Gvermi6723.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6723.t1
Unique NameGvermi6723.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length182
Homology
BLAST of Gvermi6723.t1 vs. uniprot
Match: A0A2V3J4F9_9FLOR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F9_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 5.530e-58
Identity = 95/165 (57.58%), Postives = 115/165 (69.70%), Query Frame = 0
Query:   16 RLFCSKSGAQGPPDLFPRRPERKPFDSLGYELIDTTTEPQGAQRAVID-SIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAYTESKA 179
            RLF SK G Q  P   P    + PFDSLGYELID+               +G  SFT+SGVRV GSVL+MP FSTIWNVDH  ++ P S AL+KL++PRPDI+++GTG+   PL   +  FFK+I+VNVE MDTKNA HTFNVLNQEDRNVAAAL PV+Y  +K+
Sbjct:   15 RLFSSKPGPQSSPAQ-PESGRKTPFDSLGYELIDSXXXXXXXXXXXXXXGLGPNSFTVSGVRVAGSVLVMPFFSTIWNVDHFERITPSSLALVKLVVPRPDILVLGTGATLLPLPPGLKEFFKDIKVNVETMDTKNASHTFNVLNQEDRNVAAALLPVSYEGNKS 178          
BLAST of Gvermi6723.t1 vs. uniprot
Match: A0A7S1TG55_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TG55_9RHOD)

HSP 1 Score: 93.2 bits (230), Expect = 2.750e-21
Identity = 39/111 (35.14%), Postives = 66/111 (59.46%), Query Frame = 0
Query:   59 RAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAAL 169
            R  I   G   F I   R+ GS+L+ P     WNV  ++++ P S  +++  IP+P I+++GTG  +  +  +  ++ + +++N E +DT  AC TFN+LN+E R+VAA L
Sbjct:    3 RVAISKYGKSFFVIGDDRIPGSILLFPHLVMHWNVSAVKEITPESLTILEYFIPKPRILVIGTGFYARSVPQETRDYLRSLQINSEVLDTPRACSTFNILNEERRDVAAVL 113          
BLAST of Gvermi6723.t1 vs. uniprot
Match: A0A6J0TYJ4_9SAUR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0TYJ4_9SAUR)

HSP 1 Score: 93.6 bits (231), Expect = 8.250e-21
Identity = 63/175 (36.00%), Postives = 87/175 (49.71%), Query Frame = 0
Query:    7 LRLLHGERRRLFCSKSGAQGPPDLFPRRPER-KPFDSLGYELIDTTT----EPQGAQRAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAYTE 176
            LRLL G R            P D  P+R  R  P D    EL   TT    E +  Q   +++  +G FTISG +V G  +I P     WNV     +   S  L +L+ PR +I+++GTG+ +  L   V+ F ++  V VE  DT NAC T+N L  E R+ AAAL P ++ E
Sbjct:    4 LRLL-GRRFAAVLPPRAFYAPSDRQPKRGHRLTPSDD---ELYQQTTVQLLEKESNQIMFLETYSSGGFTISGCKVIGPCVIFPRAILQWNVGTHMDITAESLTLFRLLEPRIEILVLGTGTKTERLDPAVLKFMRQCGVAVEVQDTPNACATYNFLISERRSTAAALIPPSHHE 174          
BLAST of Gvermi6723.t1 vs. uniprot
Match: L8GNY7_ACACA (Nuclear protein E33 isoform a isoform 3, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GNY7_ACACA)

HSP 1 Score: 89.4 bits (220), Expect = 7.780e-20
Identity = 43/114 (37.72%), Postives = 70/114 (61.40%), Query Frame = 0
Query:   61 VIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAY 174
            ++D      F+I+GV + G + ++P+    WNV  + ++ P S AL   I PR  I+++G G     ++  + +FF++  +++EA+DT NA  T+N+LNQEDR VAAAL P  Y
Sbjct:    1 MVDGYSGSRFSINGVLLPGPLFLLPTLPLAWNVTSLDELSPESLALAYAIRPRVSILILGCGQRIKMINPQLRDFFRQKGISIEALDTWNAVATWNILNQEDRAVAAALMPFDY 114          
BLAST of Gvermi6723.t1 vs. uniprot
Match: A0A1D1YFX7_9ARAE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YFX7_9ARAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.840e-19
Identity = 45/129 (34.88%), Postives = 77/129 (59.69%), Query Frame = 0
Query:   47 LIDTTTEPQGAQRAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAYT 175
            LID+  E Q   +A  D+     FT++GV+  GS+LI+ +  T W+     ++   S ++++L+ P P+I+++G G    P+S  +  F +   + +EA+D++NA  T+N+LN+E R VAAAL P   T
Sbjct:   50 LIDSVPEDQLRFQAYSDT----GFTVNGVKYEGSLLIVGNLLTSWSPKRFSEITADSLSMLQLVRPTPEILILGCGRHIQPVSPQLRQFIRSTGMKLEALDSRNASSTYNILNEEGRIVAAALLPYGVT 174          
BLAST of Gvermi6723.t1 vs. uniprot
Match: A0A6J0TS30_9SAUR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0TS30_9SAUR)

HSP 1 Score: 90.1 bits (222), Expect = 2.070e-19
Identity = 56/153 (36.60%), Postives = 80/153 (52.29%), Query Frame = 0
Query:   29 DLFPRRPER-KPFDSLGYELIDTTT----EPQGAQRAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAYTE 176
            D  P+R  R  P D    EL   TT    E +  Q   +++  +G FTISG +V G  +I P     WNV     +   S  L +L+ PR +I+++GTG+ +  L   V+ F ++  V VE  DT NAC T+N L  E R+ AAAL P ++ E
Sbjct:   31 DRQPKRGHRLTPSDD---ELYQQTTVQLLEKESNQIMFLETYSSGGFTISGCKVIGPCVIFPRAILQWNVGTHMDITAESLTLFRLLEPRIEILVLGTGTKTERLDPAVLKFMRQCGVAVEVQDTPNACATYNFLISERRSTAAALIPPSHHE 180          
BLAST of Gvermi6723.t1 vs. uniprot
Match: A0A8C5QJU9_9ANUR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QJU9_9ANUR)

HSP 1 Score: 90.1 bits (222), Expect = 3.200e-19
Identity = 58/154 (37.66%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   30 LFPRRPERK----PFDSLGYELIDTTT-EPQGAQRAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAYTESK 178
            L+ R+P R     P D   Y+    T  E   A    I+S  +  F I+G RV G   ++P     WNV   + +   S AL  +I+P+ +I++VGTG     L   ++   +E  V VE  DT NAC TFNVL  E R  AAAL P   TESK
Sbjct:   37 LYTRQPSRSHRLSPSDDELYQKTTVTRLERDSADIMFIESYSSQGFIINGDRVVGPCAVVPKAILQWNVGSYKDISMESLALFHMIVPKIEILVVGTGDRVERLHPSILKAMREKGVAVEVQDTGNACATFNVLTSERRVTAAALIPP--TESK 188          
BLAST of Gvermi6723.t1 vs. uniprot
Match: D7FV73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV73_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.640e-18
Identity = 61/187 (32.62%), Postives = 92/187 (49.20%), Query Frame = 0
Query:   17 LFCSKSGAQ-----------GPPDL---FPRRPERKPFDS------LGYELIDTTTEPQGAQRAVIDSIGTGSFTIS-GVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGS-VSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAYTESKAQS 181
            LFCS+ G             GPP     F RR  +KP D+       G++L++   +P   ++ VI       F +  GV V GS++ MP+   +W       +   S  +++L+IP+ D+++VG G  ++  L   ++       + VE MDT NAC TFNVLN EDR VAAAL  ++  E    S
Sbjct:   29 LFCSRRGMSSARGGKGSNTAGPPGTIKGFGRR--QKPVDAGNTALGKGFDLMED--DPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRMVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEESILS 211          
BLAST of Gvermi6723.t1 vs. uniprot
Match: A0A482SEF2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEF2_9ARCH)

HSP 1 Score: 86.3 bits (212), Expect = 4.410e-18
Identity = 48/134 (35.82%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   40 FDSLGYELIDTTTEPQGAQRAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGS-VSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPV 172
            FD LG E++  T +    QR  I ++G  SF I+ V V  SVL+ P+    W+   +  +   +  +  L+ P  +I+ VG G  ++    +++   F++  + +EA DTKNA  TFNVLN E RNVAAAL  +
Sbjct:   26 FDILGSEVVGETDQ----QRTAIQALGDHSFLINNVLVKQSVLVFPNSFLAWSAKSMADLTVENLEVFTLLYPTVEILFVGCGEKMTQRFPAEIQERFRKSGIVIEATDTKNAAATFNVLNAEGRNVAAALLTI 155          
BLAST of Gvermi6723.t1 vs. uniprot
Match: K8Z3H4_NANGC (Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3H4_NANGC)

HSP 1 Score: 87.4 bits (215), Expect = 4.440e-18
Identity = 52/154 (33.77%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   33 RRPERKPFDSLGYE---LIDTTTEPQGAQRAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVCPGSFALIKLIIPRPDIVLVGTGS--VSHPLSSDVMNFFKEIRVNVEAMDTKNACHTFNVLNQEDRNVAAALFPVAYTESKAQS 181
            RR + + F  LG     L     E  G +R  +       F +  V   GS+L +P+   +W    I ++ P S A + ++ P  +I+++GTG   V   L+   + F     V VE MDT +AC TFN+LNQEDR VAAAL  V     +++S
Sbjct:   58 RRQQSRAFSDLGKGIDVLAVGNEEEAGRERTFLLGYDGQGFEVRDVNYRGSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGRALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAAEESES 211          
The following BLAST results are available for this feature:
BLAST of Gvermi6723.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4F9_9FLOR5.530e-5857.58NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S1TG55_9RHOD2.750e-2135.14NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A6J0TYJ4_9SAUR8.250e-2136.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
L8GNY7_ACACA7.780e-2037.72Nuclear protein E33 isoform a isoform 3, putative ... [more]
A0A1D1YFX7_9ARAE1.840e-1934.88NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A6J0TS30_9SAUR2.070e-1936.60NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A8C5QJU9_9ANUR3.200e-1937.66NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
D7FV73_ECTSI1.640e-1832.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A482SEF2_9ARCH4.410e-1835.82Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
K8Z3H4_NANGC4.440e-1833.77Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 62..169
e-value: 6.6E-30
score: 103.3
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 41..178
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 57..174
e-value: 1.6E-34
score: 120.1
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 53..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2094945..2095578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6723.t1Gvermi6723.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2094945..2095578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6723.t1 ID=Gvermi6723.t1|Name=Gvermi6723.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=182bp
MKTAGLLRLLHGERRRLFCSKSGAQGPPDLFPRRPERKPFDSLGYELIDT
TTEPQGAQRAVIDSIGTGSFTISGVRVYGSVLIMPSFSTIWNVDHIRQVC
PGSFALIKLIIPRPDIVLVGTGSVSHPLSSDVMNFFKEIRVNVEAMDTKN
ACHTFNVLNQEDRNVAAALFPVAYTESKAQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007523NDUFAF3/AAMDC
IPR036748MTH938-like_sf