Gvermi6779.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6779.t1
Unique NameGvermi6779.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length86
Homology
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BLAST of Gvermi6779.t1 vs. uniprot
Match: A0A2V3J6N5_9FLOR (Complex1_LYR_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6N5_9FLOR)

HSP 1 Score: 134 bits (336), Expect = 2.740e-39
Identity = 64/85 (75.29%), Postives = 78/85 (91.76%), Query Frame = 0 
Query:    1 MTAPPSSRSVLSLYRALLRAVRHYPSMKRDSLAKAIKEDFREKRNMSGDQLEKALWLGHMELERLQKWVPTSKQMADGKDMDIKL 85
            MTA  +S +VL+LYR LLRAVRHYPS KRDS+++AIKE+FREKR+++GD+L+KALWL +MELERLQKW+PTSKQMA GKDMDIKL
Sbjct:    1 MTASTTSTNVLALYRGLLRAVRHYPSKKRDSISQAIKEEFREKRSITGDELDKALWLANMELERLQKWIPTSKQMAQGKDMDIKL 85
The following BLAST results are available for this feature:
BLAST of Gvermi6779.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6N5_9FLOR2.740e-3975.29Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 8..63
e-value: 9.7E-12
score: 44.8
NoneNo IPR availableCDDcd20251Complex1_LYR_SFcoord: 10..63
e-value: 1.89314E-10
score: 49.4658

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2268278..2268713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6779.t1Gvermi6779.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2268278..2268713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6779.t1 ID=Gvermi6779.t1|Name=Gvermi6779.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=86bp
MTAPPSSRSVLSLYRALLRAVRHYPSMKRDSLAKAIKEDFREKRNMSGDQ
LEKALWLGHMELERLQKWVPTSKQMADGKDMDIKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom