Gvermi6765.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6765.t1
Unique NameGvermi6765.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length209
Homology
BLAST of Gvermi6765.t1 vs. uniprot
Match: A0A2V3J3S1_9FLOR (30S ribosomal protein S6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3S1_9FLOR)

HSP 1 Score: 277 bits (708), Expect = 5.100e-92
Identity = 145/210 (69.05%), Postives = 168/210 (80.00%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIRKPITDAAKPIPDVDQPPPSGGRVNPDDPEYALQKFLAEYERDFANKDKEDQSKG--EPAEIDEVPSKPPSHASGEVSEVVASLKAWSQSEKPKKDHSLSWLSDLQRKPS 208
            MPYYEVLCLA G L RKELGSLLHKTCRAF+DNGA VTRI PLGATGNGPRDLAYRIRINQVS+HKGFFVNVCAFASP+ LAEV RQLKVDER+LRH+AIRKP TDA KPIPD+DQPP     V+ +DPE+AL++FL E+ERD A K+ E   K   E     E  +      +G+++EVVASLKAWS++EKP  D SL+WLSDL+R P+
Sbjct:    1 MPYYEVLCLASGKLGRKELGSLLHKTCRAFIDNGATVTRISPLGATGNGPRDLAYRIRINQVSHHKGFFVNVCAFASPKALAEVERQLKVDERMLRHIAIRKPTTDAVKPIPDIDQPPRVKTGVSKNDPEHALRQFLVEHERDLAVKEYEQTRKNVREALADGEHTAALRGGENGKMNEVVASLKAWSEAEKPNSDPSLNWLSDLKRNPT 210          
BLAST of Gvermi6765.t1 vs. uniprot
Match: A0A8H7Q6N6_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q6N6_MORIS)

HSP 1 Score: 67.8 bits (164), Expect = 2.790e-11
Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIR 101
            MP+YE++C+A+ NLA+  +  LL  +    +D G VV      G    G R+L +RI+ +Q  +  G +  +   A+P T+ ++ ++L+VD RVLRH  ++
Sbjct:    1 MPFYELVCIARSNLAKTNMHDLLKTSASQVLDKGGVVR-----GFENWGSRNLPHRIKRHQQYFDSGHYWLMHFDANPGTVQDLGKKLRVDPRVLRHTVVK 96          
BLAST of Gvermi6765.t1 vs. uniprot
Match: A0A2P6TP53_CHLSO (Mitochondrial ribosomal S6 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TP53_CHLSO)

HSP 1 Score: 66.6 bits (161), Expect = 1.400e-10
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIRK 102
            MP+YE+  LAK  L +++L  +L    +  M++G VVT IR  G      R LAY IR     Y +     V   A P TL E+   L+VDER+LR + +++
Sbjct:    1 MPFYELFALAKPGLGKQQLAQILRAVGQQVMEHGGVVTDIRSYGE-----RRLAYDIRQPGARYSEAAMWQVNFAAKPTTLQELDHTLRVDERMLRWMVLKR 97          
BLAST of Gvermi6765.t1 vs. uniprot
Match: I0YS97_COCSC (Mitochondrial ribosomal protein S6 (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YS97_COCSC)

HSP 1 Score: 65.5 bits (158), Expect = 1.440e-10
Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIRK 102
            MP YE+ C+A+  LAR E   L+     A +  G ++T I+  G      R+LAY IR   +  ++ F   +   A+P  L ++   LKVD+RV+R++ +R+
Sbjct:    1 MPLYELFCMARPALARTEASQLMRNAASAVLSKGGLLTDIKSYGQ-----RELAYEIRRPGMKINEAFMWQLDFAAAPPVLKDLEHLLKVDDRVVRYVILRR 97          
BLAST of Gvermi6765.t1 vs. uniprot
Match: E1ZC20_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZC20_CHLVA)

HSP 1 Score: 65.9 bits (159), Expect = 3.050e-10
Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIRK 102
            MP YE+  LAK  L +K + S++       M+ G VVT IR  G      R LAY IR   V + +     +   A+P TL E+   L+VDER+LR L +++
Sbjct:    1 MPLYELFALAKPQLGKKAIASIMKAVASKVMEQGGVVTDIRSYGE-----RKLAYDIRQPGVRHKEAAMWQINFAANPATLPELDHTLRVDERMLRWLVLKR 97          
BLAST of Gvermi6765.t1 vs. uniprot
Match: A0A258XBQ0_9PROT (30S ribosomal protein S6 n=1 Tax=Alphaproteobacteria bacterium 16-39-46 TaxID=1970490 RepID=A0A258XBQ0_9PROT)

HSP 1 Score: 59.7 bits (143), Expect = 7.810e-8
Identity = 34/101 (33.66%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIR 101
            MP YE + LA+ +L + +   L  K      +NG  VT++   G      R LAYRI+ N+    KG++  +   A+P+ +AE+ R +++DE +LR L +R
Sbjct:    1 MPLYECVFLARQDLTQSQSEGLAQKFSELLQNNGGKVTKVEHWGL-----RQLAYRIKKNR----KGYYHLMNIEATPEVVAEMERNMRLDEDMLRFLTVR 92          
BLAST of Gvermi6765.t1 vs. uniprot
Match: A0A6M8VPX6_9PROT (30S ribosomal protein S6 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VPX6_9PROT)

HSP 1 Score: 57.4 bits (137), Expect = 2.480e-7
Identity = 32/100 (32.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAI 100
            M +YE + + + +L+ K++  L     +   DNG  V R+   G      R LAYRIR N+    KG +V +   A+P  +AE+ RQ+++ E +LR +++
Sbjct:    1 MSFYETVFIVRQDLSEKQVEGLTSDYSKIIADNGGKVVRVEQWGL-----RTLAYRIRKNR----KGHYVLMHIDAAPAAVAEMERQMRLSEDILRFMSV 91          
BLAST of Gvermi6765.t1 vs. uniprot
Match: A0A3C2DXP2_9PROT (30S ribosomal protein S6 (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3C2DXP2_9PROT)

HSP 1 Score: 56.2 bits (134), Expect = 3.860e-7
Identity = 34/101 (33.66%), Postives = 53/101 (52.48%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIR 101
            MPYYE + +A+ +++     +L  K       NG  V +    G      R LAYRI+ N+    KG +      ASPQT+ E+ R +++DE +LR+L +R
Sbjct:    1 MPYYESVFIARQDVSASAAETLADKFADLLKTNGGAVAKREYWGL-----RPLAYRIKKNK----KGHYFLFNLEASPQTIQEMERNMRLDEDILRYLTLR 92          
BLAST of Gvermi6765.t1 vs. uniprot
Match: E6YL93_9HYPH (30S ribosomal protein S6 n=1 Tax=Bartonella rochalimae ATCC BAA-1498 TaxID=685782 RepID=E6YL93_9HYPH)

HSP 1 Score: 55.8 bits (133), Expect = 5.900e-7
Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIR 101
            M  YE + LA+ ++A +++  LL         NG  V R+   G      R LAYRIR N+ +Y+    +N+ A AS  T+AE+ RQ++++E +LR++ +R
Sbjct:    1 MALYEHIFLARQDIAPQQIDELLETYKGVIEANGGKVGRVENWGL-----RSLAYRIRKNRKAYY--VLINIDAPAS--TIAELERQMRINEDILRYMTVR 92          
BLAST of Gvermi6765.t1 vs. uniprot
Match: A0A067W664_9HYPH (30S ribosomal protein S6 n=4 Tax=Bartonella TaxID=773 RepID=A0A067W664_9HYPH)

HSP 1 Score: 55.8 bits (133), Expect = 1.380e-6
Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 0
Query:    1 MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGPRDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAIR 101
            M  YE + LA+ ++A +++  LL         NG  V R+   G      R LAYRIR N+ +Y+    +N+ A AS  T+AE+ RQ++++E +LR++ +R
Sbjct:    1 MALYEHIFLARQDIAPQQIDELLETYKGVIEANGGKVGRVENWGL-----RSLAYRIRKNRKAYY--VLINIDAPAS--TIAELERQMRINEDILRYMTVR 92          
The following BLAST results are available for this feature:
BLAST of Gvermi6765.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3J3S1_9FLOR5.100e-9269.0530S ribosomal protein S6 n=1 Tax=Gracilariopsis ch... [more]
A0A8H7Q6N6_MORIS2.790e-1133.66Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A2P6TP53_CHLSO1.400e-1037.25Mitochondrial ribosomal S6 n=1 Tax=Chlorella sorok... [more]
I0YS97_COCSC1.440e-1033.33Mitochondrial ribosomal protein S6 (Fragment) n=1 ... [more]
E1ZC20_CHLVA3.050e-1037.25Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A258XBQ0_9PROT7.810e-833.6630S ribosomal protein S6 n=1 Tax=Alphaproteobacter... [more]
A0A6M8VPX6_9PROT2.480e-732.0030S ribosomal protein S6 n=1 Tax=Proteobacteria ba... [more]
A0A3C2DXP2_9PROT3.860e-733.6630S ribosomal protein S6 (Fragment) n=1 Tax=Rhodos... [more]
E6YL93_9HYPH5.900e-734.6530S ribosomal protein S6 n=1 Tax=Bartonella rochal... [more]
A0A067W664_9HYPH1.380e-634.6530S ribosomal protein S6 n=4 Tax=Bartonella TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 4..101
e-value: 5.1E-14
score: 52.3
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..120
e-value: 1.0E-25
score: 91.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..163
NoneNo IPR availableCDDcd15465bS6_mitocoord: 4..102
e-value: 1.68067E-23
score: 87.9733
IPR020814Ribosomal protein S6, plastid/chloroplastHAMAPMF_00360Ribosomal_S6coord: 1..104
score: 11.497347
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 1..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2214881..2215507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6765.t1Gvermi6765.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2214881..2215507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6765.t1 ID=Gvermi6765.t1|Name=Gvermi6765.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=209bp
MPYYEVLCLAKGNLARKELGSLLHKTCRAFMDNGAVVTRIRPLGATGNGP
RDLAYRIRINQVSYHKGFFVNVCAFASPQTLAEVSRQLKVDERVLRHLAI
RKPITDAAKPIPDVDQPPPSGGRVNPDDPEYALQKFLAEYERDFANKDKE
DQSKGEPAEIDEVPSKPPSHASGEVSEVVASLKAWSQSEKPKKDHSLSWL
SDLQRKPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000529Ribosomal_S6
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR020814Ribosomal_S6_plastid/chlpt
IPR035980Ribosomal_S6_sf