Gvermi6745.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6745.t1
Unique NameGvermi6745.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length117
Homology
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A2V3J4V0_9FLOR (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4V0_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 1.820e-52
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 0
Query:    1 MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEINNISSQL 115
            MLSVHLREAER+KNELK ++  GA  VQ+AA  LSD LLK INED+QE+Y AERQIE+ELRN+ERLLSSNG+QIHQWT LLDRLT+ELKELGDVSNW  ++EKSA EI +IS QL
Sbjct:    1 MLSVHLREAERRKNELKPALEAGAKAVQEAAANLSDELLKVINEDVQEIYMAERQIESELRNIERLLSSNGYQIHQWTTLLDRLTSELKELGDVSNWAAIMEKSADEIRDISKQL 115          
BLAST of Gvermi6745.t1 vs. uniprot
Match: R7QBT4_CHOCR (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBT4_CHOCR)

HSP 1 Score: 124 bits (311), Expect = 1.720e-34
Identity = 69/115 (60.00%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    1 MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEINNISSQL 115
            ML+VHL+EAE+ K +L+  +  G   V +AA K SD LL  INED+   Y A+RQIE ELRNVERLL +N  Q  QW  LLDRLT ELKELGDVSNW+E LE +A EIN IS  L
Sbjct:    1 MLAVHLKEAEKAKQKLRPQLLQGERNVIRAAEKYSDILLTTINEDVSCAYVAQRQIELELRNVERLLVANANQNAQWMTLLDRLTRELKELGDVSNWLEHLEAAATEINEISKSL 115          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A397VFF2_9GLOM (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VFF2_9GLOM)

HSP 1 Score: 69.7 bits (169), Expect = 5.210e-13
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEI 108
            MLS  +RE  +K+  +K++         +A  +L+D L   +NE +  +++ +R+IE E R +    +    Q  QW N+LD + + LKELGDV NW EV+E+   EI
Sbjct:    1 MLSRLVREHNQKQQVIKRNNEQLRKEATQAVGELTDCLADTLNERVSSIFKTQREIEAEARRLSAHSAKFSKQTKQWLNMLDGVNSALKELGDVQNWAEVIERDMREI 108          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A397IUL3_9GLOM (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IUL3_9GLOM)

HSP 1 Score: 64.3 bits (155), Expect = 9.190e-11
Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEI 108
            MLS  ++E  +K+  ++++         ++  +++D L   +NE +  +++ +R+IE+E R +         Q  QW N+LD   + LKELGDV NW EV+EK   +I
Sbjct:    1 MLSRLVKEHNQKQQAVRRNNEQLRKEAVQSVSEVTDCLADTLNERVASIFKTQREIESEARRLSTQSLKYTKQTKQWLNMLDSFNSALKELGDVQNWAEVIEKDMRDI 108          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A397TG45_9GLOM (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TG45_9GLOM)

HSP 1 Score: 63.9 bits (154), Expect = 1.700e-10
Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEI 108
            MLS  +RE  +K+  ++++         +A  +++D+L   +NE +  + + +R+IE+E R +         Q  QW N+L+   + LKELGDV NW EV+EK   EI
Sbjct:    1 MLSRLVREHNQKQQAVRRNNEQLRKEAIQAVSEVTDSLADTLNERVTTILKTQREIESEARKLSAQSVKYTKQTKQWLNMLEGFNSALKELGDVQNWAEVIEKDMREI 108          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A1D1YY58_9ARAE (Biogenesis of lysosome-related organelles complex 1 subunit 1 (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=A0A1D1YY58_9ARAE)

HSP 1 Score: 62.8 bits (151), Expect = 5.250e-10
Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEI 108
            MLS  +RE  +K+  ++++         +A  +++D+L   +NE I  + + +R+IE+E R +         Q  QW ++L+   + LKELGDV NW EV+EK   EI
Sbjct:    7 MLSRLVREHNQKQQSVRRNNEQLRKEAVQAVSEVTDSLADTLNERISTILKTQREIESEARKLSVQSVKYTKQTKQWLSMLEGFNSALKELGDVQNWAEVIEKDMREI 114          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A8H3KSZ9_9GLOM (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3KSZ9_9GLOM)

HSP 1 Score: 63.5 bits (153), Expect = 1.980e-9
Identity = 35/108 (32.41%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEI 108
            MLS  +RE  +K+  ++++         +A  +++D+L   +NE +  + + +R+IE+E R +         Q  QW ++L+   + LKELGDV NW EV+EK   EI
Sbjct:    1 MLSRLVREHNQKQQAVRRNNEQLRKEAVQAVSEVTDSLADTLNERVSTILKTQREIESEARKLSAQSVKYAKQTKQWLSMLEGFNSALKELGDVQNWAEVIEKDMREI 108          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A1Y1YYF7_9FUNG (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=2 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1YYF7_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 4.130e-9
Identity = 27/73 (36.99%), Postives = 47/73 (64.38%), Query Frame = 0
Query:   31 ALKLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEK 103
            A +L+D ++  IN DI  +++ E+++ETE   ++ L+  +   + QW +L   L   LKELGDV NWV+++E+
Sbjct:   31 ASELNDIIVDEINSDISILFKNEKKLETESNKLQSLIKQHSKDVLQWNDLTKMLDNSLKELGDVQNWVDLIER 103          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A1Y1V8V0_9FUNG (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V8V0_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 1.000e-8
Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 0
Query:   33 KLSDALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEK 103
            +L+D ++  IN DI  +++ E++IE E   ++ L+  +   I QW +L   L   LKELGDV NW+E++E+
Sbjct:   33 ELNDIIVDEINSDISVLFKNEKKIEIESNKLQSLIIQHSKDILQWNDLTKMLDNSLKELGDVENWIELIER 103          
BLAST of Gvermi6745.t1 vs. uniprot
Match: A0A422P256_TRYRA (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A422P256_TRYRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.200e-8
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:   36 DALLKAINEDIQEVYQAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEVLEKSAIEINNISSQL 115
            DA++   N ++   +  E++IETEL+ V    +    Q+  WT L  +L  ELKE+GDVSNWV  +E+   E  ++  +L
Sbjct:  142 DAVVSGANAEVLAAFAREKKIETELKAVAACSAQLQMQMSAWTTLFGKLNTELKEMGDVSNWVRSIEEDLAETVHVLEEL 221          
The following BLAST results are available for this feature:
BLAST of Gvermi6745.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A2V3J4V0_9FLOR1.820e-5274.78Biogenesis of lysosome-related organelles complex ... [more]
R7QBT4_CHOCR1.720e-3460.00Biogenesis of lysosome-related organelles complex ... [more]
A0A397VFF2_9GLOM5.210e-1335.19Biogenesis of lysosome-related organelles complex ... [more]
A0A397IUL3_9GLOM9.190e-1131.48Biogenesis of lysosome-related organelles complex ... [more]
A0A397TG45_9GLOM1.700e-1033.33Biogenesis of lysosome-related organelles complex ... [more]
A0A1D1YY58_9ARAE5.250e-1033.33Biogenesis of lysosome-related organelles complex ... [more]
A0A8H3KSZ9_9GLOM1.980e-932.41Biogenesis of lysosome-related organelles complex ... [more]
A0A1Y1YYF7_9FUNG4.130e-936.99Biogenesis of lysosome-related organelles complex ... [more]
A0A1Y1V8V0_9FUNG1.000e-838.03Biogenesis of lysosome-related organelles complex ... [more]
A0A422P256_TRYRA1.200e-836.25Biogenesis of lysosome-related organelles complex ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..94
NoneNo IPR availableCOILSCoilCoilcoord: 46..66
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
IPR009395Biogenesis of lysosome-related organelles complex 1 subunit 1PFAMPF06320GCN5L1coord: 6..109
e-value: 1.5E-18
score: 67.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2141022..2141523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6745.t1Gvermi6745.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2141022..2141523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6745.t1 ID=Gvermi6745.t1|Name=Gvermi6745.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=117bp
MLSVHLREAERKKNELKQSMTDGADTVQKAALKLSDALLKAINEDIQEVY
QAERQIETELRNVERLLSSNGFQIHQWTNLLDRLTAELKELGDVSNWVEV
LEKSAIEINNISSQLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009395BLOC1S1