCIGTKYVTRHDNLIVDIAFKAVKTVRVDVDGRPIMDIKNFAKVEKIPGGELIDSQVLDGVMFNKDVTSAKMRRRIENPRIMLLDCPLEFRKAESQTNVEITDETNWKRLLEIEEEYVAGLCKKLLEHKPDLVITEKGASDLALHILGRKGVSVIRRLRKTDNNRAAKACGATVVSRIEELKKSDVGTGAGLFEVRKIGDEYYTFITGCKEPKACTILLRGGSRDVLMEVERNLDDAMAVTRNIFVNSKMVPGGGSIEMAVAHRLHTKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRAKHSETESEESKFWGIDGMKGVSTDMRTLGVWEPLVVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKNNDAGYQASNDDE 544          
BLAST of Gvermi6876.t1 vs. uniprot
Match: R7Q4R4_CHOCR (T-complex protein 1 subunit gamma n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4R4_CHOCR)

HSP 1 Score: 871 bits (2250), Expect = 9.060e-316
Identity = 445/547 (81.35%), Postives = 495/547 (90.49%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHN---ETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKENSSYH--APEED 542
            MQAPVLVLNQNAKRE+GRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEIL +CE FL RN+HPTVIVSALF ALDDAV FAEE++++VD+ +DEQ+LQLIRSCIGTKYVTRH++LIV+IAFKAV  VRV++DG  ++DIKNFAKVEKI GGEL DS VL GVMFNKDVT+AKM RRIE PRI+LLDCPLEYRKAES TNVEI++E DWKRLLEIEEEYVM LC KLLE KPDL++TEKG SDLALH+L ++ VSVIRRLRK+DN R++KA GA +VSR+EELK+SD+G GAGLFE+ KIGDEY+SFIT CK+PKACT+LLRGGSKDVLMEVERNL+DAMAV RNI  N KMVPGGGAIEMAV+NRL AKSKTITGVSQYPYRAVAEALEVIPRTL ENCGG VIRV+TALRA H+   +T+N+D  FWGIDG+KGVA DMRE+G+WEPLIVKTQTMKTAVEAA MLLRIDDIVSGLSK+K+       APEE+
Sbjct:    1 MQAPVLVLNQNAKRESGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILTLCETFLNRNIHPTVIVSALFNALDDAVVFAEELAITVDLTNDEQILQLIRSCIGTKYVTRHDDLIVNIAFKAVNVVRVDIDGTVVIDIKNFAKVEKIPGGELSDSRVLSGVMFNKDVTNAKMRRRIENPRIILLDCPLEYRKAESTTNVEITEEKDWKRLLEIEEEYVMALCDKLLEFKPDLIVTEKGVSDLALHVLGKQNVSVIRRLRKTDNTRIAKASGAIIVSRVEELKESDVGVGAGLFEVSKIGDEYFSFITECKNPKACTILLRGGSKDVLMEVERNLQDAMAVTRNILTNPKMVPGGGAIEMAVSNRLHAKSKTITGVSQYPYRAVAEALEVIPRTLAENCGGKVIRVMTALRAKHSGAKDTENKDCSFWGIDGLKGVAADMREIGIWEPLIVKTQTMKTAVEAAGMLLRIDDIVSGLSKRKDAGGAQGGAPEEE 547          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A7S1TE70_9RHOD (T-complex protein 1 subunit gamma n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE70_9RHOD)

HSP 1 Score: 743 bits (1918), Expect = 2.910e-265
Identity = 374/529 (70.70%), Postives = 449/529 (84.88%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSK 529
            MQAPVLVLN NAKRE+GRRAQLTNIAAA+AVSDIIRTTLGPRAMLKMIL A G+I+LTNDGN+ILRE+DVSHP+AKSMIELS+TQDE+VGDGTTSV VLAGE+L + E FLQ+N+HPTVIVS  F+AL DAV  AE ++  VDV+  E+V ++I+SCIGTK+V R+ +L+V IA +AV+TV V  +GR  +D KN+A+VEK+ GGE+ DS VLDGVMFNKDV S  M RRIE PRIVLLDCPLEY+K ESQTNVE+S+E DW+RLLEIEEE V  +C +++  KPDLVITEKG SDLALH L +  +S IRRLRK+DNNR+++A GAT+VSR EELK+SD+GTGAGLFE+ KIGDEYYS+I  CK+PK+CT++LRGGSKDVL EVERNL+DAM VARN+ LN K+VPGGGA EMAVA+ L AK+K I GV+Q+PYRAVA+ALEVIPRTL ENCG +V+RV+T LRA H+     D+  WGIDG +GV +DMR+LGVW+PL VK QTMKT VEAAA+LLRIDDIVSG+SK
Sbjct:    1 MQAPVLVLNANAKRESGRRAQLTNIAAAKAVSDIIRTTLGPRAMLKMILSAGGSIMLTNDGNSILREVDVSHPSAKSMIELSKTQDEQVGDGTTSVVVLAGEMLTLAEDFLQKNIHPTVIVSGYFRALRDAVAAAESLATLVDVSASEEVEKVIKSCIGTKFVNRYKDLMVSIALQAVRTVSVETNGRLTIDFKNYARVEKVVGGEISDSRVLDGVMFNKDVVSGNMRRRIENPRIVLLDCPLEYKKGESQTNVELSKEEDWQRLLEIEEEEVKKMCDEIIALKPDLVITEKGISDLALHFLGKHNISAIRRLRKTDNNRIARATGATIVSRTEELKESDVGTGAGLFEVTKIGDEYYSYIVQCKNPKSCTIVLRGGSKDVLNEVERNLQDAMCVARNVLLNPKLVPGGGATEMAVASILNAKAKAIEGVAQWPYRAVAQALEVIPRTLAENCGASVVRVMTQLRAMHS---GGDNTTWGIDGNRGVPVDMRDLGVWDPLAVKVQTMKTGVEAAALLLRIDDIVSGISK 526          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A1X6PII4_PORUM (T-complex protein 1 subunit gamma n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PII4_PORUM)

HSP 1 Score: 741 bits (1913), Expect = 1.620e-264
Identity = 376/531 (70.81%), Postives = 449/531 (84.56%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKK 531
            MQAPV+VLN NAKRE+GRRAQLTNIAA +AVSDIIRTTLGPRAMLKMILDA G++ LTNDGNAILRE+DVSHPAAKS+IELSRTQDEEVGDGTT+V V+AGE+L++ E FL+ N+HPTV+V A F ALD+AV  AE+++V+++ +D E++  ++ SCIGTKY+ RH++++V IA  AVKTVR  VDGR ++D K + KVEK+ GGELEDS VLDGVM  KDVT+A M RRIE PR++L+DCPLEYRKAES TNVE++++ D++ LL  EE+YV  +   LL HKPDL+ITEKG SDLALH+LA+  VSVIRR+RK+DNNR+++A GAT+VSR  E+  +D+GTGAGLFE+ KIGD+Y++FITGC +P+ACTVLLRGGSKDVL EVERNL+DA+ VARNI L+ KMVPGGGAIEMAVA  L AKSKT+T VS  PYRAVA ALEV+PRTL ENCG  VIRVLTALRA H     ED+ FWGIDG  GV +DMR LGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSK K
Sbjct:    1 MQAPVVVLNTNAKRESGRRAQLTNIAAGKAVSDIIRTTLGPRAMLKMILDASGSLTLTNDGNAILREVDVSHPAAKSIIELSRTQDEEVGDGTTTVAVMAGELLSVAEPFLKANMHPTVVVRAYFAALDEAVQHAEKIAVALNADDTEKMGAIVASCIGTKYMHRHSDMLVRIALSAVKTVRDEVDGRIVIDTKTYVKVEKLPGGELEDSRVLDGVMLAKDVTAANMRRRIEKPRVLLVDCPLEYRKAESATNVELTKDSDFRALLAAEEDYVTRIVGDLLAHKPDLLITEKGVSDLALHLLAKANVSVIRRVRKTDNNRVARAVGATIVSRTSEIVDADVGTGAGLFEVTKIGDDYFTFITGCDNPRACTVLLRGGSKDVLNEVERNLQDALCVARNILLHPKMVPGGGAIEMAVAAHLTAKSKTLTDVSAAPYRAVASALEVVPRTLAENCGAKVIRVLTALRAKHAGGGGEDAVFWGIDGRSGVVVDMRTLGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKPK 531          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A7S0G3W3_9RHOD (T-complex protein 1 subunit gamma n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3W3_9RHOD)

HSP 1 Score: 705 bits (1819), Expect = 2.710e-250
Identity = 350/535 (65.42%), Postives = 449/535 (83.93%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKENSS 535
            MQAPVLVLN+  +R+TG RAQLTNIAAA+AVS+IIRTTLGPRAMLKMILDA G IVLTNDGNAILREIDV+HPAAKS+IELS+TQDEEVGDGTTSV+VLAGE+L++ E FL+RN+HPTV+V+  F+AL+DAV  AEE+S+ +DVN   ++ +++ SC+GTKYV+R+ +L+V IA +AV  V+V    R   D KN+AKVEKI GG+L++S VL GVMFNKDV S  M RRIE PRI+LLD P++Y+K ESQTN+E+++  D++RL+E+EEEYV  +C  +L+  PD+VITEKG SDLALH  ++K VS IRRLRK+DNNR+++ACGAT+VSR +ELK+SD+GTGAGLFE+ KIGDEY++++  CKD KAC+++LRGGSKDVL EVERNL+DAM VARN+ +   +V GGGAIEMA++  L  KSK+I GV Q PY+AVA+ALEVIPRTL+ENCG +V+RVLTALRA H    N ++  +G+DGMKG  +DMR LG++EPL VKTQT+KT+VEAAAMLLRIDD+VSG+++K++ +S
Sbjct:    1 MQAPVLVLNEQTQRDTGHRAQLTNIAAAKAVSEIIRTTLGPRAMLKMILDASGGIVLTNDGNAILREIDVNHPAAKSIIELSKTQDEEVGDGTTSVSVLAGELLSLSEQFLERNIHPTVVVNGFFRALNDAVAIAEELSMQIDVNKPGELDKVVASCVGTKYVSRYGDLMVKIAIEAVNMVKVEDGDRITADFKNYAKVEKIPGGDLKESKVLSGVMFNKDVVSGTMRRRIENPRIILLDTPVQYQKGESQTNIELTKGEDFQRLMELEEEYVQKICDDILKFNPDVVITEKGISDLALHFFSKKNVSCIRRLRKTDNNRVARACGATIVSRTDELKESDVGTGAGLFEVSKIGDEYFTYVVDCKDAKACSIVLRGGSKDVLNEVERNLQDAMCVARNVGIKPSLVCGGGAIEMAISRALMEKSKSIEGVVQQPYQAVAQALEVIPRTLVENCGASVVRVLTALRAKH---ANGENTTFGVDGMKGEVVDMRTLGLFEPLEVKTQTIKTSVEAAAMLLRIDDVVSGITRKQDPAS 532          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A5J4Z1Q8_PORPP (T-complex protein 1 subunit gamma n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1Q8_PORPP)

HSP 1 Score: 699 bits (1805), Expect = 3.640e-248
Identity = 364/540 (67.41%), Postives = 434/540 (80.37%), Query Frame = 0
Query:    3 APVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKENSSYHAPEED 542
            AP++VLN NAKRE GRRAQLTNIAAA+AV DIIRTTLGPRAMLKMILDA G++VLTNDGNAILREIDV HPAAKS+IELS+TQDE VGDGTTSV VLAGE+L + E FL+RN+HPTVIV A F+ALDDAV  AE  ++ +D ++ E+V ++I SC+GTK++ R   L+V +A +AVKTV V  + R  +D KN+AKVEKI GGE+ DS VLDGV+ NKDV    M R+IE PRI+LLD PLEYRK +SQTNVEI+ E DW RLL +EEE+V      LL+HKPDLVITEKG SDLALH+L + GV+ IRRLRK+DNNR+++A GA +V+R EELK+SD+G+ AGLFE++KIGDEY+++I  C  PKAC+++LRGGSKDVL E+ERNL DAM VARN+ LN K+VPGGGAIEM V+  L AK+KTI G SQ PY AV EALEVIPRTL ENCG NVIRVLT LRA H +  N     WGIDG KGV  DM  LGVWEPL VK QT+KTAVEAAAMLLRIDDIVSG+SKKKE+   +  ++D
Sbjct:    4 APIVVLNPNAKREQGRRAQLTNIAAAKAVGDIIRTTLGPRAMLKMILDAQGSVVLTNDGNAILREIDVQHPAAKSIIELSKTQDEGVGDGTTSVAVLAGELLALAEPFLERNIHPTVIVGAYFRALDDAVNAAESAALVIDQDNAEEVGKVIASCLGTKFMNRWAKLMVHLALQAVKTVMVKTNDRISIDFKNYAKVEKIPGGEISDSEVLDGVIINKDVCLGNMKRKIENPRIILLDSPLEYRKGDSQTNVEITSEADWGRLLRLEEEFVEKAVADLLKHKPDLVITEKGISDLALHLLQKAGVACIRRLRKTDNNRIARATGAVIVNRPEELKESDVGS-AGLFEVRKIGDEYFTYIVQCAAPKACSIVLRGGSKDVLNEIERNLMDAMCVARNVMLNPKLVPGGGAIEMTVSQVLAAKAKTIQGTSQAPYAAVGEALEVIPRTLAENCGANVIRVLTQLRAKHADGANTS---WGIDGNKGVVTDMVTLGVWEPLEVKVQTLKTAVEAAAMLLRIDDIVSGISKKKEHGGPNMDQDD 539          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A1Y3NM86_PIRSE (T-complex protein 1 subunit gamma n=6 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y3NM86_PIRSE)

HSP 1 Score: 689 bits (1778), Expect = 5.320e-244
Identity = 337/544 (61.95%), Postives = 437/544 (80.33%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKENSS-YHAPEEDE 543
            MQAPV+VLN NAKRE G++AQL+NI AA+ VSDIIRT LGPRAMLKMILD MG IVLTNDGNAILRE+DV+HPAAKSMIELSRTQDEEVGDGTTSV +LAGE +     FL+RN+HP  I+SA  KAL+DA+   ++++++VDVN+DE+++ LI+S IGTK+++   +++  +A  +V+TV   ++G++ +DIK +AKVEKI GGE+EDS VLDG+M NKDVT   M RRIE PRIVLLDCPLEY+K ESQTN E++ E  W RLLEIEEE V  LC  ++  KPDLV TEKG SDLA H L +  ++ IRR+RK+DNNR+++ACGAT+V+++++LK+SD+GTG GLFE++KIGDEY++F+T CKDPKACT++LRG SKD+L E+ERNL+DAMAVARN+    K+ PGGGA EMA++  L   S+ ITG+ Q+PY+A+A++ EVIPRTLI+NCGGN I+VLT LRA H + Q+     WGIDG KGV +DM+E G+W+P  VK QT+KTA+E++ MLLR+DD+VSG+SKK E     HA +E E
Sbjct:    1 MQAPVIVLNTNAKREQGKKAQLSNIQAAKIVSDIIRTCLGPRAMLKMILDPMGGIVLTNDGNAILREVDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGETIVSAVPFLERNIHPITIISAYKKALEDAITILDKIALNVDVNNDEEMIALIKSSIGTKFISAWGDMMCKLALDSVRTVSTEINGKREVDIKRYAKVEKIPGGEIEDSRVLDGIMVNKDVTHPNMRRRIENPRIVLLDCPLEYKKGESQTNAEVTDEKHWARLLEIEEEQVKQLCDSIIAVKPDLVFTEKGVSDLAQHYLMKANITAIRRVRKTDNNRIARACGATIVNQVDDLKESDVGTGCGLFEVQKIGDEYFTFLTKCKDPKACTIMLRGPSKDILNEIERNLQDAMAVARNVVFEPKLCPGGGATEMAISVGLAKNSQNITGIEQWPYKALADSFEVIPRTLIQNCGGNAIKVLTQLRAKHAQGQHT----WGIDGTKGVIVDMKEYGIWDPYAVKAQTIKTAIESSCMLLRVDDVVSGMSKKTEQEPPKHAADEPE 540          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A1Y1Y0M3_9FUNG (T-complex protein 1 subunit gamma n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y0M3_9FUNG)

HSP 1 Score: 682 bits (1760), Expect = 2.680e-241
Identity = 332/531 (62.52%), Postives = 434/531 (81.73%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKK 531
            MQ+PV+V+N N +RE+GR+AQ++NI AA+ V+D+IRT LGPR+MLKM+LD MG IVLTNDGNAILRE++V+HPAAKSMIELSRTQDEEVGDGTTSV +LAGE+L     +L+RN+HP VI+SAL KAL+DA+   +E+S  VD+ND++++L LI++ IGTK+V+R + L+  +A  AVK V  + +GR+ +DIK +A++EKI GGE+E+S VLDGVM NKDVT  KM RRIE PR++LLDCPLEY+K ESQTN+EI++E DW R+L+IEEE +  LC K++E KPDLVITEKG SDLA H L +  ++ +RR+RK+DNNR++KA GAT+V+R+++LK +D+GT  GLF ++KIGDEY+SF+T C+DPKACTVLLRG SKDVL E+ERNL+DAM VARN++ N  + PGGGA EMA++ +L  K+KT+ GV Q+PY AV+EA+EVIPRTL++NCGGN I+VLT LRA H    N D   WGIDG  G  +DM E GVWEP  VK QT+KTA+E+A +LLR+DDIVSG+SKK+
Sbjct:    1 MQSPVIVMNTNTQRESGRKAQISNITAAKTVADVIRTCLGPRSMLKMLLDPMGGIVLTNDGNAILREVEVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEVLATAAPYLERNIHPIVIISALKKALEDAIKIVDEISHPVDINDNKEMLDLIKASIGTKFVSRWSELMCKLALDAVKCVATDDNGRREVDIKRYARIEKIPGGEIEESRVLDGVMVNKDVTHPKMRRRIENPRVILLDCPLEYKKGESQTNIEITKEEDWNRILQIEEEQIKALCDKIIELKPDLVITEKGVSDLAQHYLLKANITALRRVRKTDNNRIAKATGATIVNRVDDLKDADVGTQCGLFSVEKIGDEYFSFMTQCEDPKACTVLLRGPSKDVLNEIERNLQDAMCVARNVYFNPNLAPGGGATEMAISVKLAQKAKTLEGVEQWPYMAVSEAMEVIPRTLVQNCGGNAIKVLTQLRAKH---ANGDHS-WGIDGHAGKIVDMLEYGVWEPNAVKVQTIKTAIESACLLLRVDDIVSGVSKKQ 527          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A4D5R9L5_SCOVI (T-complex protein 1 subunit gamma n=2 Tax=Scolopendridae TaxID=41363 RepID=A0A4D5R9L5_SCOVI)

HSP 1 Score: 681 bits (1758), Expect = 6.470e-241
Identity = 340/530 (64.15%), Postives = 429/530 (80.94%), Query Frame = 0
Query:    2 QAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEE-MSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKK 530
            QAP+LVL+Q+ KRETGR+ Q  N+ AA+ ++D+IRT LGPRAMLKM++D MG IV+TNDGNAILREI V HPAAKSMIE+SRTQDEEVGDGTTSV +LAGEIL++ E FLQ+ +HPTVI+SA  +AL+D +   ++ +S+ V+VND EQ+L++++SCIGTK++++ +++   IA  +V TV V  +GR+ +DIK +AKVEKI GG +E+SCVL GVM NKDVT  KM RRIE PRIVLLDC LEY+K ESQTN+EI +E D+ ++L+IEEE V  LC+ ++  KPD+V TEKG SDLA H L +  ++ IRR+RK+DNNR+++ACGA VV+R +EL+  D+GTGAGLFEIKKIGDEYY FIT CK+PKACT+LLRG SKD+L EVERNL+DAM VARNI +  K+VPGGGA+EMAVA+ +  KSKTITG+ Q+PY+A+A ALEVIPRTLI+NCGG+ IR LTALRA H  TQ   S  WGI+G  G  +DM+ELG+WEPL VK QT KTAVE A +LLRIDDIVSG  KK
Sbjct:    5 QAPILVLSQSTKRETGRKVQADNVNAAKTIADVIRTCLGPRAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEILSVAEPFLQQQIHPTVIISAYRQALEDIITILQDQISIPVNVNDPEQMLKIVKSCIGTKFISKWSDMACKIALDSVSTVFVEENGRKEIDIKRYAKVEKIPGGMIEESCVLKGVMLNKDVTHPKMRRRIENPRIVLLDCSLEYKKGESQTNMEIMKEEDFTKILQIEEEQVQKLCEDVIRVKPDVVFTEKGISDLAQHYLVKANITAIRRVRKTDNNRIARACGAVVVNRTDELRDDDVGTGAGLFEIKKIGDEYYCFITECKEPKACTILLRGASKDILNEVERNLQDAMQVARNIMIEPKLVPGGGAVEMAVAHIVTEKSKTITGIHQWPYKAIAHALEVIPRTLIQNCGGSTIRTLTALRAKH-ATQGNSS--WGINGETGEIVDMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKKK 531          
BLAST of Gvermi6876.t1 vs. uniprot
Match: A0A433PQK4_9FUNG (T-complex protein 1 subunit gamma (Fragment) n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQK4_9FUNG)

HSP 1 Score: 684 bits (1766), Expect = 1.510e-240
Identity = 332/543 (61.14%), Postives = 438/543 (80.66%), Query Frame = 0
Query:    1 MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILDAMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLAGEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQVLQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVEKIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAESQTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALHILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEIKKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIFLNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLIENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPLIVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKENSSYHAPEEDE 543
            MQAPV+V+N N +RETGR+AQL+NI AA+ ++DIIRT LGPR+MLKM+LD MG I+LTNDGNAILRE++V+HPAAKSMIELSRTQDEEVGDGTTSV VLAGE+L     +L+RN+HP VI+SA  KALDDAV   +++S+ VDVN+ E++LQLI+S +GTK+V R ++L+  +A  AV+TV      R+ +DIK +A+VEKI GGE+E+S VLDG+M NKDVT  KM RRIE PRIVLLDCPLEY+K ESQTN+EI++E DW R+L+IEEE +  +C++++  KPDLV TEKG SDLA H   +  ++ IRR+RK+DNNR+++A GAT+V+R+E+LK+SD+GT  GLF+I+KIGDEY+++++ CKDPKACT++LRG SKD++ EVERNL+DAM VARN+F N ++ PGGGA EMAV+  L  ++K + GV Q+PY+AVAEA+EVIPRTL++NCGGN I+VLT LRA H   ++     WGIDG  G  +DM++ G+WEP  VK QT+KTA+E+A +LLR+DDIVSG+S+KK+     AP E E
Sbjct:   58 MQAPVIVMNTNMERETGRKAQLSNIMAAKTIADIIRTCLGPRSMLKMLLDPMGGILLTNDGNAILREVEVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEVLAQALPYLERNIHPIVIISAFKKALDDAVKIVDDISIPVDVNNQEEMLQLIKSALGTKFVARWSDLMCKLALDAVRTVATEEGDRREVDIKRYARVEKIPGGEIEESRVLDGIMLNKDVTHPKMRRRIEQPRIVLLDCPLEYKKGESQTNIEITKETDWNRILQIEEEQIKLMCEQIIAVKPDLVFTEKGVSDLAQHYFMKANITAIRRVRKTDNNRIARATGATIVNRVEDLKESDVGTRCGLFKIEKIGDEYFTYLSDCKDPKACTIILRGPSKDIINEVERNLQDAMCVARNVFFNPRLAPGGGATEMAVSVGLDERAKLLEGVEQWPYKAVAEAMEVIPRTLVQNCGGNAIKVLTQLRAKHANGEHS----WGIDGHAGTIVDMKDYGIWEPNAVKVQTIKTAIESACLLLRVDDIVSGVSRKKDTGGQQAPAEGE 596          
The following BLAST results are available for this feature:
BLAST of Gvermi6876.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILX6_9FLOR0.000e+089.15T-complex protein 1 subunit gamma n=1 Tax=Gracilar... [more]
R7Q4R4_CHOCR9.060e-31681.35T-complex protein 1 subunit gamma n=1 Tax=Chondrus... [more]
A0A7S1TE70_9RHOD2.910e-26570.70T-complex protein 1 subunit gamma n=1 Tax=Compsopo... [more]
A0A1X6PII4_PORUM1.620e-26470.81T-complex protein 1 subunit gamma n=1 Tax=Porphyra... [more]
A0A7S0G3W3_9RHOD2.710e-25065.42T-complex protein 1 subunit gamma n=1 Tax=Rhodosor... [more]
A0A5J4Z1Q8_PORPP3.640e-24867.41T-complex protein 1 subunit gamma n=1 Tax=Porphyri... [more]
A0A1Y3NM86_PIRSE5.320e-24461.95T-complex protein 1 subunit gamma n=6 Tax=Neocalli... [more]
A0A1Y1Y0M3_9FUNG2.680e-24162.52T-complex protein 1 subunit gamma n=2 Tax=Basidiob... [more]
A0A4D5R9L5_SCOVI6.470e-24164.15T-complex protein 1 subunit gamma n=2 Tax=Scolopen... [more]
A0A433PQK4_9FUNG1.510e-24061.14T-complex protein 1 subunit gamma (Fragment) n=1 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 33..49
score: 36.81
coord: 371..393
score: 29.54
coord: 55..73
score: 38.97
coord: 85..104
score: 55.57
coord: 405..417
score: 44.28
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PANTHERPTHR11353CHAPERONINcoord: 2..531
IPR012719T-complex protein 1, gamma subunitTIGRFAMTIGR02344TIGR02344coord: 4..530
e-value: 1.7E-260
score: 863.0
IPR012719T-complex protein 1, gamma subunitCDDcd03337TCP1_gammacoord: 4..526
e-value: 0.0
score: 829.631
IPR027410TCP-1-like chaperonin intermediate domain superfamilyGENE3D3.30.260.10coord: 141..403
e-value: 5.2E-168
score: 561.9
IPR027410TCP-1-like chaperonin intermediate domain superfamilySUPERFAMILY54849GroEL-intermediate domain likecoord: 142..402
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 31..525
e-value: 5.9E-160
score: 533.1
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 28..524
e-value: 5.2E-168
score: 561.9
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 13..525
IPR027409GroEL-like apical domain superfamilyGENE3D3.50.7.10GroELcoord: 214..367
e-value: 5.2E-168
score: 561.9
IPR027409GroEL-like apical domain superfamilySUPERFAMILY52029GroEL apical domain-likecoord: 209..376
NoneNo IPR availablePANTHERPTHR11353:SF24T-COMPLEX PROTEIN 1 SUBUNIT GAMMAcoord: 2..531
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 85..93
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 57..73
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 36..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:331577..333308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6876.t1Gvermi6876.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 331577..333308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6876.t1 ID=Gvermi6876.t1|Name=Gvermi6876.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=544bp
MQAPVLVLNQNAKRETGRRAQLTNIAAARAVSDIIRTTLGPRAMLKMILD
AMGNIVLTNDGNAILREIDVSHPAAKSMIELSRTQDEEVGDGTTSVTVLA
GEILNICEMFLQRNLHPTVIVSALFKALDDAVGFAEEMSVSVDVNDDEQV
LQLIRSCIGTKYVTRHNNLIVDIAFKAVKTVRVNVDGRQIMDIKNFAKVE
KIAGGELEDSCVLDGVMFNKDVTSAKMPRRIETPRIVLLDCPLEYRKAES
QTNVEISQEHDWKRLLEIEEEYVMNLCKKLLEHKPDLVITEKGASDLALH
ILARKGVSVIRRLRKSDNNRLSKACGATVVSRIEELKKSDIGTGAGLFEI
KKIGDEYYSFITGCKDPKACTVLLRGGSKDVLMEVERNLEDAMAVARNIF
LNSKMVPGGGAIEMAVANRLQAKSKTITGVSQYPYRAVAEALEVIPRTLI
ENCGGNVIRVLTALRATHNETQNEDSKFWGIDGMKGVAIDMRELGVWEPL
IVKTQTMKTAVEAAAMLLRIDDIVSGLSKKKENSSYHAPEEDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR012719Chap_CCT_gamma
IPR027410TCP-1-like_intermed_sf
IPR002423Cpn60/GroEL/TCP-1
IPR027413GROEL-like_equatorial_sf
IPR027409GroEL-like_apical_dom_sf
IPR002194Chaperonin_TCP-1_CS