Gvermi6847.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6847.t1
Unique NameGvermi6847.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
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BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A2V3IUI2_9FLOR (Methylglyoxal synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUI2_9FLOR)

HSP 1 Score: 312 bits (799), Expect = 2.080e-105
Identity = 158/218 (72.48%), Postives = 182/218 (83.49%), Query Frame = 0 
Query:    1 MLVAKFRANVTVKDRRYHFNKYKQCFVGSEAVDWLVDSGHAKTRKAAVDVGERMRHMGLFDHVVFEHGFEDKNYFYSFNDDEPLAMDDLPDMS---QRKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMSAIS 215
            ML+++FRA+V +KDRR+H  KYK CFVGSEAVDWLV +   +TR+ AV +GE+MR MGLF HV  +H F+DK YFY+FND  PL MDD+ DM     +KGIALIAHNN K  L+EWAQ HK+ALSKH LVATGTTGSLI + TGL+V LM SGPLGGDQQIGALVAEQ+I+VLIFFWDPLTAQPH+SDVKALLRLAVLCNAAIAMN  TADLL+SAIS
Sbjct:    8 MLISEFRASVPIKDRRHHLIKYKNCFVGSEAVDWLVAANPDRTREEAVKIGEQMRKMGLFHHVHLDHDFKDKRYFYAFNDKVPLTMDDMDDMELDDDKKGIALIAHNNFKGDLIEWAQTHKNALSKHKLVATGTTGSLIKKATGLNVDLMKSGPLGGDQQIGALVAEQTINVLIFFWDPLTAQPHDSDVKALLRLAVLCNAAIAMNTFTADLLISAIS 225
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A0F4P6G5_PSEO7 (Methylglyoxal synthase n=14 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A0F4P6G5_PSEO7)

HSP 1 Score: 152 bits (385), Expect = 1.120e-43
Identity = 74/118 (62.71%), Postives = 92/118 (77.97%), Query Frame = 0 
Query:   95 RKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            +K IAL+AH+ +K  LLEW Q H D+L +H L ATGTTG+LI +HTGL+V  + SGP+GGDQQIGA +AEQ + VLIFFWDPL +QPH+ DVKALLRLA + N  +A N  TADLLM+
Sbjct:   11 KKHIALVAHDGMKPALLEWCQTHLDSLKQHKLYATGTTGNLIEKHTGLEVTKLFSGPMGGDQQIGAKIAEQDVHVLIFFWDPLASQPHDPDVKALLRLAAVWNIPVACNEATADLLMA 128
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A553FIJ2_9GAMM (Methylglyoxal synthase n=1 Tax=Thalassomonas sp. M1454 TaxID=2594477 RepID=A0A553FIJ2_9GAMM)

HSP 1 Score: 150 bits (379), Expect = 8.770e-43
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 0 
Query:   93 SQRKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            +Q K I+L+AH+N+K  L+ W  KHKD L+KHNL  TGTTG+L+    GLDV  + SGPLGGDQQIGAL+ EQ I ++IFFWDPL AQPH+ DVKALLRLA + N  +A N  TAD L++
Sbjct:    9 AQHKNISLVAHDNMKPALIAWCIKHKDKLNKHNLYGTGTTGTLLKNKAGLDVNALISGPLGGDQQIGALITEQKIDMMIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNQSTADFLIN 128
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A369WV64_9GAMM (Methylglyoxal synthase n=1 Tax=Motiliproteus coralliicola TaxID=2283196 RepID=A0A369WV64_9GAMM)

HSP 1 Score: 149 bits (377), Expect = 1.930e-42
Identity = 71/121 (58.68%), Postives = 92/121 (76.03%), Query Frame = 0 
Query:   92 MSQRKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            M+  K IAL+AH+N K +LL WA++H+DALS+H L ATGTTGSL+S   GL+V  + SGP+GGDQQ+GA +AE  I +L+FFWDPL  QPH+ DVKALLR+A + N  +A N+ TAD L S
Sbjct:    8 MAASKSIALVAHDNRKESLLNWAERHRDALSRHQLFATGTTGSLLSNRLGLEVNALLSGPMGGDQQLGAKIAEGKIELLVFFWDPLEQQPHDPDVKALLRIAAVWNIPVACNLATADFLFS 128
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A290QK08_9BACT (Methylglyoxal synthase n=1 Tax=Nibricoccus aquaticus TaxID=2576891 RepID=A0A290QK08_9BACT)

HSP 1 Score: 149 bits (376), Expect = 2.340e-42
Identity = 77/125 (61.60%), Postives = 91/125 (72.80%), Query Frame = 0 
Query:   88 DLPDMSQRKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            +L  +  RK IAL+AH++ K +LL WA+ H+DAL+KH L  TGTTG +I+   GL V    SGP+GGDQQIGA +AEQ I VLIFFWDPL AQPH+ DVKALLRLAVL N   AMN  TAD L S
Sbjct:    7 ELAPLPARKRIALVAHDHEKDSLLAWARVHRDALAKHELFGTGTTGGMIASELGLPVHRFLSGPIGGDQQIGAALAEQRIDVLIFFWDPLAAQPHDPDVKALLRLAVLWNVPCAMNPATADFLFS 131
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A3E0UHN4_9GAMM (Methylglyoxal synthase n=2 Tax=Thalassotalea euphylliae TaxID=1655234 RepID=A0A3E0UHN4_9GAMM)

HSP 1 Score: 149 bits (376), Expect = 2.490e-42
Identity = 71/118 (60.17%), Postives = 93/118 (78.81%), Query Frame = 0 
Query:   95 RKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            +K +AL+AH+N+K++L+EW+  H + L  H L ATGTTG+LI++ TGL V  + SGPLGGDQQIGAL+ EQ I VLIFFWDPL AQPH+ DVKALLRLA + N  +A N+ +ADLL++
Sbjct:   11 QKSVALVAHDNMKASLIEWSNTHIEQLKNHQLYATGTTGALIAKQTGLSVSQLISGPLGGDQQIGALITEQKIDVLIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNIASADLLIT 128
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A0G9LAB3_9CLOT (Methylglyoxal synthase n=3 Tax=root TaxID=1 RepID=A0A0G9LAB3_9CLOT)

HSP 1 Score: 149 bits (375), Expect = 3.420e-42
Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = 0 
Query:   92 MSQRKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            M + K IALIAH+N KS L+EWA+++K+ LSKH L  TGTT SLISE TGL V+   SGP+GGDQQIGA +    I +++FFWDPLT+QPH+ DVKALLR+AVL + AIAM+  TAD L+S
Sbjct:    6 MGKAKKIALIAHDNRKSALIEWAEENKEMLSKHILCGTGTTASLISEKTGLKVQGFKSGPMGGDQQIGAAIVNGEIDLMVFFWDPLTSQPHDPDVKALLRIAVLYDVAIAMSKSTADFLLS 126
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A2E2XGU1_9GAMM (Methylglyoxal synthase n=1 Tax=Cellvibrionaceae bacterium TaxID=2026723 RepID=A0A2E2XGU1_9GAMM)

HSP 1 Score: 149 bits (375), Expect = 3.530e-42
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 0 
Query:   92 MSQRKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            +S+ K IAL+AH++ K  LL W Q+H D+LS HN  ATGTTG+LI + TGL +  + SGPLGGDQQIGAL+ E  I VLIFFWDPLTAQPH+ DVKALLRLA + N  +A N  TAD L++
Sbjct:    8 VSEVKSIALVAHDHKKQDLLHWCQRHIDSLSPHNFFATGTTGNLIEKETGLPITKLISGPLGGDQQIGALITEHKIDVLIFFWDPLTAQPHDPDVKALLRLAAVWNIPVACNESTADFLVT 128
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A4P5S4A7_9ACTN (Methylglyoxal synthase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5S4A7_9ACTN)

HSP 1 Score: 147 bits (372), Expect = 8.320e-42
Identity = 70/119 (58.82%), Postives = 89/119 (74.79%), Query Frame = 0 
Query:   94 QRKGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            + K IAL+AH+N+K  LLEW + H+D LS H LV TGTTG L+S+ TGL V  + SGPLGGDQQIGA +A+  + VL+FFWDPL  QPH+ D+KALLR+AV+ N  +A N  TAD +MS
Sbjct:   10 KHKVIALVAHDNMKDELLEWVEHHRDQLSLHTLVGTGTTGKLVSDQTGLSVERLRSGPLGGDQQIGARIADGDVDVLLFFWDPLEPQPHDPDIKALLRIAVVWNIPVACNRATADFIMS 128
[Close]
BLAST of Gvermi6847.t1 vs. uniprot
Match: A0A4P7JWP6_9GAMM (Methylglyoxal synthase n=2 Tax=unclassified Thalassotalea TaxID=2614972 RepID=A0A4P7JWP6_9GAMM)

HSP 1 Score: 147 bits (372), Expect = 1.000e-41
Identity = 68/117 (58.12%), Postives = 91/117 (77.78%), Query Frame = 0 
Query:   96 KGIALIAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSGPLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVLTADLLMS 212
            K IAL+AH+N+K+ L++W ++HK  L KH L ATGTTG+ + +  GLD+  + SGPLGGDQQIGAL+ EQ I ++IFFWDPL AQPH+ DVKALLRLA + N  +A N+ TAD+L++
Sbjct:   12 KNIALVAHDNMKAALIDWCKQHKQQLIKHRLFATGTTGAQLEQQAGLDINKLISGPLGGDQQIGALITEQKIDMMIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNISTADMLIT 128
The following BLAST results are available for this feature:
BLAST of Gvermi6847.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUI2_9FLOR2.080e-10572.48Methylglyoxal synthase n=1 Tax=Gracilariopsis chor... [more]
A0A0F4P6G5_PSEO71.120e-4362.71Methylglyoxal synthase n=14 Tax=Pseudoalteromonas ... [more]
A0A553FIJ2_9GAMM8.770e-4360.00Methylglyoxal synthase n=1 Tax=Thalassomonas sp. M... [more]
A0A369WV64_9GAMM1.930e-4258.68Methylglyoxal synthase n=1 Tax=Motiliproteus coral... [more]
A0A290QK08_9BACT2.340e-4261.60Methylglyoxal synthase n=1 Tax=Nibricoccus aquatic... [more]
A0A3E0UHN4_9GAMM2.490e-4260.17Methylglyoxal synthase n=2 Tax=Thalassotalea euphy... [more]
A0A0G9LAB3_9CLOT3.420e-4261.98Methylglyoxal synthase n=3 Tax=root TaxID=1 RepID=... [more]
A0A2E2XGU1_9GAMM3.530e-4261.16Methylglyoxal synthase n=1 Tax=Cellvibrionaceae ba... [more]
A0A4P5S4A7_9ACTN8.320e-4258.82Methylglyoxal synthase n=1 Tax=Actinomycetia bacte... [more]
A0A4P7JWP6_9GAMM1.000e-4158.12Methylglyoxal synthase n=2 Tax=unclassified Thalas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000591DEP domainSMARTSM00049DEP_3coord: 6..80
e-value: 2.1E-21
score: 87.1
IPR000591DEP domainPFAMPF00610DEPcoord: 10..78
e-value: 3.5E-22
score: 78.2
IPR000591DEP domainPROSITEPS50186DEPcoord: 6..80
score: 16.453064
IPR011607Methylglyoxal synthase-like domainSMARTSM00851MGS_2acoord: 109..202
e-value: 2.8E-14
score: 63.4
IPR011607Methylglyoxal synthase-like domainPFAMPF02142MGScoord: 110..194
e-value: 1.2E-15
score: 57.4
IPR011607Methylglyoxal synthase-like domainPROSITEPS51855MGScoord: 87..220
score: 18.440742
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..85
e-value: 2.4E-27
score: 96.8
IPR004363Methylglyoxal synthaseTIGRFAMTIGR00160TIGR00160coord: 95..215
e-value: 1.6E-50
score: 168.8
IPR004363Methylglyoxal synthasePANTHERPTHR30492METHYLGLYOXAL SYNTHASEcoord: 93..213
IPR004363Methylglyoxal synthaseHAMAPMF_00549Methylglyoxal_synthcoord: 96..215
score: 29.90675
IPR004363Methylglyoxal synthaseCDDcd01422MGScoord: 98..211
e-value: 1.91936E-59
score: 180.899
IPR036914Methylglyoxal synthase-like domain superfamilyGENE3D3.40.50.1380coord: 88..220
e-value: 1.0E-52
score: 179.8
IPR036914Methylglyoxal synthase-like domain superfamilySUPERFAMILY52335Methylglyoxal synthase-likecoord: 92..214
IPR018148Methylglyoxal synthase, active sitePROSITEPS01335METHYLGLYOXAL_SYNTHcoord: 149..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..220
NoneNo IPR availableCDDcd04371DEPcoord: 1..76
e-value: 3.47667E-23
score: 87.0109
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 6..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:157111..157773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6847.t1Gvermi6847.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 157111..157773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6847.t1 ID=Gvermi6847.t1|Name=Gvermi6847.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MLVAKFRANVTVKDRRYHFNKYKQCFVGSEAVDWLVDSGHAKTRKAAVDV
GERMRHMGLFDHVVFEHGFEDKNYFYSFNDDEPLAMDDLPDMSQRKGIAL
IAHNNLKSTLLEWAQKHKDALSKHNLVATGTTGSLISEHTGLDVRLMNSG
PLGGDQQIGALVAEQSISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAI
AMNVLTADLLMSAISDSKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000591DEP_dom
IPR011607MGS-like_dom
IPR036388WH-like_DNA-bd_sf
IPR004363Methylgl_synth
IPR036914MGS-like_dom_sf
IPR018148Methylglyoxal_synth_AS
IPR036390WH_DNA-bd_sf