Gvermi6866.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6866.t1
Unique Name	Gvermi6866.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	467

Homology

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BLAST of Gvermi6866.t1 vs. uniprot
Match: A0A2V3IUD3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUD3_9FLOR)

HSP 1 Score: 624 bits (1610), Expect = 4.640e-221
Identity = 301/464 (64.87%), Postives = 363/464 (78.23%), Query Frame = 0

Query:    4 SLRIVFTLLAAVLVTTRAQIPTEREENCGSLISSVVSVCSHPTLSRPDWCCNELIKWNNARCWCEPSAFDALDAVAKSGNAYSFRDGFCPEAFYRPARGTIRPEFATCPPFDSFPDTDGSEGCDIAPAELRAQRVESLKSLQGDAVQNLADLGSWFQRMDALLGEEATFEMVGLFLAHGRFEVKQYFMTRQGLYNFLPMTSAETASQFWRNPYTVSYSATSTVPEGTFLQQHFVSFERCSARVDKFYIVDEQYQQRYGQFWDPNSSPLMSRYIKSSTEWCTTVSERCTGTHYPFADDADCQAFYNEMKGAGQVTCNKFSQAYVPQYALHGDILACRSFYLDLAIVEAAGACKAVGRTPSQTRCDESQCAGAAFIDPAAHNIAEAQFDEVPTLTCSDTECADSWPSEAQIALIPEEDRGRFVTSADGFTLTDASTPVVAAAAVEAVNAQPVSAEEQFGTEG-LNV 466
            S++++    A + V+  AQ+P  REE+CG++ISSV+SVCSHPTLSRPDWCCNELIKWN+ARCWCEPSAFDALD +A++GNA+SFRDGFCP  F+RPA G+IRPEFA CP F S PDTD SE C I  A+LR QR+ SL +L  D+VQNLADLG WF RMDAL  EEA  EMVGLFL  GRFEVKQY +TRQ LY+FLP+ + ET+  FWRNP  VSY +  T     F QQ FV+FERCS RV++  IVD  YQ+RYGQFWDP+SS LM+RY +SS EWCTTV ERC G  YPFADDADCQAFYN+MKG GQVTCNKFSQ Y+PQYA+HGD+LACR+FYLDLAIV+AAGAC AVG+TP+Q RCDESQCAGA+++DP +H+ A  QF E P+LTC+ T C ++WP++ QI  IPEE+R +F     GFTLTDA+TP +AA  V       V+AE++F  +G LNV
Sbjct:    4 SVQLLAAFAAILAVSVHAQVPPGREESCGAIISSVISVCSHPTLSRPDWCCNELIKWNDARCWCEPSAFDALDTIAQTGNAFSFRDGFCPGTFFRPAWGSIRPEFANCPAFVSTPDTDTSEQCSIDSAQLRIQRMASLDALSTDSVQNLADLGPWFLRMDALFTEEAELEMVGLFLGRGRFEVKQYLLTRQQLYSFLPIVATETSKHFWRNPRMVSYRSLHTTSARDFTQQFFVTFERCSPRVERVNIVDNHYQRRYGQFWDPSSSQLMARYQQSSYEWCTTVRERCAGDSYPFADDADCQAFYNDMKGKGQVTCNKFSQPYIPQYAMHGDVLACRNFYLDLAIVDAAGACPAVGKTPNQFRCDESQCAGASYVDPFSHDSATPQFSENPSLTCTATSCVENWPTQEQIDEIPEEERTKFA-GGSGFTLTDATTPEIAAGGVT-----EVTAEQEFEEDGGLNV 461

The following BLAST results are available for this feature:

BLAST of Gvermi6866.t1 vs. uniprot

BLAST of Gvermi6866.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IUD3_9FLOR	4.640e-221	64.87	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..466
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..17

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24229	contig	ScGOVlb_24229:245912..247452 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6866.t1	Gvermi6866.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24229 245912..247452 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6866.t1 ID=Gvermi6866.t1|Name=Gvermi6866.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=467bp
MTGSLRIVFTLLAAVLVTTRAQIPTEREENCGSLISSVVSVCSHPTLSRP
DWCCNELIKWNNARCWCEPSAFDALDAVAKSGNAYSFRDGFCPEAFYRPA
RGTIRPEFATCPPFDSFPDTDGSEGCDIAPAELRAQRVESLKSLQGDAVQ
NLADLGSWFQRMDALLGEEATFEMVGLFLAHGRFEVKQYFMTRQGLYNFL
PMTSAETASQFWRNPYTVSYSATSTVPEGTFLQQHFVSFERCSARVDKFY
IVDEQYQQRYGQFWDPNSSPLMSRYIKSSTEWCTTVSERCTGTHYPFADD
ADCQAFYNEMKGAGQVTCNKFSQAYVPQYALHGDILACRSFYLDLAIVEA
AGACKAVGRTPSQTRCDESQCAGAAFIDPAAHNIAEAQFDEVPTLTCSDT
ECADSWPSEAQIALIPEEDRGRFVTSADGFTLTDASTPVVAAAAVEAVNA
QPVSAEEQFGTEGLNV*