Gvermi6811.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6811.t1
Unique NameGvermi6811.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length725
Homology
BLAST of Gvermi6811.t1 vs. uniprot
Match: A0A2V3J3V5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V5_9FLOR)

HSP 1 Score: 419 bits (1076), Expect = 3.540e-134
Identity = 289/659 (43.85%), Postives = 375/659 (56.90%), Query Frame = 0
Query:   94 MKADGSIKQNGGVLNISFIPPFVVSDDAEEQVAIDKNSRLRAGLWKEASRFDWDSRSRILQLLFIMAAFSATLNGWIGSSECYSPASAIEIWKRFSDPSFCTAAMPTEEVSSPQDIRQGWETAVKVIKANVAELYHDKEKPIPPRLRRWGRQTEFAVRITDVQERTVLWFGQLVSEMCVMTHDRLAQQSAGLKT-FLKPLAAQAEASFVALLEREVGVSLDKF-NWKSVFSEEKALELLSRCQYSVKVLRKMPEESSESAMPHSDRDEDENMEEQA----------NSERNGTKNQELKSNERREVLSPISPDVDVSQTRKQNRTESISKQQVGSSLQRETDIN--YAAQEQSTHDDNIGESETDGSSPSL-NRTHQVPNDSGDNQKSVISSEQK--EMIVDRDAYIQTIPKDHSFLTGQNDSGNLVKDEEHVAEHSSNRVYSTNHGNYTEAPVGQYRHHERESENTQKRSGRYIGMXXXXXXXXXXXASEINVPKKKARLQVNQYNDFREHDRFQTDEFIAQAQANQPSRADPIHTLGIAPSIADSAAGSTFHPHDQHR-GFEFSSGRRYGKKQILYSRRLNGSSNSIPKMDPG----------NVSESHRKRIAEKIALQVKREVLLRRQRSDKVEKNGRHLVVPPKKRLKYLKPNQ 724
            MKADGSIKQNGGVLNI+FIPPFV+SDDAEEQV+IDK SR+RAGLWKEASRFDWDSRSRILQLLF+MAAF ATL GWIGSS+CYSP + I IWKRF+DPSFCT+ M  E  SSPQDIRQGWE AVKVIK+NV ELYHDKEKPIPPRLRRWGRQTEFAVR+ DVQ RTV W  QL+ EMC +T++RL+++   L   FLK  A QAE ++  LLERE+G++LD+  NWK  FSEEK L      + S   + +  E SS SA   S++D+ +N               + +R     ++ K  E+ +VLSPISPDVD  +  K NR E+    + GSS Q +   +   A  E   HD      + D  SP+L  +  +   + G   K++ S  Q   E + D D     +    +       SG L +  +   E+ S+           E  V    H E +     + S     +            +  N PKKKAR +++Q N +R      T   + + Q  Q +RA    + G       +  G    P D      + +S  +  K   L  R  +G    + K D             V+ESH KR+ E+IALQV++E LLRRQR D VE++G+H++VPP+KR +YLK  Q
Sbjct:    1 MKADGSIKQNGGVLNIAFIPPFVISDDAEEQVSIDKTSRVRAGLWKEASRFDWDSRSRILQLLFVMAAFCATLTGWIGSSDCYSPEAVIAIWKRFADPSFCTSTMHPEHTSSPQDIRQGWEIAVKVIKSNVGELYHDKEKPIPPRLRRWGRQTEFAVRLPDVQSRTVSWCAQLMQEMCFLTYNRLSERFKNLDAQFLKQFATQAEEAYTVLLEREIGIALDQSPNWKESFSEEKVLRDFCDHRDSNGAMNQHSENSSGSAASESEQDDAQNXXXXXXXXXXXXXXHDHDRMEVDTEQRKHGEQEDVLSPISPDVDTLRDTKLNRREAGMSLEQGSSDQNKIKPSKGVANTEDPMHD--ASNEKCDDPSPALFKKLGERIREEGT--KAIRSKLQNYAEDVSDFD----DVQLHQNAQVQYRSSGTLSRRGQGREENGSD-----------EDEVRAPNHQENQDRLGAQESFENHRVNAVQPNTMGSVRAVSNPPKKKARTRLHQ-NGYRS-----TGNEVEE-QPGQRTRAKSYGSHG-------NHHGGMVTPDDPEEFRHKDTSTAQPSKANSLKYRHGHGHEPPLTKGDDAINEEPTGKEEEVTESHHKRLVERIALQVRKEALLRRQRGDMVERHGKHIIVPPRKRPQYLKTFQ 626          
BLAST of Gvermi6811.t1 vs. uniprot
Match: A0A2V3IV05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV05_9FLOR)

HSP 1 Score: 187 bits (476), Expect = 6.670e-52
Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 0
Query:  159 MAAFSATLNGWIGSSECYSPASAIEIWKRFSDPSFCTAAMPTEEVSSPQDIRQGWETAVKVIKANVAELYHDKEKPIPPRLRRWGRQTEFAVRITDVQERTVLWFGQLVSEMCVMTHDRLAQQSAGLKT-FLKPLAAQAEASFVALLEREVGVSLDKF-NWKSVFSEEKAL 327
            MAAF ATL GWIGS + YSP + I IWKR +D S  T+ M  E  SSPQ IR GWE AV+VIK+N+ ELYHDKEKP PPRLR+WGRQTEFA R+ D+Q RT+    QL+ E+C +T+ RL ++   +   FLK  A Q E ++  L ER++G+ LD F NWK   SEEK +
Sbjct:    1 MAAFCATLTGWIGSPDWYSPEAGIGIWKRLADRSSWTSTMHPENTSSPQYIRLGWEIAVRVIKSNIGELYHDKEKPNPPRLRKWGRQTEFATRLRDLQSRTLSLCAQLMQEICFLTYHRLLERFKNVHAQFLKQFARQPEEAYTVLWERKIGIDLDHFPNWKESVSEEKVV 171          
The following BLAST results are available for this feature:
BLAST of Gvermi6811.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3V5_9FLOR3.540e-13443.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV05_9FLOR6.670e-5254.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 622..642
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..560
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..434
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..724
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2363108..2365282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6811.t1Gvermi6811.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2363108..2365282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6811.t1 ID=Gvermi6811.t1|Name=Gvermi6811.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=725bp
MDINSRKGFPPPNKSNLYRLLKRFRSILEHNQLAIRPSQPNNETTLLKVC
EKLCHRKKLCVRLLKLSGLCVMPEVMQTLHRYRHLRVYSYREYMKADGSI
KQNGGVLNISFIPPFVVSDDAEEQVAIDKNSRLRAGLWKEASRFDWDSRS
RILQLLFIMAAFSATLNGWIGSSECYSPASAIEIWKRFSDPSFCTAAMPT
EEVSSPQDIRQGWETAVKVIKANVAELYHDKEKPIPPRLRRWGRQTEFAV
RITDVQERTVLWFGQLVSEMCVMTHDRLAQQSAGLKTFLKPLAAQAEASF
VALLEREVGVSLDKFNWKSVFSEEKALELLSRCQYSVKVLRKMPEESSES
AMPHSDRDEDENMEEQANSERNGTKNQELKSNERREVLSPISPDVDVSQT
RKQNRTESISKQQVGSSLQRETDINYAAQEQSTHDDNIGESETDGSSPSL
NRTHQVPNDSGDNQKSVISSEQKEMIVDRDAYIQTIPKDHSFLTGQNDSG
NLVKDEEHVAEHSSNRVYSTNHGNYTEAPVGQYRHHERESENTQKRSGRY
IGMGRETQSVEKRQASEINVPKKKARLQVNQYNDFREHDRFQTDEFIAQA
QANQPSRADPIHTLGIAPSIADSAAGSTFHPHDQHRGFEFSSGRRYGKKQ
ILYSRRLNGSSNSIPKMDPGNVSESHRKRIAEKIALQVKREVLLRRQRSD
KVEKNGRHLVVPPKKRLKYLKPNQ*
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