Gvermi6738.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6738.t1 vs. uniprot
Match: A0A2V3J3Z8_9FLOR (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Z8_9FLOR) HSP 1 Score: 270 bits (690), Expect = 5.650e-80 Identity = 153/275 (55.64%), Postives = 191/275 (69.45%), Query Frame = 0
Query: 218 LRLGHIDKSADWVVPRAKFVHQPKKERTSPQDKQRQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPPSRPAPARVPV--NEQVA--QQEKPVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVGASVHLFERGYSPAGAPTQHT--DSIEMPPPSGVDAHLYEEDGAEAAVRRSLQKLQIK 486
L+LGHIDKS W+VP K + ++E+ S + Q+QIS VGENLKMLRL++G+RSD+D+KTVMKW+D RAK DRQLYD LQKR GDD+ XXX YEQDRRIGVY+FN DI P RVPV EQ ++EKP+EW LS++S AM FDDQ+Y SD+ +Y D ++F+GQIAE LVDRA L+ VLGAMS+ L ASV L+E GYSP+G T HT D MPPPSGVDAHLY+ GAE+AV++S+QK ++K
Sbjct: 356 LQLGHIDKSHRWMVPPRKNARRMRREKDSRKASQKQISVVGENLKMLRLMIGQRSDEDVKTVMKWMDGRAKTDRQLYDVLQKRPGDDMRKVSEWVXXXXXXXXXXXXXXXXXXYEQDRRIGVYIFNWDIAPRSSTSVRVPVPVTEQQGGLEKEKPIEWLMLSEDSAKAMLRFDDQMYYSDSPTEYADVIHFMGQIAEGLVDRAALLFVLGAMSVGLAVASVSLYEDGYSPSGN-TVHTEVDRANMPPPSGVDAHLYDMGGAESAVQQSVQKARVK 629
BLAST of Gvermi6738.t1 vs. uniprot
Match: R7QSZ3_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSZ3_CHOCR) HSP 1 Score: 207 bits (527), Expect = 3.290e-57 Identity = 127/277 (45.85%), Postives = 175/277 (63.18%), Query Frame = 0
Query: 220 LGHIDKSADWVVP---RAKFVHQPKKERTSPQDKQR------QISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPPSRPAPARVPVNEQVAQQ-----EKPVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVGASVHLFERGYSPAGAPTQHTDSIE--MPPPSGVDAHLYEEDGAEAAVRRSL 480
LGHIDKS DW+VP R K+ K+ +P + R QIS VG+NL+MLRL++ +RSD+D+++VM+WL RA+ADR+L D + RR +D X XXX E+D RIGVY+FN DIP S+ + + PV +V+++ EKP EW +LS+E + + +FDDQL+ + DY +G+YF+GQIAE L DRA L+LVL AM+ L+G S +LF+ GYSP+G TQ +IE M PSGVDA LYEE GAE+ ++ L
Sbjct: 243 LGHIDKSRDWMVPPSSRNKWKRGTKQRAYAPGKRDRDKSNDKQISAVGKNLQMLRLMIERRSDEDVRSVMQWLSGRARADRRLADAISARRENDSRRVTEWXXXXXXXXXXXXXXXXXXXXEKDSRIGVYIFNWDIPLSK-SMSSTPVPVRVSERRGNPVEKPAEWLRLSEEPRMGLQAFDDQLFHRENPTDYGEGIYFMGQIAENLADRAALVLVLSAMTFGLIGVSGYLFDLGYSPSGQSTQTARNIEGAMSKPSGVDAILYEEGGAESVIQSKL 518
BLAST of Gvermi6738.t1 vs. uniprot
Match: UPI001E1E0105 (psbD mRNA maturation factor Nac2, chloroplastic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0105) HSP 1 Score: 163 bits (413), Expect = 6.050e-40 Identity = 108/263 (41.06%), Postives = 159/263 (60.46%), Query Frame = 0
Query: 223 IDKSADWVVPRAKFVHQPKKERTSPQD------KQRQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPP------SRPAPARVPVNEQVAQQE--KPVEWYKLSDESVVAMNSFDDQLYLS----DTAK-DYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVGASVHLFERGYSPAGAPTQHTDSIEMPPPSGVDAHL 466
ID S DW VPR+ P + P ++R++ VGENL+MLR L+ +RSD+D++TVM+W++ RA+ +R L D + XXXXXXX XX D+A+FKE++ DRYE+DR IGVY+FNLDIPP S+ PA+V + + ++ KP EWY L ES ++ FDD LY S DT++ + ++ + FLG++ L R+ L L +++LA+ G ++L GY+P T + + +PPPSGVDA L
Sbjct: 469 IDASNDWAVPRSSGPQAPHQRVRKPASSLARGKERRKLLQVGENLQMLRRLIERRSDEDLRTVMQWIERRAREERDLKDKVAAXXXXXXXXXXXXXXXXGEADVAAFKEFIEDRYEKDRLIGVYLFNLDIPPLVKKLGSKAMPAQVVASPEAGDEQAPKPQEWYVLEGESGRSLEEFDDLLYRSEGWVDTSRIEILEAIEFLGKVGSGLATRSALAFALCSLTLAITGMFIYLEYEGYTPRSLDTSSAEVV-LPPPSGVDAAL 730
BLAST of Gvermi6738.t1 vs. uniprot
Match: A0A1X6PFM5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFM5_PORUM) HSP 1 Score: 158 bits (399), Expect = 9.440e-39 Identity = 92/223 (41.26%), Postives = 130/223 (58.30%), Query Frame = 0
Query: 248 QDKQRQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPPSRPAPARVPVNEQVAQQEKPVEWYKLSDE-SVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVGASVHLFERGYSPAGAPTQHTDSIEMPPPSGVDAHLYEE 469
+D Q+S + NL+ML+ LVG+R+D+D +T++ WLD+RA+AD L+ L +R D A A D+ +F +W+A RYE+DRRIGVYVF LDIP S PA PV A EKPVEW +L + S + + FD++LY +T ++ V M +LG +AE L +RA L L +SL +V AS+HL P P + P GVDA L ++
Sbjct: 344 EDHATQLSNISTNLRMLKKLVGQRTDEDTRTLLAWLDSRAQADASLFTRLSRRGEADSQKLMQWAARRSANDVNAFSDWVARRYEEDRRIGVYVFGLDIPRSARKPATTPVKVGAAVVEKPVEWLRLKEAPSRMTLAEFDERLYTEETTREAVWVMVWLGNLAESLANRAALTSALAGISLLVVAASLHLMAVTEVPERPP-----QAAVRPAEGVDAKLIQQ 561
BLAST of Gvermi6738.t1 vs. uniprot
Match: A0A5J4YYQ5_PORPP (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYQ5_PORPP) HSP 1 Score: 111 bits (277), Expect = 2.700e-22 Identity = 84/251 (33.47%), Postives = 125/251 (49.80%), Query Frame = 0
Query: 222 HIDKSADWVVPRAKFVHQPKKERTSPQDKQRQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPPSRPAPARV--PVNEQVAQQEKPVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVG--ASVHLFERGYSPAGAPTQHTDSIEMPPPSGVDAHLYE 468
HID S +W P F+ + K + Q+ ENL MLR L+ +R+ DD++ V+ WL+ + + D LY ++ + D XX XX DI +F+ W YEQDRRIG Y+F D P R+ P + +A + P+EWY+L D+ ++ DD+ Y +D A +Y FLG A L +R + L M + L+G + L++ + A +P H D PSGVDA L E
Sbjct: 383 HIDSSREWTAP---FLPEKKVRKG-------QLKRSAENLVMLRRLIERRTGDDVRAVLTWLNRKVEGDLSLYKKIKAKGEGDASKLLEXXXXXSKQDIEAFESWFDKWYEQDRRIGAYIFGWDFP------KRILDPPDSGLASVKAPIEWYRLKDKPRCTLSEADDEFY-NDEAVEYTLIAEFLGSFAANLANRVGVTFALLGMCVLLLGYGSQSGLYDMTLT-APSPLVHLDR-----PSGVDAALME 610
BLAST of Gvermi6738.t1 vs. uniprot
Match: A0A7S1TEB4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEB4_9RHOD) HSP 1 Score: 108 bits (269), Expect = 1.820e-21 Identity = 82/264 (31.06%), Postives = 126/264 (47.73%), Query Frame = 0
Query: 218 LRLGHIDKS-ADWVV---PRAK-FVHQPKKERTSPQDKQRQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPPSRPAPARVPVNEQVAQQEKPVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVGASVHLFERGYSPAGAPTQHTDSIEMPPPSGVDAHLYE-EDGAEAA 475
LRLGHID S +DW + P AK + + +K R ++ + E L MLR LV ++SD D++ V+ WL +A D+ + + ++ D A D+ +F+ W RY++DRRI Y+F ++P + P P EW L + ++ D+ + +D DY + +YFLG A+ L RA L L ++ L+ SV G AP + D+ + PSGVDAHL E D E+A
Sbjct: 310 LRLGHIDDSFSDWKLGFEPHAKGYGGRSRKSREKKEE-------LAEKLSMLRRLVERKSDKDVRLVLLWLQKQAVKDKDRHRQISEKGNTDSINVLHWAKNRSAEDVHAFQNWFDSRYKKDRRIAAYLFGWNLPTTSPVPP---------------EWTTLDIGGLRTLSEGDEDIVRNDNPMDYGEFVYFLGSFADGLASRAALTAALSGLTAILLMVSV---GAGLFDVAAPF-NPDNQSVQAPSGVDAHLVELHDSDESA 547
BLAST of Gvermi6738.t1 vs. uniprot
Match: M1VKX9_CYAM1 (Similar to psbB mRNA maturation factor Mbb1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VKX9_CYAM1) HSP 1 Score: 84.0 bits (206), Expect = 1.900e-13 Identity = 71/257 (27.63%), Postives = 114/257 (44.36%), Query Frame = 0
Query: 219 RLGHIDKSADWVVPRAKFVHQPKKERTSPQDKQRQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDI-PPSRPAPARVPVNEQVAQQEK----PVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLM-LVLGAMSLALVGASVHLFERG-YSPAGAPTQHTDSIEMPPPSGVDAHLYE 468
RLGHI + +W V R+ R+ P+ ++R+ T+GE L MLR L+ +RS++D++TV+ ++ R + DRQ + +R DDL X R +G YVF ++ PP R P E + P EW + + ++ ++ +LY + V M ++ AE L RA + L+LG M VG + H++E G Y + + P GVDA L +
Sbjct: 452 RLGHISPAPEWNVYRS--------NRSDPETRERRRETIGERLLMLRKLIDRRSEEDLRTVLTFIAERTRMDRQARAAITERSRDDLDRVRRWAERRXXXXXXXXXXXXXXXXXXXRLVGQYVFGWNLGPPLRSTVVSSPSTENTGGGDSASAVPPEWLRAAP-MPRPLSEYEKELYSGERELQLVPAMAWISSFAENLSSRAAISTLLLGLMMFLSVGFA-HIYELGRYEIGNVESTLLQILSTRVPEGVDAALID 698
BLAST of Gvermi6738.t1 vs. uniprot
Match: A0A7S1TM86_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TM86_9RHOD) HSP 1 Score: 80.1 bits (196), Expect = 3.220e-12 Identity = 70/222 (31.53%), Postives = 96/222 (43.24%), Query Frame = 0
Query: 252 RQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPP---SRPAPARVPVNEQVAQQEKPVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVGASVH--LFERGYSPAGAPTQHTDSIEMPPPSGVDAHLYE 468
RQ++ E L M+R LV ++S DD + V+ WL R DR G D+ +F W A YE+DRRI Y+F DIPP + + + + + E P EWY L + + DD+L+ +D A Y F G A L +RA L L S+ L+ H LF+ P+ P T P GVDAHL E
Sbjct: 505 RQLARYAERLSMVRRLVERKSADDARMVLTWL-ARNTVDRG-------ELGAQAATLLEWTQRRSKQDVEAFTAWFAQWYEKDRRIVSYIFGWDIPPPAWEQDSQVAGAADAKSSAIEVPAEWYTLEEFPRKTLRDADDELF-NDDAVGYSVLAEFFGTFASNLANRAALSCALLGFSVLLLAMVSHHGLFDL---PSDVPLPSTFDA----PHGVDAHLIE 710
BLAST of Gvermi6738.t1 vs. uniprot
Match: A0A7J7IN41_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IN41_9RHOD) HSP 1 Score: 62.4 bits (150), Expect = 3.400e-7 Identity = 59/251 (23.51%), Postives = 98/251 (39.04%), Query Frame = 0
Query: 219 RLGHIDKSADWVVPRAKFVHQPKKERTSPQDKQRQISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPPSRPAPARVPVNEQVAQQEKPVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMYFLGQIAERLVDRAVLMLVLGAMSLALVGASVHLFERGYSPAG-APTQHTDSIEMPPPSGVDAHLYE 468
RLGHI + +W V R + + ++R+ +T+GE L MLR LV +RS++D++ V+ ++ R DR+ + +R +DL XX R +G YVF ++ +LY S+ + + ++ AE L RA L +L + +AL H++E G + G + + P P GVDAHL +
Sbjct: 55 RLGHISPAPEWNVYRG--------SQRDTKARERRRATIGERLVMLRKLVDRRSEEDLRAVLAFIAERTLIDRRARAAMSERSREDLERLRRWAERXXXXXXXXXXXXXXXXXXXXRLVGHYVFGWNL-----------------------------------------ELYSSERELHLLPAVAWISSFAENLSSRAALSTLLIGLLMALSAGFTHIYELGRNEIGNVESALLQILSTPAPQGVDAHLID 256
BLAST of Gvermi6738.t1 vs. uniprot
Match: A0A7S0G6G5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6G5_9RHOD) HSP 1 Score: 60.1 bits (144), Expect = 5.040e-6 Identity = 67/221 (30.32%), Postives = 107/221 (48.42%), Query Frame = 0
Query: 254 ISTVGENLKMLRLLVGKRSDDDMKTVMKWLDTRAKADRQLYDTLQKRRGDDLXXXXXXXAXXXATDIASFKEWLADRYEQDRRIGVYVFNLDIPPSRPAPARVPVNEQVAQQEKPVEWYKLSDESVVAMNSFDDQLYLSDTAKDYVDGMY-FLGQIAERLVDRAVLMLVLGAMSLALVGAS--VHLFERGYSPAGAP-TQHTD-SIEMPPPSGVDAHLYEE 469
+ +GE L+ML L+ +S D++ V+ W+ RA+ D+++Y + +R G+D XXXXXX XXX IG Y+F IP R R + Q++ P EWY L + V + F+D+ TA + + ++ +++ +RA A+S A+ G S V + GY + TD ++++ PPSGVDAHL E
Sbjct: 221 LKGLGERLRMLGNLIEGKSSSDIRAVLVWIQRRAEEDKEIYKRILRRGGNDRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGSYIFGWHIP-KRKRRRRT----RGRQRKVPTEWYILEE---VPIPVFEDEYVDPHTAALNIQPITKWVDSFSDKAGNRA-------ALSSAIAGLSIVVLVMTNGYGLIDLKMSSSTDQTVQVSPPSGVDAHLIRE 426 The following BLAST results are available for this feature:
BLAST of Gvermi6738.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6738.t1 ID=Gvermi6738.t1|Name=Gvermi6738.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=487bpback to top |