Gvermi6860.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6860.t1
Unique NameGvermi6860.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length85
Homology
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A2V3IUA9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA9_9FLOR)

HSP 1 Score: 153 bits (386), Expect = 2.250e-46
Identity = 67/84 (79.76%), Postives = 81/84 (96.43%), Query Frame = 0
Query:    1 MSSYWEGDYPPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            MS+YWEG+YPPS++LG+GK+VPSSL++ +SA+AL+LG YCVYQSNLI+PLS+ SVNPQFIVGSLLVPISWGLHVAGWIQGKN+K
Sbjct:   44 MSTYWEGEYPPSEILGLGKDVPSSLFVFSSAIALLLGCYCVYQSNLINPLSSESVNPQFIVGSLLVPISWGLHVAGWIQGKNNK 127          
BLAST of Gvermi6860.t1 vs. uniprot
Match: M2Y646_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y646_GALSU)

HSP 1 Score: 121 bits (304), Expect = 8.230e-34
Identity = 52/82 (63.41%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    3 SYWEGDYPPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            ++W G  PPS VLGIG++VPS+ YI++S V L++GSYCVY+SNL+SPL+  ++NP +++GSLLVP SWGLHVAGWIQ KN K
Sbjct:   52 TFWTGKVPPSTVLGIGEKVPSAAYIISSVVCLLVGSYCVYESNLLSPLTVTTINPLYVLGSLLVPYSWGLHVAGWIQLKNGK 133          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A7S1XBA2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBA2_9RHOD)

HSP 1 Score: 120 bits (302), Expect = 1.200e-33
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    1 MSSYWEGDYPPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            + + W+G +PPS VLG GK+VPS  YI +S VALV+G YC  QSNLISPL+  +V P FI+GSLLVPISWGLHVAGWIQ +N+K
Sbjct:   39 VDTTWDGKFPPSTVLGFGKDVPSPFYIFSSFVALVVGGYCCTQSNLISPLTPETVRPDFILGSLLVPISWGLHVAGWIQRQNNK 122          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A1X6NZL8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZL8_PORUM)

HSP 1 Score: 118 bits (295), Expect = 1.980e-32
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    1 MSSYWEGDYPPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            M +YWEG  PPS VLG+GK VPS LY+LAS ++L LGSY VY+SNL SPL+  +V  Q+I+ SLL PISWGLHVA WIQ +N+K
Sbjct:   51 MDTYWEGKAPPSTVLGLGKNVPSGLYLLASVLSLALGSYGVYKSNLASPLTPSTVEAQYILASLLAPISWGLHVASWIQKQNNK 134          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A7S1TKR9_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKR9_9RHOD)

HSP 1 Score: 107 bits (267), Expect = 2.190e-28
Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = 0
Query:   10 PPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            P S+VLG+GK VP+ LY++ S ++L LGSY V Q NL +PL+   +NPQF+VGSLLVPISWGLHVAGWIQ +N K
Sbjct:   43 PSSEVLGLGKNVPAGLYLILSVLSLGLGSYAVAQQNLFTPLTPNGINPQFVVGSLLVPISWGLHVAGWIQMQNKK 117          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A7S3SKP9_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3SKP9_9SPIT)

HSP 1 Score: 102 bits (253), Expect = 6.790e-26
Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 0
Query:    3 SYW-EGDYPPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            ++W + DYP S VLGIGK+VPSS+Y + SA+A  +G+YC+ QSN+I+ LS  +VN  ++ G+LLVP SWGLHVA WIQ +N K
Sbjct:   64 TWWGDKDYPSSVVLGIGKDVPSSIYGVTSAIAFSVGAYCIAQSNIINILSGSTVNGFYVAGALLVPYSWGLHVAAWIQKQNGK 146          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A7S0BHG5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHG5_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 2.460e-23
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   10 PPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            P S VLGIG+++P S +++ S +AL LG Y V +SNL+ PL+  SV P +++GSLL+PISWG HVA WIQ KN K
Sbjct:   46 PESAVLGIGEKIPGSFFLMMSVLALFLGGYSVSESNLLEPLTPNSVKPLYVLGSLLLPISWGCHVAAWIQFKNGK 120          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A4D9DAY0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAY0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.600e-23
Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    2 SSYWEGDYPPSDVLG-IGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            S+YWEG  P S VLG    +VPS +   AS VAL++G+YCV++SN+ + L+  S+NP +++GS L PISWG+HVA WIQ +N K
Sbjct:   47 STYWEGKAPSSAVLGPFLAKVPSGVLGPASLVALMVGAYCVHESNIFNILTVDSINPAYVLGSFLTPISWGMHVAAWIQKQNGK 130          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A5J4YR43_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YR43_PORPP)

HSP 1 Score: 94.0 bits (232), Expect = 5.100e-23
Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    8 DYPPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            +YP S+VLG+GK +PS+LY+L S     +G   V +SNLI+PL+  S+NPQ++VGSLL+PISWG H A +IQ  N K
Sbjct:   45 NYPSSEVLGLGKNIPSALYVLISIACFAIGVTSVAKSNLITPLTPESINPQYVVGSLLLPISWGAHTAAFIQKVNKK 121          
BLAST of Gvermi6860.t1 vs. uniprot
Match: A0A7S2ZK14_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZK14_9RHOD)

HSP 1 Score: 90.9 bits (224), Expect = 8.570e-22
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 0
Query:   10 PPS-DVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPLSAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK 84
            PPS  VLGIG+++P + +++ S + L +G Y V +SNL  PL+AG+V P +++GSLL+PISWG HVA WIQ KN  
Sbjct:   47 PPSPSVLGIGEKIPGAFFLMMSVLCLFMGGYSVAESNLFDPLTAGTVKPLYVLGSLLLPISWGCHVAAWIQFKNGN 122          
The following BLAST results are available for this feature:
BLAST of Gvermi6860.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUA9_9FLOR2.250e-4679.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2Y646_GALSU8.230e-3463.41Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S1XBA2_9RHOD1.200e-3365.48Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NZL8_PORUM1.980e-3264.29Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TKR9_9RHOD2.190e-2864.00Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S3SKP9_9SPIT6.790e-2656.63Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
A0A7S0BHG5_9RHOD2.460e-2356.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A4D9DAY0_9STRA4.600e-2352.38Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A5J4YR43_PORPP5.100e-2354.55Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2ZK14_9RHOD8.570e-2252.63Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..84
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 55..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:231622..231876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6860.t1Gvermi6860.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 231622..231876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6860.t1 ID=Gvermi6860.t1|Name=Gvermi6860.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=85bp
MSSYWEGDYPPSDVLGIGKEVPSSLYILASAVALVLGSYCVYQSNLISPL
SAGSVNPQFIVGSLLVPISWGLHVAGWIQGKNSK*
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