Gvermi6807.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6807.t1
Unique NameGvermi6807.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length153
Homology
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BLAST of Gvermi6807.t1 vs. uniprot
Match: A0A2V3J3G5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3G5_9FLOR)

HSP 1 Score: 150 bits (378), Expect = 1.040e-43
Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0 
Query:    1 MAFVLNLPRTSTAPVWITPTC-KRKNNRRPNRRNRRAHHKPGSKSNTDLMEKVDIDTTDITTYVSCPICFNSIMLRPQHLTDAPLRIVCNCCEQETDATLERLENMDGTPFNAMAWRKG 118
            MAFVL  P T  +   + P C +R +NRRP RR RR+      + +  ++   D+DTTDITTY+SCP+CFNSIMLRPQ LT APL +VCNCC Q T+ATLERLEN+DGTPFNAMAWRKG
Sbjct:    1 MAFVL-FPSTPCSSTRVPPICGRRTSNRRPPRRTRRSPRSSSRQRSDPILNDDDVDTTDITTYISCPVCFNSIMLRPQQLTKAPLTVVCNCCGQHTEATLERLENLDGTPFNAMAWRKG 118
The following BLAST results are available for this feature:
BLAST of Gvermi6807.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3G5_9FLOR1.040e-4361.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2351672..2352296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6807.t1Gvermi6807.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2351672..2352296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6807.t1 ID=Gvermi6807.t1|Name=Gvermi6807.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=153bp
MAFVLNLPRTSTAPVWITPTCKRKNNRRPNRRNRRAHHKPGSKSNTDLME
KVDIDTTDITTYVSCPICFNSIMLRPQHLTDAPLRIVCNCCEQETDATLE
RLENMDGTPFNAMAWRKGQDDYHRNHGLDDTEVNFARQWKARSVIKYLLM
LT*
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