Gvermi6817.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6817.t1
Unique NameGvermi6817.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length271
Homology
BLAST of Gvermi6817.t1 vs. uniprot
Match: A0A2V3ISH9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISH9_9FLOR)

HSP 1 Score: 419 bits (1076), Expect = 3.330e-146
Identity = 203/267 (76.03%), Postives = 227/267 (85.02%), Query Frame = 0
Query:    1 MQSVAFLSPIPTPRSHTPVR--TRARICCTASPPATTGTPTLQRFLNWFRSDFDNYYQAAHDRSNGVPYSRIHEHMHCRLQPLNNKDLVPEGHAAVFATYWYNGNADIVYRRRLYTLRDLQDDALEMRIYKMSFIHGLMVAKAKSRFDSVHMGSVDDTALYEHLEGSQILWRYVAEPHPGSDFVQNGPHFLGAMRYGSFTSKDSLRYEDDLVLTKEDLWVSERVYNADGVMVGGNRDGIPHKMRRVRRQDEIKWTMDLDLPDLNLPE 265
            M S AFLS +P   S  P     R RI CTASP ATT  PTLQRFL+WFRSDFDNYYQ AHDRS+GV YSRIHEH+HCRLQPL N+DL P GHAAVFATY+YNGN DIVYRRRLYTL D ++DA+EMR+YKM FIHGL+VA+A S FDS+ MGSV+D  LYEHL+G+QILWRYV E HPGSD V NGPHF G MR+GS+TS+DSLRYED+LVLTKEDLWV ERV+N+DGVMVGG+RDGIPHKMRRVRRQDEIKWT+D DLPDLNLPE
Sbjct:    1 MHSPAFLSSLPARLSPAPXXXXARPRISCTASPTATT--PTLQRFLSWFRSDFDNYYQVAHDRSSGVSYSRIHEHVHCRLQPLLNEDLAPPGHAAVFATYYYNGNPDIVYRRRLYTLSD-EEDAVEMRVYKMCFIHGLLVARANSNFDSLDMGSVNDPVLYEHLDGAQILWRYVEEHHPGSDLVANGPHFFGTMRHGSYTSRDSLRYEDELVLTKEDLWVRERVFNSDGVMVGGHRDGIPHKMRRVRRQDEIKWTLDFDLPDLNLPE 264          
BLAST of Gvermi6817.t1 vs. uniprot
Match: A0A2V3IVI5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVI5_9FLOR)

HSP 1 Score: 125 bits (313), Expect = 2.580e-30
Identity = 82/232 (35.34%), Postives = 127/232 (54.74%), Query Frame = 0
Query:   40 LQRFLNWFRSDFDNYYQAAHDRSNGVPYSRI---HEHMHCRLQPLNNKDLVPEGHAAVFATYWYNGNADIVYRRRLYTLR---DLQDDALEMRIYKMSFIHGLMVAKAKSRFDSVHMGSVDDTALYEHLEGSQILW-RYV--AEPHPGSDFV---QNGPHFLGAMRYGSFTSKDS-----LRYEDDLVLTKEDLWVSERVYNADGVMVGGNRDGIPHKMRRVRRQDEIKWTM 254
            L+RF+  F  DFDNY Q   +RS GV Y R    HEH+HC +  + + DL+       FA Y++NGN+  V+R RLY +    D +   +EMRI++       ++  A    D++     D   +Y+ ++G ++ W RYV  A+ H  +  V   + GP F+G M+ G            ++  DDL+LT EDLWV++R ++ +   + GNR GIP+KM+RVRR    +WT+
Sbjct:   96 LERFVQLFSGDFDNYEQVRLERSQGV-YPREGGGHEHIHCSINQIAS-DLL-------FAKYYFNGNSRQVFRSRLYQVNARDDSERGVIEMRIFRFYEETERLLKAANYDIDAIQW---DRNDVYDWMQGCEVFWERYVPPADEHDEACQVLGIEGGPRFVGYMKGGGCEVHSREIGARIKVMDDLLLTSEDLWVADRGFDLNDHFIYGNRLGIPYKMKRVRRGSSAEWTL 315          
BLAST of Gvermi6817.t1 vs. uniprot
Match: A0A2E6YT05_9GAMM (Uncharacterized protein n=2 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A2E6YT05_9GAMM)

HSP 1 Score: 76.3 bits (186), Expect = 2.110e-12
Identity = 62/221 (28.05%), Postives = 100/221 (45.25%), Query Frame = 0
Query:   44 LNWFRSDFDNYYQAAHDRSNGVPYSRIHEHMHCRLQPLNNKDLVPEGHAAVFATYWYNGNADIVYRRRLYTLR-DLQDDALEMRIYKMSFIHGLMVAKAKSRFDSVHMGSV--DDTALYEHLEGSQILWRYVAEPHPGSDFVQNGPHFLGAMRYGSFTSKDSLRYEDDLVLTKEDLWVSERVYNADGVMVGGNRDGIPHKMRRVRR--------QDEIKWT 253
            + WF   +DN  Q   +    V  +  HE +H    P+   DL   G    +     N +   +YR+R+Y  R D +++A+ + I+    +  L+ A      D   +  +  + T +   L G  + WR  A     S FV  G     A  Y S  S   + + DDL+LT++ LW+S+R ++ DG  V G+  G+PHK R+ RR        Q + +WT
Sbjct:   32 MQWFPGVYDNQEQVYFEAEQEVDEALRHERIHHVFAPV---DLPAFGEQVFYVQQHLNDDPSDIYRQRIYVFRPDYEENAVRLAIHIPHDVKSLVDA----HLDPGKLSGLLPEQTRV---LPGCDVFWRREA-----SQFV--GYMKPDACSYMSSESGKRIIFNDDLLLTEDALWISDRAHDEDGNRVFGHPTGVPHKNRKARRFECWMTALQRDGEWT 235          
BLAST of Gvermi6817.t1 vs. uniprot
Match: A0A520SCK0_9GAMM (Uncharacterized protein n=2 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A520SCK0_9GAMM)

HSP 1 Score: 75.1 bits (183), Expect = 6.800e-12
Identity = 57/211 (27.01%), Postives = 95/211 (45.02%), Query Frame = 0
Query:   44 LNWFRSDFDNYYQAAHDRSNGVPYSRIHEHMHCRLQPLNNKDLVPEGHAAVFATYWYNGNADIVYRRRLYTLR-DLQDDALEMRIYKMSFIHGLMVAKAKSRFDSVHMGSV--DDTALYEHLEGSQILWRYVAEPHPGSDFVQNGPHFLGAMR-----YGSFTSKDSLRYEDDLVLTKEDLWVSERVYNADGVMVGGNRDGIPHKMRRVRR 246
            + WF   +DN  Q   +   G+  S  HE +H   +P    +L   G    +     N +   +YR+R+Y  R D + +A+ + IY  + +  L+ A      D   +  +  + T +   L G  + W+  A             HF+G M      Y S  S   + + DDL+LT++ LW+S+R  +  G +V G+  G+PHK R+ RR
Sbjct:   65 MEWFPGVYDNQEQVYFEEEQGIDESLRHERIHHVFEPA---ELPAFGQHVFYVQQHLNDDPAQIYRQRIYAFRPDYEANAIRLTIYTPNDVAPLVDA----HLDPAKLAGLTPEQTRV---LPGCDVFWQRRAN------------HFVGYMEPDACSYVSRESNKRIIFNDDLLLTQDALWISDRARDEAGNVVFGHPAGVPHKNRKARR 253          
BLAST of Gvermi6817.t1 vs. uniprot
Match: A0A2E9AA74_9ALTE (Uncharacterized protein n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E9AA74_9ALTE)

HSP 1 Score: 73.6 bits (179), Expect = 1.860e-11
Identity = 60/226 (26.55%), Postives = 100/226 (44.25%), Query Frame = 0
Query:   44 LNWFRSDFDNYYQAAHDRSNGVPYSRIHEHMHCRLQPLNNKDLVPEGHAAVFATYWYNGNADIVYRRRLYTLR-DLQDDALEMRIYKMSFIHGLMVAKAKSRFDSVHMG--SVDDTALYEHLEGSQILWRYVAEPHPGSDFVQNGPHFLGAMR-----YGSFTSKDSLRYEDDLVLTKEDLWVSERVYNADGVMVGGNRDGIPHKMRRVRR--------QDEIKWT 253
            + WF   +DN  Q   ++   V  +  HE +H   +P+    L   G    +     N +   +YR+R+Y  R D ++ A+ + I+  + +  L+ A      D   +   S + T +   L G  + WR            +   HF+G M      Y S  S   + + DDL+LT+E LW+S+R  + +G  V G+  G+PHK R+ RR        Q + +WT
Sbjct:   32 MAWFPGVYDNQEQVYFEQEQEVDEALRHERIHHVFEPVY---LPAFGEHVFYVQQHLNDDPAQIYRQRIYAFRPDYEEGAIRLTIHIPNDVASLVDA----HLDPTKLSGLSPEQTRV---LPGCDVFWR------------RQSNHFVGYMTPNACSYVSSESGKRIIFNDDLLLTEEALWISDRAQDEEGNRVFGHPTGVPHKNRKARRFECWMTAMQRDGEWT 235          
The following BLAST results are available for this feature:
BLAST of Gvermi6817.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3ISH9_9FLOR3.330e-14676.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVI5_9FLOR2.580e-3035.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2E6YT05_9GAMM2.110e-1228.05Uncharacterized protein n=2 Tax=Halieaceae bacteri... [more]
A0A520SCK0_9GAMM6.800e-1227.01Uncharacterized protein n=2 Tax=Halieaceae bacteri... [more]
A0A2E9AA74_9ALTE1.860e-1126.55Uncharacterized protein n=4 Tax=Gammaproteobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 43..243
e-value: 2.1E-11
score: 44.1
IPR038672Chromophore lyase CpcT/CpeT superfamilyGENE3D2.40.128.590CpcT/CpeT domaincoord: 35..259
e-value: 1.5E-28
score: 101.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2379864..2380676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6817.t1Gvermi6817.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2379864..2380676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6817.t1 ID=Gvermi6817.t1|Name=Gvermi6817.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=271bp
MQSVAFLSPIPTPRSHTPVRTRARICCTASPPATTGTPTLQRFLNWFRSD
FDNYYQAAHDRSNGVPYSRIHEHMHCRLQPLNNKDLVPEGHAAVFATYWY
NGNADIVYRRRLYTLRDLQDDALEMRIYKMSFIHGLMVAKAKSRFDSVHM
GSVDDTALYEHLEGSQILWRYVAEPHPGSDFVQNGPHFLGAMRYGSFTSK
DSLRYEDDLVLTKEDLWVSERVYNADGVMVGGNRDGIPHKMRRVRRQDEI
KWTMDLDLPDLNLPEHLAEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010404CpcT/CpeT
IPR038672CpcT/CpeT_sf