Gvermi6872.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6872.t1
Unique NameGvermi6872.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length304
Homology
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A2V3IVG1_9FLOR (Endoglucanase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVG1_9FLOR)

HSP 1 Score: 479 bits (1232), Expect = 9.420e-169
Identity = 225/299 (75.25%), Postives = 255/299 (85.28%), Query Frame = 0
Query:    1 MIQNPLAGQELDVTEQQVDRWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRLI 299
            M  +PLAG+ELDVTE QVDRWI+ ++ D RA +FRDHL N+PVFQWVGDW+P+I+R+VS IV+HAKAN A+FQIV+YNIPNRDAGGFSAGGA+S+ +YMQWIR VASAIG A+GILCIEPDALAH   F   K+EQR+Q+LREV+    R C++AYIYLDVGHP WLS   ATELF  AGGRFAHG+SLNVSNSQTTEDCF YG+ IVE VS SHGMIIDTSRNGAGPPP TL GTEAWANVPTNRLG  PTLRV  PN F+ RLHGLLWIKVPGESDG+YRGAP AG+FWPEGA+ LI
Sbjct:    1 MSHSPLAGKELDVTEHQVDRWIQSNKEDWRAKIFRDHLGNKPVFQWVGDWIPNIKRYVSGIVSHAKANDAIFQIVLYNIPNRDAGGFSAGGASSREKYMQWIRAVASAIGYAEGILCIEPDALAHGAEFIPWKREQRMQLLREVITYLRRACKHAYIYLDVGHPNWLSHGRATELFLTAGGRFAHGISLNVSNSQTTEDCFKYGLKIVETVSESHGMIIDTSRNGAGPPPSTLQGTEAWANVPTNRLGTVPTLRVRMPNSFSYRLHGLLWIKVPGESDGDYRGAPRAGEFWPEGAMILI 299          
BLAST of Gvermi6872.t1 vs. uniprot
Match: R7QHK0_CHOCR (Glycoside hydrolase Endo-1,4-beta-glucanase of family GH6 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHK0_CHOCR)

HSP 1 Score: 384 bits (985), Expect = 3.580e-131
Identity = 176/298 (59.06%), Postives = 222/298 (74.50%), Query Frame = 0
Query:    4 NPLAGQELDVTEQQVDRWIRYHR-NDP-RADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRLI 299
            NPL+G+ LDV E QVDRWI+ +R  DP +A+ F  H+AN+   QWVGDW    +   +RI NHA AN AL+QIV+YN PNRD GGFSAGGA S++ Y+ W+  +A+ +GS  GI+ +EPDA+AHA       K QR+ +LRE V++  +RC++AYIYLD GH  WL A  A  L   AG RFA+G+SLNVSNSQ T++C++YG  IVE +S  HG++IDTSRNGAGPPP   TG  A+AN P+NRLGM PTLRV PPN+F+NRLH LLW+KVPGESDG+Y GAP AG FWPEGA+RL+
Sbjct:    4 NPLSGKYLDVMETQVDRWIKDNRWTDPQKAEKFHKHIANKATCQWVGDWNTRPKEEAARIANHAHANNALYQIVLYNFPNRDTGGFSAGGAGSRQAYIAWVSAIAAGLGSRSGIIIVEPDAIAHAPELDENSKNQRLSLLRETVVLLRKRCKHAYIYLDAGHSDWLDAGTALGLLLTAGVRFANGISLNVSNSQWTKECYNYGKRIVEGISEEHGIVIDTSRNGAGPPPPEQTGFNAFANPPSNRLGMAPTLRVPPPNIFSNRLHALLWVKVPGESDGDYNGAPRAGMFWPEGAMRLV 301          
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A1W9QJD9_9DELT (Glucanase n=1 Tax=Sorangiineae bacterium NIC37A_2 TaxID=1970199 RepID=A0A1W9QJD9_9DELT)

HSP 1 Score: 214 bits (544), Expect = 9.270e-64
Identity = 123/296 (41.55%), Postives = 162/296 (54.73%), Query Frame = 0
Query:    4 NPLAGQELDVTEQQVDRWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHS-FSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRL 298
            NPLAG  L V    +   +R    DP      + +A QP   W+G W  +I R V   V  AKA  A+  ++ YNIP RD G +S GG  +  EY +WI  VA+ IG  K ++ +EPDAL H     + ++K++R++ L   V    R+  N  +YLDVGH  WLS   A E   +AG  +A+G SLNVSN  +TE+   YG +I ER+   H  +IDTSRNGAGP     T  EAW N P  ++G  PT     P        G LW+K PGESDG  +G P AGQ++ E AL L
Sbjct:   69 NPLAGATLFVDPDSL-AMLRAKHADPATAAILNRIAQQPQALWMGGWNSNIFRAVEHFVARAKAAGAVPVMIAYNIPLRDCGQYSQGGLKTLEEYKRWISDVAAGIGDDKAVVILEPDALGHFQECLTDQQKKERLEALNFGVRAL-RKNPNTAVYLDVGHARWLSVDEAVERLKEAGVEYANGFSLNVSNYVSTEENMAYGKAISERIGGKH-FVIDTSRNGAGPYEEAKTPEEAWCNPPGRKIGQAPTTDTGEP-----LCDGFLWLKRPGESDGQCQGGPPAGQWFEERALEL 356          
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A7X7JNZ2_9DELT (Glucanase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7JNZ2_9DELT)

HSP 1 Score: 206 bits (523), Expect = 1.550e-60
Identity = 115/296 (38.85%), Postives = 157/296 (53.04%), Query Frame = 0
Query:    4 NPLAGQELDVTEQQVD--RWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHS-FSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGAL 296
            NPL G +L V  + +   +  +  R DP      D +A QP   W+G+W  +I R V   V  AKA+ A+  ++ YNIP+RD G +S GG +SK  Y +WIR +A+ IGS   ++ +EPDAL H     S  +K +R+ +L + V +  +    A +Y+D GH  W+      E    AG   AHG +LN SN  +TE+   YG  + E V  +   +IDTSRNGAGP     T  E W N P  ++G  PT     P +      G LW+K PGESDG   G P AG FW E AL
Sbjct:   73 NPLRGAKLFVDPESLAMLQANKIRRTDPAKAAILDRIAQQPQALWMGEWNSNIFRAVEHFVARAKADGAVPVMIAYNIPHRDCGQYSQGGMSSKEAYQRWIRNIAAGIGSDAAVVVLEPDALGHFQECLSEEQKAERMFLLNDAVRVLRQNPATA-VYIDAGHARWVPVEEMAERLKAAGVEHAHGFALNTSNYVSTEENTEYGHKLSEAVGGAR-FVIDTSRNGAGPYEEAKTEEEKWCNPPGRKIGKPPTTETGDPLI-----DGYLWLKRPGESDGECNGGPKAGVFWLEMAL 361          
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A0G3BR04_9BURK (Glucanase n=1 Tax=[Polyangium] brachysporum TaxID=413882 RepID=A0A0G3BR04_9BURK)

HSP 1 Score: 206 bits (524), Expect = 2.730e-58
Identity = 122/302 (40.40%), Postives = 165/302 (54.64%), Query Frame = 0
Query:    2 IQNPLAGQELDVTEQ-----QVDRWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRL 298
            I  PL G+ L V  +     Q D W R  R    A +  D +A QPV  W+G W  D++   +R +  A     +  +V+YNIP RDAGG+S+GG A K  Y+ W+R VA+ +G+   ++ +EPDALA     +  ++  R+++LRE VLI  R+     +YLD G+P+W +A          G   A+G +LNVSN   T +   YG SI + V   H  +IDTSRNG GP P        WAN P   LG +PTL V  P V      G L+IKVPG+SDG   G P AGQ++PE AL L
Sbjct:  321 ISKPLYGKPLYVNPENKAKVQADAW-RTTRPADAAQM--DKMAAQPVALWIGGWFADVQGEANRYIEAATRAGRVGTVVLYNIPLRDAGGYSSGGEADKAAYLNWVRAVAAGLGNRPAVVVVEPDALAQLDQLTAAQQADRLEMLREAVLIL-RQHPQLQVYLDAGNPSWKTAEVMAARLRQGGIDKANGFALNVSNFHWTAENVRYGESISKLVDGKH-FVIDTSRNGNGPAPNN-----EWANPPGRALGERPTLSVAHPLV-----DGYLYIKVPGDSDGPANGGPEAGQWFPEYALEL 607          
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A832BF04_9BACT (Glucanase n=1 Tax=Candidatus Doudnabacteria bacterium TaxID=2052150 RepID=A0A832BF04_9BACT)

HSP 1 Score: 197 bits (500), Expect = 1.630e-57
Identity = 116/303 (38.28%), Postives = 156/303 (51.49%), Query Frame = 0
Query:    4 NPLAGQELDVTE-----QQVDRWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRLIGR 301
            NP +G +L V       QQ   W     + P+     D +A QP   W+G W  D+R  V+ +V+ A+    +  ++ YNIPNRD GG+SAGGA +   Y QWI + A+ IGS K  + +EPDAL   +  S  + + R  +L+  V  F    + A +YLD GH  WLSA        +AG   A+G SLN+SN  +T D   YG  +  ++   H  +IDTSRNG GP P        W N P   LG +PT      N  ++ +   LW K PGESDG   G P AG +WPE AL L  R
Sbjct:   40 NPFSGMKLYVNPDSNAAQQAAAW---RSSRPQDAQMMDKIATQPNAVWIGSWNSDVRSDVNNLVSAAQRQGTMPVMIAYNIPNRDCGGYSAGGAQTADAYRQWIDLFAAGIGSRKAAIILEPDALTLTNCLSSSELQARYDMLKYAVAKFKSLGQTA-VYLDAGHAKWLSADEVAGKLLNAGVSQANGFSLNISNFVSTADNEAYGRQVSAKIGGKH-FVIDTSRNGLGPAPDM-----QWCNPPGRALGERPT-----SNTGDSLVDAFLWGKQPGESDGQCNGGPAAGVWWPEYALGLAQR 327          
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A2W4NIX2_9PROT (Glucanase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4NIX2_9PROT)

HSP 1 Score: 195 bits (495), Expect = 2.210e-56
Identity = 115/298 (38.59%), Postives = 150/298 (50.34%), Query Frame = 0
Query:    4 NPLAGQELDVTEQQVD--RWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHS-FSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRL 298
            NPLAG +L V  + +   R       +P      D +A QP   W+G+W  +I R V  +V  AKA  A+   + YN+P+RD G  SAGG  SK  Y QWIR + + IG    ++ +EPDAL       +  ++E+R+ +LR+ V +  R+     +YLD GH  W       E    AG   AHG +LN SN   TE+   YG  I E V      +IDTSRNGAGP P        W N P  ++G  PT     P V     H  LW+K PGESDG   G P AG FW E AL +
Sbjct:   76 NPLAGAKLWVDPESLAALRANAIRAQEPDKAAILDKIAKQPQALWLGEWNSNIYRTVQHVVGKAKAEGAMPVFIAYNLPHRDCGQHSAGGLNSKDAYRQWIRKIHAGIGQDAAVVVLEPDALGLLDKCLTPEQQEERLFLLRDAVRVL-RQNPKTVVYLDAGHSRWAPVEVMAERLKKAGIEEAHGFALNTSNYGFTEENIEYGKKISELVG-GAPFVIDTSRNGAGPAP-----DNEWCNPPGRKIGTPPTTETGDPLV-----HAFLWLKRPGESDGECGGGPRAGVFWQERALEM 361          
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A1E7WZR5_9BURK (Glucanase n=1 Tax=Duganella phyllosphaerae TaxID=762836 RepID=A0A1E7WZR5_9BURK)

HSP 1 Score: 190 bits (483), Expect = 3.530e-55
Identity = 113/282 (40.07%), Postives = 147/282 (52.13%), Query Frame = 0
Query:   21 WIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERV---SLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRLI 299
            W R + +D R    R+ +ANQP  +W GDW   I   V   V  A AN     +V YNIP RD G FSAGGA S + Y  WIR  A+AIG+ + I+ +EPDAL          K  R+++ R  V  FT     AY+YLD+G+ AWL+   A     DAG   A G SLNVSN +T  +   YGV++   +    L    ++DTSRNG GP      GT+ W +    +LG+ P +     N   +     LWIK PGESDG    A  AG F PE A ++I
Sbjct:   43 WARNNPSDGRVTDIRNRIANQPGARWFGDWSGGIGAAVGNFVGAAAANGRTPVLVAYNIPARDCGQFSAGGAGSLQAYRDWIRAFAAAIGNRQAIVVLEPDALPQLDCLDAAGKSARLELFRYAVAQFTALAPGAYLYLDIGNSAWLAPTVAAARLVDAGVAGARGFSLNVSNYRTDAESNPYGVAVANALRQRGLQKNFVVDTSRNGNGP-----NGTQ-WCDPAGRKLGVTPRM-----NAAGSAPEMALWIKSPGESDGC---AAAAGTFSPELAYKMI 310          
BLAST of Gvermi6872.t1 vs. uniprot
Match: UPI001C3C8ABA (glycoside hydrolase family 6 protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3C8ABA)

HSP 1 Score: 190 bits (482), Expect = 2.280e-54
Identity = 119/301 (39.53%), Postives = 155/301 (51.50%), Query Frame = 0
Query:    4 NPLAGQELDVTEQ------QVDRWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRL 298
            NPL+G      EQ      Q   W      D  A+L R H+A QP   W+GDWV D+R  V+R V  A+    +  +V+YN+P RD G  S+GGAAS   Y +W+  VAS IG A   + +EPDAL+         + +R+++L   V   +R+   A +YLD G+P W  A         AG   A G ++NVS  +TTE    YG +I  R   +H  +IDTSRNG GP P    G E W N P   LG  PT     P +        LW+K PGESDG   G P AG++WPE AL L
Sbjct:   78 NPLSGGSPLYVEQAGNAAAQAAEWRAMRPQD--AELMR-HIAEQPQGFWIGDWVRDVRASVARRVAAARRAGTVPVLVLYNVPARDCGLHSSGGAASAAAYRRWVDRVASGIGRAPATVIVEPDALSALDCMGRAARAERVRLLAWAVQRLSRQPAAA-VYLDAGNPGWKPAGVVARRLRSAGVARARGFAVNVSGFETTERARAYGRAISRRTGRAH-FVIDTSRNGNGPAP----GGE-WCNPPGRALGPDPTTDTGDPLI-----DAFLWVKRPGESDGVCNGGPPAGRWWPEYALAL 363          
BLAST of Gvermi6872.t1 vs. uniprot
Match: A0A0Q8PQ71_9ACTN (Glucanase n=1 Tax=Kitasatospora sp. Root187 TaxID=1736486 RepID=A0A0Q8PQ71_9ACTN)

HSP 1 Score: 186 bits (471), Expect = 2.960e-53
Identity = 112/289 (38.75%), Postives = 147/289 (50.87%), Query Frame = 0
Query:   18 VDRWIRYHRNDPRADLFRDHLANQPVFQWVGDWVPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDA-GGFSAGGAASKREYMQWIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTRRCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDCFHYGVSIVERVSLSHGM----IIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQPTLRVNPPNVFNNRLHGLLWIKVPGESDGNY-RGAPH-AGQFWPEGALRLI 299
              +W+  HR D RA   +  +AN P+ +W G+W   I          A A   L  +V YNIPNRD   G S GGA S  EY  WI   AS IG+   ++ +EPDAL H    +  +  +R  +LR  V  F  +  N ++YLD+G+P WL+A+ A +L  DAG   AHG SLNVSN  TT     YG ++   +  S+G+    ++DTSRNG G           W N P  R       R+  P         LLW+K PGESDGN   GA   AGQF PE A ++I
Sbjct:   48 AQQWVNGHRGDGRAAAIQTSIANVPMARWFGNWSGTIGTATGAYAGAAAAGGKLPILVAYNIPNRDVCAGQSGGGAGSAAEYNSWIAAFASGIGNRPALVVLEPDALGHESCMTPAQVSERNGLLRNAVAQFNAKAPNTWVYLDIGNPGWLNASTAAKLLSDAGVSGAHGFSLNVSNFYTTGQNTTYGNNVNAALKSSYGLSKPYVVDTSRNGNGSDGN-------WCN-PAGR-------RIGTPTQKGGGAEMLLWVKAPGESDGNCGTGAGSTAGQFLPEVAYKMI 321          
The following BLAST results are available for this feature:
BLAST of Gvermi6872.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVG1_9FLOR9.420e-16975.25Endoglucanase 1 n=1 Tax=Gracilariopsis chorda TaxI... [more]
R7QHK0_CHOCR3.580e-13159.06Glycoside hydrolase Endo-1,4-beta-glucanase of fam... [more]
A0A1W9QJD9_9DELT9.270e-6441.55Glucanase n=1 Tax=Sorangiineae bacterium NIC37A_2 ... [more]
A0A7X7JNZ2_9DELT1.550e-6038.85Glucanase n=1 Tax=Myxococcales bacterium TaxID=202... [more]
A0A0G3BR04_9BURK2.730e-5840.40Glucanase n=1 Tax=[Polyangium] brachysporum TaxID=... [more]
A0A832BF04_9BACT1.630e-5738.28Glucanase n=1 Tax=Candidatus Doudnabacteria bacter... [more]
A0A2W4NIX2_9PROT2.210e-5638.59Glucanase n=1 Tax=Proteobacteria bacterium TaxID=1... [more]
A0A1E7WZR5_9BURK3.530e-5540.07Glucanase n=1 Tax=Duganella phyllosphaerae TaxID=7... [more]
UPI001C3C8ABA2.280e-5439.53glycoside hydrolase family 6 protein n=1 Tax=Milto... [more]
A0A0Q8PQ71_9ACTN2.960e-5338.75Glucanase n=1 Tax=Kitasatospora sp. Root187 TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0162881, 4-beta cellobiohydrolasePRINTSPR00733GLHYDRLASE6coord: 184..194
score: 48.99
coord: 154..167
score: 51.59
coord: 265..279
score: 57.41
coord: 98..113
score: 23.61
coord: 28..47
score: 26.39
coord: 215..228
score: 53.57
coord: 70..83
score: 48.41
IPR0162881, 4-beta cellobiohydrolasePIRSFPIRSF001100Cellulasecoord: 2..301
e-value: 1.0E-63
score: 214.3
IPR0162881, 4-beta cellobiohydrolasePFAMPF01341Glyco_hydro_6coord: 30..283
e-value: 5.6E-49
score: 167.6
IPR0162881, 4-beta cellobiohydrolasePANTHERPTHR34876FAMILY NOT NAMEDcoord: 36..299
IPR0364341, 4-beta cellobiohydrolase superfamilyGENE3D3.20.20.40coord: 11..301
e-value: 1.3E-68
score: 233.7
IPR0364341, 4-beta cellobiohydrolase superfamilySUPERFAMILY51989Glycosyl hydrolases family 6, cellulasescoord: 3..299
NoneNo IPR availablePANTHERPTHR34876:SF41,4-BETA-D-GLUCAN CELLOBIOHYDROLASE C-RELATEDcoord: 36..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:324370..325281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6872.t1Gvermi6872.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 324370..325281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6872.t1 ID=Gvermi6872.t1|Name=Gvermi6872.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=304bp
MIQNPLAGQELDVTEQQVDRWIRYHRNDPRADLFRDHLANQPVFQWVGDW
VPDIRRHVSRIVNHAKANQALFQIVIYNIPNRDAGGFSAGGAASKREYMQ
WIRVVASAIGSAKGILCIEPDALAHAHSFSGRKKEQRIQILREVVLIFTR
RCRNAYIYLDVGHPAWLSAAHATELFFDAGGRFAHGVSLNVSNSQTTEDC
FHYGVSIVERVSLSHGMIIDTSRNGAGPPPRTLTGTEAWANVPTNRLGMQ
PTLRVNPPNVFNNRLHGLLWIKVPGESDGNYRGAPHAGQFWPEGALRLIG
RET*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016288Beta_cellobiohydrolase
IPR036434Beta_cellobiohydrolase_sf