Gvermi6848.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6848.t1
Unique Name	Gvermi6848.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	394

Homology

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BLAST of Gvermi6848.t1 vs. uniprot
Match: A0A2V3IX75_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX75_9FLOR)

HSP 1 Score: 184 bits (466), Expect = 1.270e-50
Identity = 173/384 (45.05%), Postives = 224/384 (58.33%), Query Frame = 0

Query:   10 PMVSSVRETDSRMRKMENENFNFKIE----RKHWERVAWRKRDSLSYVQPDSFYDNSSEGSRNSNVHSDIMHPDKKIAILKGELNEARDNYEKLLSEVNQMRQENDELTIKAEQRGRDYENLSSXXXXXXXXXXXXXXXXXXXXGALRKELQVERTKAIENKHVAEEARREKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEHILAKERGLREEADRLVSQKAVELESALRKANDYLSDREGIKAALKAEMEKADTWDQANKLMEDGMRFFAAESKIYEDLKATIERGELKFAKTATYNPKWREDVAAHLNSCLKMLSLMEAETQARRMYVLKLGN----KRSSLAV 385
            P+V S+R  ++   K++N+NFN K+E    RK  +R    KRDS + +QP+++Y    +G R  +  SDIM   +K   +  EL EA+  Y +L ++ +Q++QE D L++KA+         S                       L                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    E+  +L K    REE D L+SQKA ELE ALRKANDYLSDRE IK+ L+AE+++ +TW+ A ++ME+G RF AAES+ Y DLK TIE G+ KF+  + YNP WRE+VA HLN+C KMLSL++AET +RR+YVLK G       S LAV
Sbjct:   11 PIVESMRTQEADKDKIQNDNFNLKLELDQLRKQMDRN--NKRDSSASLQPENYYTFDGDGHRRDSQRSDIMTATEKADAIMVELTEAQVRYAQLWNQFSQLQQEYDHLSVKAKXXXXXXXXXSMNFQQKADESLQRQNDSRSKLEILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERTRAKKKDDALLRAEQLAKESRQLLQKXXXXREEKDNLLSQKAAELEGALRKANDYLSDREAIKSTLRAEVQRTETWEDAKRIMEEGKRFIAAESRAYADLKKTIEEGKSKFSDRSEYNPSWREEVATHLNACAKMLSLLQAETLSRRLYVLKCGTPAGGSESKLAV 392

[Close]

BLAST of Gvermi6848.t1 vs. uniprot
Match: A0A2V3IP36_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP36_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 4.460e-24
Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 0

Query:  242 ETEHILAKERGLREEADRLVSQKAVELESALRKANDYLSDREGIKAALKAEMEKADTWDQANKLMEDGMRFFAAESKIYEDLKATIERGELKFAKTATYNP 342
            E+  +L +E+ LREE D L+S KA  LE ALRKANDYLSDR+ IK+  +AE+++ +TW+ A  +ME+G RF AAES+ Y  LK  +E G+ KF+    YNP
Sbjct:   40 ESRQLLQEEKALREEKDNLLSLKAAVLEGALRKANDYLSDRQAIKSTYRAEVQRTETWEHAKLIMEEGKRFIAAESRAYAQLKKIVEEGKFKFSDRTEYNP 140

The following BLAST results are available for this feature:

BLAST of Gvermi6848.t1 vs. uniprot

BLAST of Gvermi6848.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IX75_9FLOR	1.270e-50	45.05	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IP36_9FLOR	4.460e-24	51.49	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..239
None	No IPR available	COILS	Coil	Coil	coord: 82..116
None	No IPR available	COILS	Coil	Coil	coord: 128..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24229	contig	ScGOVlb_24229:158202..159383 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6848.t1	Gvermi6848.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24229 158202..159383 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6848.t1 ID=Gvermi6848.t1|Name=Gvermi6848.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=394bp
MISESHSRPPMVSSVRETDSRMRKMENENFNFKIERKHWERVAWRKRDSL
SYVQPDSFYDNSSEGSRNSNVHSDIMHPDKKIAILKGELNEARDNYEKLL
SEVNQMRQENDELTIKAEQRGRDYENLSSDFTKKANELQQRKDEYNKKLG
ALRKELQVERTKAIENKHVAEEARREKDEANRRFEASQRQINEIQIRSDG
LQMEKEVIQAALTEAKTSLDKEKTRAKKKEDALMRTEQLARETEHILAKE
RGLREEADRLVSQKAVELESALRKANDYLSDREGIKAALKAEMEKADTWD
QANKLMEDGMRFFAAESKIYEDLKATIERGELKFAKTATYNPKWREDVAA
HLNSCLKMLSLMEAETQARRMYVLKLGNKRSSLAVHNSNLEVA*