Gvermi6726.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6726.t1
Unique NameGvermi6726.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length265
Homology
BLAST of Gvermi6726.t1 vs. uniprot
Match: A0A2V3J3M2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3M2_9FLOR)

HSP 1 Score: 314 bits (805), Expect = 4.010e-105
Identity = 172/282 (60.99%), Postives = 206/282 (73.05%), Query Frame = 0
Query:    1 MLVMFGTMYALRKVDQEEPIVLFYARLAFVAYILVVTSLYALLHWRITSRCDLTPVTVPLKSKSPSFWETMEQAQKVAEKKAETSXXXXXXXXXXXXXXXNEEDKQEQSNNEEPKTE------------------TITVMEYDLRTLAGARKSWVMNCLILAAINYKTESVSAIVMSPLMTIMKLVTEDPLFLIHLCGAPSVEKLKRPFAAPESPFAAMFKEMAPKDLSQAHQAKNDKPIVEELHGESESEEEDSGPTRLTDLGDDHIKGDFDEEEEPKKTK 264
            MLVM GTMY LRKVDQEEP+VL YARLAFVAY++VVTSLY+LLHWRITSRCDL+PVTVPL +K+PSF E M+Q +K AE                          ++Q  + E KTE                  TIT MEYDLRTL+ AR+SWVMNCLILAA+NYKTESVSAIV+SPLMT+++ VTEDPLFLIH+ G+P+V+KLKRPF   ESPFA + KEMAPK+ ++  + K DK  VE+LH + ESEEED+GPTRLT+L DDHIK DFDE++EPKKTK
Sbjct:    6 MLVMVGTMYMLRKVDQEEPVVLLYARLAFVAYLIVVTSLYSLLHWRITSRCDLSPVTVPLNAKAPSFQEAMDQMKKAAE--------------------------EQQPQSSEAKTESEXXXXXXXXXXXXXXXXTITTMEYDLRTLSSARRSWVMNCLILAAVNYKTESVSAIVISPLMTLLRFVTEDPLFLIHVAGSPAVDKLKRPFTPSESPFATLLKEMAPKEPTEDQKKKKDKQPVEDLHDDGESEEEDNGPTRLTELKDDHIKSDFDEDDEPKKTK 261          
BLAST of Gvermi6726.t1 vs. uniprot
Match: A0A5J4YJI0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJI0_PORPP)

HSP 1 Score: 70.9 bits (172), Expect = 9.170e-11
Identity = 60/201 (29.85%), Postives = 101/201 (50.25%), Query Frame = 0
Query:    1 MLVMFGTMYALRKVDQEEPIVLFYARLAFVAYILVVTSLYALLHWRITSRCDLTPVTVPLKSKSPSFWETMEQAQKVAEKKAETSXXXXXXXXXXXXXXXNEEDKQEQSNNEEPKTETITVMEYDLRTLAGARKSWVMNCLILAAINYKTESVSAIVMSPLMTIMKLVTEDPLFLIHLCGAPSVEKLKRPFAAPESPFAAM 201
            M+++ G M  ++ +DQE+P  L   R  ++ Y L++ + +  LH  +T + D   + VP+ +     W    QAQ  A                  XXXX +  +        P+ E  TV +YD+  L   RK+ + N  ++A +++K  SVS +V+S +M I+K V+++ LF +H+ GA    KL+RPF    +P  AM
Sbjct:   11 MVIVLGVMSYMKNLDQEDPKTLLLCRGVYLVYALLMLAYHLYLHTVVTKKNDQRKIKVPVVANP---WS---QAQAQAX-----------------XXXXXDXXRXXXXXXASPEEEEKTVRDYDMGILVAQRKALLTNMAMMAFVHFKMGSVSPLVVSSVMGILK-VSDEHLFKLHVLGAAEEGKLERPFPTEPNPLMAM 187          
BLAST of Gvermi6726.t1 vs. uniprot
Match: A0A7S2AXH8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXH8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.020e-8
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0
Query:  105 KQEQSNNEEPKTETITVMEYDLRTLAGARKSWVMNCLILAAINYKTESVSAIVMSPLMTIMKLVTEDPLFLIHLCGAPSVEKLKRPFAAPESPFAAM 201
            +++    EE KT  +T  EYD + +  A KS +    I   I+YK  + S ++   +M  M L  +D LF IH+ G  +V KLKRPF APESPFAA+
Sbjct:   82 EKKMDGTEEEKT--MTTREYDAQQIMSAFKSSLFGLCITCGIHYKWGNASPLLFQAIMLPMGLF-DDNLFKIHVLGNEAVGKLKRPFKAPESPFAAL 175          
The following BLAST results are available for this feature:
BLAST of Gvermi6726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3M2_9FLOR4.010e-10560.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4YJI0_PORPP9.170e-1129.85Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2AXH8_9STRA9.020e-841.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012098SRP-independent targeting protein 3PFAMPF10032Pho88coord: 95..217
e-value: 4.9E-16
score: 58.5
coord: 1..67
e-value: 1.0E-8
score: 34.7
IPR012098SRP-independent targeting protein 3PANTHERPTHR28112SRP-INDEPENDENT TARGETING PROTEIN 3coord: 102..220
coord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..264
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2101333..2102127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6726.t1Gvermi6726.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2101333..2102127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6726.t1 ID=Gvermi6726.t1|Name=Gvermi6726.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=265bp
MLVMFGTMYALRKVDQEEPIVLFYARLAFVAYILVVTSLYALLHWRITSR
CDLTPVTVPLKSKSPSFWETMEQAQKVAEKKAETSETTETTEVKDDKPSK
NEEDKQEQSNNEEPKTETITVMEYDLRTLAGARKSWVMNCLILAAINYKT
ESVSAIVMSPLMTIMKLVTEDPLFLIHLCGAPSVEKLKRPFAAPESPFAA
MFKEMAPKDLSQAHQAKNDKPIVEELHGESESEEEDSGPTRLTDLGDDHI
KGDFDEEEEPKKTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012098SND3_fun