Gvermi6858.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6858.t1
Unique NameGvermi6858.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1760
Homology
BLAST of Gvermi6858.t1 vs. uniprot
Match: A0A2V3IX67_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX67_9FLOR)

HSP 1 Score: 523 bits (1348), Expect = 2.060e-152
Identity = 528/1686 (31.32%), Postives = 752/1686 (44.60%), Query Frame = 0
Query:   85 RQSSSRMRLELRRIGATPEVV--ASPSVPSP----YNLRSHRRPVGSVRTDSVVLSRPAFMHKQDVENASTTTLQDVCSRFGIEATGGKERMRARILAKMAEKTTDDFSAQVVEGRTRRAPAVAEDAGTEQRANCLTTSTTKKNLASISDPIFRGVGDVHGKSDRPDADVNVPPVLPPAPVESRPARSWMTDRSAMGKPGGQKPPPTPPLTIPNAALPPRGSMSSPLNNPAESMDGSAPLNAGSIFQDWLRTNRRLSTAEYEACVQALRGSVRDGSSLRRPSNKSAGGAASLGVAMVPSAITKRVPKRSATQG-LPSPVVANGVRARIPTTPGVRSSSGCPPFSKSGAKEVIQRLPPNQPSQDEAASNPLDVEGPKAGDITSERNTRGAQVDTLLMRLQQVPQPTPVDASSVVARKGGDGTMPDVRSLPKQFTGARGGPNDQNTDRSGALHRGGNEGKPSLDENWLDRLLGDRFKTVPMKENPQYGDMVTPQQLLKHFNE------SPVPTMAKGKVHASMLGKGSATRKKDRYFPPHPRETVARIRKRNQERVREREWRERLRLLDKQKREEARLSLYKREPIESESGGELQDFRNVLSTKKTVYEIARMRAHQPPASPPLPPRAKRALRFLEALKNQTSEVH-THVRKXXXXXXXXXXXXKVRLKGKFSGLST-FGDGSS------SESSTDYERPPDEGVLWKKIRKRQLKELQKLKAKQAREREEEAAKNMQLSVDGTQRADVLRGKEVETEQKEAKGEIGSRP--LSEPERGVKENVKDGATQQAPQASGSIRKAFSS-PHGRQVGKPPTGTFNPFAAPF------KPSLSKFE--------AVPTNPMPRGTGKAASGKPEKYIGNESNDNSNKAPNFSNMVANNNMAGDLRDPKPLQGENGKESKPSLAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDDDVVFSFSA--------------PEEFTPTTSYEFGNSKKRIREENDTNAEYAGGDQNSIAQAKNENPAGS-----IHISAETLIGKAT------LGLSKTTKSQRESEMRNASD-GVEDEIEPCGSNGKQSNPSSLSSVPAFANS----RLQVTRAEARIAVGEGKSLT---------------------KATTAHGVFGPISNQR----KDHDDRDGTGIAEDVQVQDQAQ-----ETK----PFGSSDVTSALFGKQTFSMEKPEGVSKQEKANLDNALSQPAGPHP----ANENKEAKSPGLFAFQPASAEQSKSADVDPVKNLADHKPSEKKIQPPMFS-SALAAPSAQQKPSSAPFQKPHATKQVQVLQKSS----PL---------KEKVGSQAEKKLEVKDPPMEKAQ-EPFTFGVANPAPKSLFGSSSLGS--QVNSGNQIGFSKTDVVA-------KKPSGDAMATMESAADRVKDPKPLFGTNSKV-QEAPFGAFKTPPVAPAPLFGSSSTQPPSAPFSFGKPDEKEQKQPG-PFGEAKFSSSFKSIGPASSFVFGASDP---AKSKSSPVAPAPFAANASNPQATQAS---ANPFAPP--SSPPFTAAPTGFGTFAQSQGFSFLGESSSFGPSQPVGFNSSTPTVASNSFGSTSFGNSSNVGFGKEGSKPSFTFG 1630
            R+ SSR+ LE+RRIGA+P     A PS        YNLR  RRP  S  TDSV++SRP F+HK DV+NAST+TL+ +C+RFG+   G KE +RARILAKMAEKT DDFSA+  +      P    D       N +TTSTTKKNLASI+DPI RG GD+HGKSDRP+AD N  P+       S+PARSW+TDRS M +  GQ+ PPTPPL +P  A+PPR    SP  +P  S+D SAPL++G+I QDWL ++R+LS AEY+ACVQALR SV+DG S RRP  +    A S GV+MVPSA  +R+P R +T   LP   V+N  R  +P TPGVRSS+G P    + A EV Q+ P N+ S+ E   +   V+     D TSE   +GA  D    R QQ  Q  PV+  S  A++    +     +LP  F GA GGP D N DR     +G       L+  W+++ L +RFK  PMKE+ +YGDMV P+Q L HFNE      +P+P      ++   L       KK+  FPP PR+ + R++   ++R  ER+W E+LR LD ++R++ RL++++ +P+ES  GGEL DFR  +  + T++E  R +  +PP SPPL  +AKRAL FL+A++++   V  + VRK            + R+ G F G +T F D ++      +    DYERP DE V  +  +K++L++ QK   K+A E E+                  LR K         K   G++P  L EP+   KE  K     +  ++SG    +F   P  +     PT + + F  P       KP    F         AV ++ +   + + A  +  K + +   D   +A +      +  +       KP    +  +  P  A T                                                                               ++D  +FS ++                            +K+R+   N            S A A    P+ S     +    + + G  T      LG + T ++ +E      +  G E +++P    G    P++ +  P          L+  + ++R  +G G  L                      K T      G   + R    K  +    TGI     +  +AQ     ETK    P   SDV     G   F      G+    +A++         P      A+  K  +S G F     ++EQ K++          HK  E   Q P      ++ P    KPS + F    A + +  +++S+    PL         KE+  S  + K +   P     Q +P +               SLG+    N  N++ F   +           K  GDAMAT +     VKD KP+F T +K  Q APF  F+  P      FGS   + PSAPF+FGKP+    KQ G PFG+AKF+  F+ +  ASSFVFG+  P   A +++     AP  +    P   +     ++PFA P  +  PF  AP+GFG   Q QGFS  G S + G S   G  S+ PT          FG S         S P F+FG
Sbjct:   67 RRPSSRLPLEMRRIGASPHNTHAAPPSXXXXXXGGYNLRPRRRPPHSTNTDSVMMSRPDFVHKGDVDNASTSTLRGICNRFGVTNAGNKEALRARILAKMAEKTVDDFSARPNDDLRASTPVPDPDCDRND-PNVITTSTTKKNLASINDPIVRGAGDIHGKSDRPEADFNQLPLPAATLPSSQPARSWLTDRSVMERTFGQRAPPTPPLALPTGAVPPRPGPPSPRASPGVSVDVSAPLSSGAILQDWLSSHRQLSPAEYDACVQALRSSVKDGVSHRRPPMRVPVAAGSFGVSMVPSATGRRMPVRPSTSAQLPLQAVSNAFRVPVPLTPGVRSSTGIPSSRYANAAEVTQQ-PRNEASRTEVVPDNHQVQSSVPNDTTSEM--KGAS-DGSRRRQQQTAQSLPVNMPSSHAKRESKASTLPHPALPSHFAGAAGGPGDNNIDRPAVPDQGSKRETSGLE--WMNKFLSERFKDRPMKEDAKYGDMVPPEQTLHHFNEYQRPKDAPLPPATMVAINEKRLSAA----KKEFKFPPLPRDILKRMKAEREKRALERKWEEKLRGLDIEQRKKVRLAMWQNKPVESILGGELVDFRESVKKEPTLFERMRAKLAEPPKSPPLSMKAKRALAFLKAMRDENRNVQRSRVRKPEFAPSLPPSMKRQRISGGFFGTATPFRDSANGIQNQAAMQDDDYERPLDEVVRARMYKKKRLEQRQKELEKKAFETED------------------LRAK--------CKINFGAKPDTLKEPQAPSKEQEKTAPVDRTLESSGPQTGSFKGFPPAKLSETKPTNSISLFGQPLPSAQELKPEQPSFTLGFNNGEGAVQSSVLSTTSKETAVPQVAKILDDSVRDIDKRAASEGAKPFDPFVPASSMSQKPRGSSDNAQELPPTAPTRPLSNHSFGFKPDSESGHAKLGSLWSQPLQKPSQANNVNMGEKDEEKTAVRSLFGQTVEESKLESKNDAEAKKSEVAKQNED--MFSPASMXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRRVDTHNPNGKRPFTSFPLSSASASANPPSRSSLRFGLDSGKKAMDGTGTTGEGVPLGTTGTGQNYQEGGKEAVTGTGTETDLQP----GMGIVPTAGNLAPTKTTGTDQDHLRGAQKDSRTGIGTGLHLGMAMRRGTGTAVDPPRQTGEAWKETGTEPSLGTCQSHRTRPQKGSEPESTTGIRTGTVMDSKAQAERKPETKEVSDPQADSDVNR---GAGLFKPRVHTGIYSNTEAHVTENAPTSTAPQGSSTIADFGKHEESKGSFL---GTSEQPKASG-------PQHKGEEGVQQAPSTGFPQISIP----KPSGSVFGS--AARSIPEIKQSNKTEAPLAFGVEYDEAKEEENSTVKSKADASKPVFGNGQSQPLSSAAGTXXXXXXXXXXSLGTGNSSNQTNKLSFGSKNPFGLTQSGSDDKSGGDAMATTD-LPPVVKDSKPVFSTENKATQAAPFAGFQPTP------FGSVVQETPSAPFAFGKPEGDADKQSGGPFGDAKFNRGFQ-LDSASSFVFGSEKPLPEATAEAEAFGGAPIPSTTGGPSTLKPDLPQSHPFAKPPLTVSPFATAPSGFGAAVQGQGFSIPGSSGALGTSSASGNQSAFPTPG--------FGTSGTXXXXXXXSNPVFSFG 1674          
The following BLAST results are available for this feature:
BLAST of Gvermi6858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IX67_9FLOR2.060e-15231.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 772..797
NoneNo IPR availableGENE3D1.20.1480.30coord: 954..1047
e-value: 2.1E-8
score: 36.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1189..1385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..938
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 757..773
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 956..1006
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 846..862
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1689..1727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1359..1376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1423..1504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1124..1138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 506..540
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1216..1241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1145..1165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1562..1621
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1518..1759
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1082..1103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1655..1675
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 808..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1323..1358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1198..1213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 735..1165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 780..797
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..1759
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:223794..229073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6858.t1Gvermi6858.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 223794..229073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6858.t1 ID=Gvermi6858.t1|Name=Gvermi6858.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1760bp
MRRFLSAVAHALRGSHPEDDYSDTEESVGASEGAFSAGSRPHAHQGAAAD
PIQAPKPPSSHDAYAVPAAPGAPLAKDALPKTPPRQSSSRMRLELRRIGA
TPEVVASPSVPSPYNLRSHRRPVGSVRTDSVVLSRPAFMHKQDVENASTT
TLQDVCSRFGIEATGGKERMRARILAKMAEKTTDDFSAQVVEGRTRRAPA
VAEDAGTEQRANCLTTSTTKKNLASISDPIFRGVGDVHGKSDRPDADVNV
PPVLPPAPVESRPARSWMTDRSAMGKPGGQKPPPTPPLTIPNAALPPRGS
MSSPLNNPAESMDGSAPLNAGSIFQDWLRTNRRLSTAEYEACVQALRGSV
RDGSSLRRPSNKSAGGAASLGVAMVPSAITKRVPKRSATQGLPSPVVANG
VRARIPTTPGVRSSSGCPPFSKSGAKEVIQRLPPNQPSQDEAASNPLDVE
GPKAGDITSERNTRGAQVDTLLMRLQQVPQPTPVDASSVVARKGGDGTMP
DVRSLPKQFTGARGGPNDQNTDRSGALHRGGNEGKPSLDENWLDRLLGDR
FKTVPMKENPQYGDMVTPQQLLKHFNESPVPTMAKGKVHASMLGKGSATR
KKDRYFPPHPRETVARIRKRNQERVREREWRERLRLLDKQKREEARLSLY
KREPIESESGGELQDFRNVLSTKKTVYEIARMRAHQPPASPPLPPRAKRA
LRFLEALKNQTSEVHTHVRKPDSLPPLPPRLKKVRLKGKFSGLSTFGDGS
SSESSTDYERPPDEGVLWKKIRKRQLKELQKLKAKQAREREEEAAKNMQL
SVDGTQRADVLRGKEVETEQKEAKGEIGSRPLSEPERGVKENVKDGATQQ
APQASGSIRKAFSSPHGRQVGKPPTGTFNPFAAPFKPSLSKFEAVPTNPM
PRGTGKAASGKPEKYIGNESNDNSNKAPNFSNMVANNNMAGDLRDPKPLQ
GENGKESKPSLAQTKPSLAQTKPSLAQTKPSLAQTKPSLAQTKPSFAQTK
PSLAQRKPSLVETKPSLAETKPSLAETKPSLAETKPSLAEPKTSDDDVVF
SFSAPEEFTPTTSYEFGNSKKRIREENDTNAEYAGGDQNSIAQAKNENPA
GSIHISAETLIGKATLGLSKTTKSQRESEMRNASDGVEDEIEPCGSNGKQ
SNPSSLSSVPAFANSRLQVTRAEARIAVGEGKSLTKATTAHGVFGPISNQ
RKDHDDRDGTGIAEDVQVQDQAQETKPFGSSDVTSALFGKQTFSMEKPEG
VSKQEKANLDNALSQPAGPHPANENKEAKSPGLFAFQPASAEQSKSADVD
PVKNLADHKPSEKKIQPPMFSSALAAPSAQQKPSSAPFQKPHATKQVQVL
QKSSPLKEKVGSQAEKKLEVKDPPMEKAQEPFTFGVANPAPKSLFGSSSL
GSQVNSGNQIGFSKTDVVAKKPSGDAMATMESAADRVKDPKPLFGTNSKV
QEAPFGAFKTPPVAPAPLFGSSSTQPPSAPFSFGKPDEKEQKQPGPFGEA
KFSSSFKSIGPASSFVFGASDPAKSKSSPVAPAPFAANASNPQATQASAN
PFAPPSSPPFTAAPTGFGTFAQSQGFSFLGESSSFGPSQPVGFNSSTPTV
ASNSFGSTSFGNSSNVGFGKEGSKPSFTFGAGAGSAAPSFGTSTGAGAAN
PFGAPKPSQVSQPSQPSQNAFGASPFGAHSESRPLFGATPSAPFSQGNPF
GGNNKTETGFGGRPSEAPSSNNPFNARGGPPSGPGAFAMGSTGAPTTRRK
FVKARRTKR*
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