Gvermi6767.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6767.t1
Unique NameGvermi6767.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length187
Homology
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A2V3J3M3_9FLOR (tRNA-specific adenosine deaminase 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3M3_9FLOR)

HSP 1 Score: 248 bits (634), Expect = 1.210e-81
Identity = 116/158 (73.42%), Postives = 139/158 (87.97%), Query Frame = 0
Query:   28 MQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKLHKRFEKGQLTLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNVHIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPKRRKVK 185
            M++A+ EAR+AL RGEVPVGCVL T DG TVATGSNRTNERGNATSHAE+VAFE+LS + K F+KG+LTLYVTCEPCIMC AAIVQM+V+G IVYGCSNPRFGGCGSVR+L +Y+   + H+P++QSGV+AATA+ LL +FY  TNPHAPKPK+R+VK
Sbjct:   20 MEVALYEARKALERGEVPVGCVLVTEDGETVATGSNRTNERGNATSHAELVAFEELSNVKKMFKKGELTLYVTCEPCIMCTAAIVQMEVVGHIVYGCSNPRFGGCGSVRSLDLYRGRPDGHVPTIQSGVEAATAIHLLGEFYNRTNPHAPKPKKRRVK 177          
BLAST of Gvermi6767.t1 vs. uniprot
Match: R7Q0B4_CHOCR (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0B4_CHOCR)

HSP 1 Score: 216 bits (551), Expect = 2.910e-69
Identity = 106/162 (65.43%), Postives = 131/162 (80.86%), Query Frame = 0
Query:   28 MQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKLHKRFEKGQLTLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQN----SSNVHIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPKRRKVK 185
            M+ A+EEAR+AL RGEVPVGC L    G  VA GSNRTNE GNATSHAE+VAFE L    ++F +G+LTLYVTCEPC+MCAAAIVQ+ +IG+IV+GCSNPRFGGCGSVR+L MY+       ++ +P +QSGV+AATAVQLL +FY  +NP+APKPK+R+VK
Sbjct:    1 MEKALEEARKALERGEVPVGCALIDTKGKCVAVGSNRTNELGNATSHAELVAFEALGA--QKFNRGELTLYVTCEPCVMCAAAIVQIGIIGKIVFGCSNPRFGGCGSVRSLNMYKECGKGGDDMFVPEIQSGVEAATAVQLLGEFYTRSNPNAPKPKKRRVK 160          
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A059C7N0_EUCGR (CMP/dCMP-type deaminase domain-containing protein n=11 Tax=Myrtoideae TaxID=1699513 RepID=A0A059C7N0_EUCGR)

HSP 1 Score: 135 bits (339), Expect = 1.050e-36
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 0
Query:   24 VCGVMQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKLHKR--FEKGQL-------TLYVTCEPCIMCAAAIVQMQVIG--RIVYGCSNPRFGGCGSVRALRMYQNSSNVHIPSVQS-------GVDAATAVQLLEQFYKTTNPHAPKPKRRKV 184
            + G MQLAI++A+ AL   EVPVGCV+   DG  +A G NRTNE  NAT HAEM A + L    +R  F   ++       +LYVTCEPCIMCAAA+    +IG   + YGC+N +FGGCGS+ +L    + + + I +  S       G+ A+ AV LL  FY+  NP+APKP R +V
Sbjct:   16 ILGFMQLAIDQAKLALDSLEVPVGCVI-VEDGNVIAAGRNRTNETRNATRHAEMEALDVLIIQWQRTGFTAAEVAEKFSACSLYVTCEPCIMCAAAL---SIIGIKEVYYGCANDKFGGCGSILSLHSSSSEAGISIGNCGSKGFKCCGGIMASEAVSLLRDFYEQGNPNAPKPHRSRV 190          
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A2T7PD21_POMCA (tRNA-specific adenosine deaminase 2 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PD21_POMCA)

HSP 1 Score: 134 bits (337), Expect = 1.460e-36
Identity = 82/161 (50.93%), Postives = 99/161 (61.49%), Query Frame = 0
Query:   28 MQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKLHKRFEKGQ------LTLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNVHIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPKRR 182
            M  A+  A  AL RGEVPVGC+    D   +ATG NR NE  NAT HAE+VA E++ +     +K Q      LTLYVT EPC+MCA A+ Q+ V   +VYGCSN RFGGCGSV  +   Q SS      V  GV A  AVQLL+QFYK  NP+ P+ KR+
Sbjct:    8 MSKAMVYAEEALERGEVPVGCIFVYED-QEIATGGNRVNETKNATCHAEIVAIEKVREWCSLRKKDQQDVFRALTLYVTVEPCVMCAGALRQIGV-PLVVYGCSNERFGGCGSVLNIAADQLSSLGPSFDVIKGVLAEEAVQLLKQFYKGENPNVPEDKRK 166          
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A7S3DIN7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DIN7_9EUKA)

HSP 1 Score: 132 bits (333), Expect = 4.120e-36
Identity = 76/157 (48.41%), Postives = 95/157 (60.51%), Query Frame = 0
Query:   28 MQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKLHKRFEKGQLTLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVR-ALRMYQNSSNVHIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPKRRK 183
            M  AIEEA  AL+ GEVPVGCV     G+  A G N TN+  NAT HAE+VA  +        +   LTLYVTCEPC+MCAAA+ +++ I RIVYGC N RFGGCGSV   L  +  S +V      +G     AV+L ++FY   N  AP+ KR+K
Sbjct:   15 MASAIEEAELALQEGEVPVGCVFVDQKGSIAARGHNATNKTRNATQHAEIVAMNEYFSTGHHSDLSGLTLYVTCEPCVMCAAALAKVK-IQRIVYGCGNDRFGGCGSVLDTLNEHCQSEDVE---TATGCREDEAVKLFKKFYARENERAPETKRKK 167          
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A8C0UYF1_CYACU (tRNA-specific adenosine deaminase 2 n=2 Tax=Cyanistes caeruleus TaxID=156563 RepID=A0A8C0UYF1_CYACU)

HSP 1 Score: 135 bits (339), Expect = 5.320e-36
Identity = 82/171 (47.95%), Postives = 105/171 (61.40%), Query Frame = 0
Query:   19 LTWLCVCGVMQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQL---SKLHKRFEKG---QLTLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNVHIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPKRRK 183
            L  L VC    L++ +A+ AL +GEVPVGC+L   +G  +  G N  NE  +AT HAEMVA +Q+    K HKR  +    QL LYVT EPCIMCAAA V++  I R+VYGC N RFGGCGSV ++   +   +       SG  A  AV+LL+ FY+  NP+APK K RK
Sbjct:   84 LASLSVC----LSVPQAKEALEKGEVPVGCLL-VYNGEVIGRGGNEVNETKDATRHAEMVAIDQVLDWCKQHKRDYREVFPQLVLYVTVEPCIMCAAA-VRLMKIPRVVYGCRNERFGGCGSVLSISSDEMVDSGDPFECSSGYRAEEAVELLKAFYRQENPNAPKSKVRK 248          
BLAST of Gvermi6767.t1 vs. uniprot
Match: F0WVZ6_9STRA (SUMO ligase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WVZ6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.840e-35
Identity = 75/163 (46.01%), Postives = 104/163 (63.80%), Query Frame = 0
Query:   26 GVMQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKLHKRFEK--GQLTLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNV-HIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPKRRKVK 185
            G M+ A+EEA RAL RGEVPVGCV        ++  SNRTNE  NAT HAE+VA + +   +        + T YVTCEPCIMCAAA++Q +V+ R+V+GC N RFGGCGSV  L +++ ++N+    S   G+    A++LL++FY+  NP     K++K K
Sbjct:   13 GFMREALEEAERALVRGEVPVGCVA-VYQNQIISFASNRTNELCNATKHAELVAIDYIVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVV-RVVFGCQNFRFGGCGSV--LSLHEPTANIPRTFSCHPGILRIEAIELLQRFYEQGNPRVQNSKQKKRK 171          
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A8C9NJM8_SERCA (tRNA-specific adenosine deaminase 2 n=5 Tax=Passeriformes TaxID=9126 RepID=A0A8C9NJM8_SERCA)

HSP 1 Score: 132 bits (333), Expect = 3.600e-35
Identity = 78/159 (49.06%), Postives = 99/159 (62.26%), Query Frame = 0
Query:   31 AIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQL---SKLHKRFEKG---QLTLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNVHIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPKRRK 183
            ++ +A+ AL +GEVPVGC+L   +G  +  G N  NE  NAT HAEMVA +Q+    K HKR  +    QL LYVT EPCIMCAAA+  M+ I R+VYGC N RFGGCGSV ++       +       SG  A  AV+LL+ FY+  NP+APK K RK
Sbjct:   86 SVPQAKEALEKGEVPVGCLL-VYNGEVIGRGRNEVNETKNATRHAEMVAIDQVLDWCKQHKRDYREVFPQLVLYVTVEPCIMCAAALRLMK-IPRVVYGCRNERFGGCGSVLSISSDDMVDSGDPFECSSGYRAEEAVELLKAFYRQENPNAPKSKVRK 242          
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A7S3UBR1_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UBR1_9CHLO)

HSP 1 Score: 131 bits (329), Expect = 5.110e-35
Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 0
Query:   28 MQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQ-LSKLHKRFEKGQL---TLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNVHIPSV-----QSGVDAATAVQLLEQFYKTTNPHAPKPKRR 182
            M+ A+EEA++AL +GEVPVGCV    DG+ +A GSN+TN   N T HAE  A ++ L+    R E+ +    TLYVTCEPCIMCA A+  ++ IG +VYGC N +FGGCGS+  +           P+      + G+    AV+LL QFY T NP APKP R+
Sbjct:   37 MEEALEEAKKALSQGEVPVGCVF-VRDGSVIARGSNKTNATRNPTRHAEFDAIDRILTACSGRMEEARFPECTLYVTCEPCIMCAGALCLIE-IGEVVYGCMNDKFGGCGSILDIASTGCGGCGKKPAPHGFKSRGGLFGKEAVELLRQFYITGNPAAPKPHRK 198          
BLAST of Gvermi6767.t1 vs. uniprot
Match: A0A7M7N6L0_STRPU (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N6L0_STRPU)

HSP 1 Score: 130 bits (328), Expect = 5.960e-35
Identity = 74/159 (46.54%), Postives = 103/159 (64.78%), Query Frame = 0
Query:   28 MQLAIEEARRALRRGEVPVGCVLRTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKL--HKRFEKGQL----TLYVTCEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNVHIPSVQSGVDAATAVQLLEQFYKTTNPHAPKPK 180
            M+ A+  A++AL RGEVPVGC+L   D   + TG N  NE  NAT HAE++A E+  +    K+ E+G+L     L+VT EPCIMCA A+ ++  I ++VYGC N RFGGCGS+ ++   +  S       ++G+ A TAVQLL++FYK  NP+AP PK
Sbjct:   13 MKEAVNMAKQALGRGEVPVGCLLVYED-QIIGTGGNAANETKNATRHAEILALEEAMRWCDDKQLERGELFSQTKLFVTVEPCIMCAGAL-RIMGIKKVVYGCRNERFGGCGSILSVNSDELPSIGEPFECKAGLYADTAVQLLQEFYKGQNPNAPNPK 169          
The following BLAST results are available for this feature:
BLAST of Gvermi6767.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3M3_9FLOR1.210e-8173.42tRNA-specific adenosine deaminase 2 n=1 Tax=Gracil... [more]
R7Q0B4_CHOCR2.910e-6965.43CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A059C7N0_EUCGR1.050e-3645.25CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A2T7PD21_POMCA1.460e-3650.93tRNA-specific adenosine deaminase 2 n=1 Tax=Pomace... [more]
A0A7S3DIN7_9EUKA4.120e-3648.41Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A8C0UYF1_CYACU5.320e-3647.95tRNA-specific adenosine deaminase 2 n=2 Tax=Cyanis... [more]
F0WVZ6_9STRA1.840e-3546.01SUMO ligase putative n=1 Tax=Albugo laibachii Nc14... [more]
A0A8C9NJM8_SERCA3.600e-3549.06tRNA-specific adenosine deaminase 2 n=5 Tax=Passer... [more]
A0A7S3UBR1_9CHLO5.110e-3546.34Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7M7N6L0_STRPU5.960e-3546.54CMP/dCMP-type deaminase domain-containing protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 26..185
e-value: 3.1E-48
score: 165.7
NoneNo IPR availablePIRSRPIRSR006769-1PIRSR006769-1coord: 27..171
e-value: 7.7E-10
score: 36.0
NoneNo IPR availablePIRSRPIRSR006769-3PIRSR006769-3coord: 27..171
e-value: 7.7E-10
score: 36.0
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASE FAMILY MEMBERcoord: 23..183
NoneNo IPR availablePANTHERPTHR11079:SF149TRNA-SPECIFIC ADENOSINE DEAMINASE 2coord: 23..183
NoneNo IPR availableCDDcd01285nucleoside_deaminasecoord: 28..136
e-value: 7.43213E-42
score: 134.667
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 27..123
e-value: 1.1E-21
score: 76.6
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 22..134
score: 24.172083
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 27..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2217233..2217793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6767.t1Gvermi6767.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2217233..2217793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6767.t1 ID=Gvermi6767.t1|Name=Gvermi6767.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=187bp
LRGARILRRDSGGEIGDCLTWLCVCGVMQLAIEEARRALRRGEVPVGCVL
RTADGTTVATGSNRTNERGNATSHAEMVAFEQLSKLHKRFEKGQLTLYVT
CEPCIMCAAAIVQMQVIGRIVYGCSNPRFGGCGSVRALRMYQNSSNVHIP
SVQSGVDAATAVQLLEQFYKTTNPHAPKPKRRKVKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016193Cytidine_deaminase-like