Gvermi6717.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6717.t1
Unique NameGvermi6717.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length246
Homology
BLAST of Gvermi6717.t1 vs. uniprot
Match: A0A2V3J3N1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3N1_9FLOR)

HSP 1 Score: 343 bits (881), Expect = 2.980e-117
Identity = 158/233 (67.81%), Postives = 198/233 (84.98%), Query Frame = 0
Query:    1 MNCIRADPSFASLGLVFGLVLAGMTPPPSALINFYLKFRELLQEGLKYAQVPESSCYMYEPDMIHTTIATFRSFLRPPPSNPELFVSEWKGLLLRASRRSGWPQPGTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIRAEMRENKSQTSLRYIECIRGDVKIPNIIHSTILRWRRSPDISVARLQNIFSEAFVLTKATEHPVDIPLTTVSLLREWRPYMMAKTCVVQLW 233
            MN I+ DPS A++GLVFGLVL GM+PPP ++++FY KF  LLQEGL+ A V ES+CY+Y+ DM+HTT+ATFRSF++PPP +PEL+VSEWKG+LLRASRR+ WP PGTYVL+L EAKVQ+NGVGT L+ D+LRV++RMRECIR EM E +S+ SL YI C   D++IPNIIHST+LRWR++P++SV  LQNIFSEAF+LTKA  +  ++PLTTVSLLREW+PYM AKTCV QLW
Sbjct:    1 MNYIQPDPSCANIGLVFGLVLCGMSPPPMSMLSFYKKFSALLQEGLRNAGVHESACYLYDADMLHTTLATFRSFIKPPPRSPELYVSEWKGILLRASRRAEWPAPGTYVLSLQEAKVQDNGVGTLLFTDKLRVIERMRECIREEMSEARSKDSLYYIRCTNADIRIPNIIHSTVLRWRKAPNLSVFELQNIFSEAFILTKAAGYSTEMPLTTVSLLREWKPYMRAKTCVAQLW 233          
BLAST of Gvermi6717.t1 vs. uniprot
Match: A0A7S4JDV9_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JDV9_GUITH)

HSP 1 Score: 67.0 bits (162), Expect = 1.540e-9
Identity = 47/170 (27.65%), Postives = 79/170 (46.47%), Query Frame = 0
Query:   57 YMYEPDMIHTTIATFRSFLRPPPSNPEL---FVSEWKGLLLRASRRSGWPQPGTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIRAEMRENKSQTSLRYIECIRGDVKIPNIIHSTILRWRRSPDISVARLQNIFSEAFVLTKATEHPVDIPLTTVSLLREWRPYM 223
            Y+Y    +HTT+ T  SF RPP  + EL   +++ W  L+  A     WP+ G   L   EA    + V   +Y D  + ++ +R  ++ E      Q   + I+        P I+HSTILRWR +PD   ++++  F ++ +        + +    + L+ E  PYM
Sbjct:   89 YVYPFSTLHTTLLTCYSFTRPPLGSQELKEEYLNGWNQLIEHAMSHPEWPR-GKIKLRCKEAVAYPDAV-VLMYDDVDKAIENIRRILKEEAENKLPQMGYKNIDV--SLAHFPTIMHSTILRWRDTPDCKFSQVKECF-DSIMRKNWPSEGLAVSAEKMHLVVEKVPYM 253          
BLAST of Gvermi6717.t1 vs. uniprot
Match: B7G0B5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0B5_PHATC)

HSP 1 Score: 66.6 bits (161), Expect = 4.100e-9
Identity = 60/239 (25.10%), Postives = 106/239 (44.35%), Query Frame = 0
Query:    2 NCIRADPSFASLG-------LVFGLVLAGMTPPPSALINFYLKFRELLQEGLKYAQVPESSC--YMYEPDMIHTTIATFRSFLRPPPSNPELFVSEWKGLLLRASRRSGWPQPGTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIRAE--------MRENKSQTSLRYIECIRGDVKIPNIIHSTILRWRRSPDISVARLQNIFSEAFVLTKATEHPVDIPLTTVSLLREWRPYM 223
            N  ++DP  ASL          FGLV     PP  ++   Y  F   ++   +   V  S+   Y+Y  + +H T+ATF         + E+     K +++ A+  + WP+     L +  A++ ++  G  L+ +    +D +RECIR          +  + S   L  ++ +   + IP I+HST LR+ ++P      +Q  F E  V      +P  +   +V+L+ E+ PYM
Sbjct:  126 NRFQSDPLLASLVEKSNLHVTSFGLVCVAGWPPCESMRKSYKNFVLAVRGCFEDNDVQGSTAPVYIYPFESLHVTVATFSRTSFKNLEHQEVRTEYAKKVVMAAAEDANWPKH-PLELQIDNAQIGDHA-GILLWKETTGRLDMLRECIRKASSMVLKEVVSADISAAQLHAMQDMLRGITIPPIVHSTFLRFYKTPVSPARMVQEKFCERVVKRLLDLYPKTLSALSVALVCEYSPYM 362          
BLAST of Gvermi6717.t1 vs. uniprot
Match: A0A7S4VQQ7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VQQ7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.810e-9
Identity = 63/239 (26.36%), Postives = 103/239 (43.10%), Query Frame = 0
Query:   14 GLVFGLVLAGMTPPPSALI----NFYLKF-------RELLQEGLKYAQVPES-------SCYMYEPDMIHTTIATFRSFLR--PPPSNPELFVSEWKGLLLRASRRSGWPQP----GTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIRAEMRENKSQT-SLRYIECIRGDVKIPNIIHSTILRWRRSPDISVARLQNIFSEAFV--LTKATEHPVDIPLTT--VSLLREWRPYM 223
            G  FGL+   + PPP  ++    N +L         +++L +    A+   S       + YMY P+ +H TI+TF  F +     S   + + +W+ +L+ AS+R  WP            +  A++     G  L+ +    +  MR CI    RE  S+  SL  +      + IPNI+HST LR+   P      +Q  FS   +  L        D+ + T  + ++ EW PYM
Sbjct:   67 GSEFGLLAVTLWPPPLDILREPYNTFLSCVRDCFDKQDILAQPHDVAKDSSSGIGPAAAAVYMYPPECLHVTISTFHPFTKRTTDKSKQAVLMEQWRDILIHASQRPEWPSSRNNKNKLKFRICGAQIGQKA-GILLWEELTGALHDMRNCI---SRETASRVDSLAKVGIDANTLMIPNIVHSTFLRFHHVPISKCEGVQAKFSNLVLPHLFSDDMFGSDLVVETDQIRMVCEWTPYM 301          
BLAST of Gvermi6717.t1 vs. uniprot
Match: A0A1Q9ETY8_SYMMI (Fibronectin type-III domain-containing protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9ETY8_SYMMI)

HSP 1 Score: 65.1 bits (157), Expect = 1.720e-8
Identity = 64/221 (28.96%), Postives = 91/221 (41.18%), Query Frame = 0
Query:   16 VFGLVLAGMTPPPSALINFYLKFRELLQEGLKYAQVPESSCYMYEPDMIHTTIATFRSFL--RPPPSNPELFVSEWKGLLLRASRRSGWPQPGTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIRA-------EMRENKSQTSLRYIECIRGDVK----IPNIIHSTILRWRRSPDISVARLQNIFSEAFVLTKATEHPVDIPLTTVSLLREWRPYM 223
            + GLV+    P P  ++  Y  FRE L      A +P+ + Y+Y    +H TI T R+F   R   S  +     W  +L  A R  GWP  G   L +    ++ +  G F Y D    +  MR+ +RA       E  E     S         + +    IP+I+HST+LRW   P    A       EAF     +  PV+I  T    + E  PYM
Sbjct:  324 ICGLVVVCSWPMPQPVLEQYELFREKLA-----AAMPKEA-YVYPGTTLHCTICTLRAFTSGRMESSEKQRSSESWSKILDAARRDPGWPT-GPVALKMGRPTLEGSA-GIFRYEDTAGTIAAMRKALRAAIIAAGGEPAEGGGDRSKAKPPSGTPEGEPAPHIPDIVHSTVLRWTAEPADRAAA-----QEAFAQVAESWEPVEIIATAPRAVFEDIPYM 531          
BLAST of Gvermi6717.t1 vs. uniprot
Match: A0A0M0J9H0_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9H0_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 1.670e-6
Identity = 65/222 (29.28%), Postives = 94/222 (42.34%), Query Frame = 0
Query:   16 VFGLVLAGMTPPPSALINFYLKFRELLQEGLKYAQVPESSCYMYEPDMIHTTIATFRSFLRPP--PSNPELFVSEWKGLLLRASRRSGWP-QPGTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIRAEMR-------ENKSQTSLR--YIECIRGDVK--IPNIIHSTILRWRRSPDISVARLQNIFSEAFVLTKATEHPVDIPLTTVSLLREWRPYM 223
            V GLVL    P PS + +      E L+     A++P ++ Y+Y P  +H TIAT R+F       S  E  V+ W+ +L +A     WP QP   V    EA       G   Y D    +  MR  +R  +        E     SL         G+V   IP+I+HST++RW   PD   A      +EAF     +  P+++ +     + E  PYM
Sbjct:   23 VCGLVLVCAWPMPSDVQSQAGSLCEKLR-----AELP-AAAYVYPPSTLHCTIATLRAFTHGAMDSSAVEACVALWEPVLAKAKASPTWPTQP---VRLRMEAPTLEGAAGILRYADLDGAIAAMRAALRDAIVAAGGVAVEGGGDRSLGTPLNGAPEGEVPPHIPDIVHSTLVRWTAEPDDRAAA-----AEAFARVAQSWTPLELTVPRAIAVFERLPYM 230          
BLAST of Gvermi6717.t1 vs. uniprot
Match: A0A813F1A1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F1A1_POLGL)

HSP 1 Score: 55.8 bits (133), Expect = 7.490e-6
Identity = 55/213 (25.82%), Postives = 89/213 (41.78%), Query Frame = 0
Query:   35 YLKFRELLQEGLKYAQVPESSCYMYEPDMIHTTIATFRSFLRPP--PSNPELFVSEWKGLLLRASRRSGWPQPGTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIR----------AEMRENKSQTSLRYIECIRGDVK--IPNIIHSTILRWRRSPDISVARLQNIFSEAFVLTKATEHPVDIPLTTVSLLREWRPYMMAKTCVVQLW 233
            Y  FR  LQE +       +  Y+Y    +H T+ T R+F   P   +  +L    W  +L  A     WP   +  L++    ++ +  G F + D    V +MR C+R          AE   ++S  +        GD    +P+I+HST+LRW  +P+ +VA       EAF    A+  P+ + +     + E  PYM        +W
Sbjct:    2 YDDFRAKLQEAMP------AEAYVYPASTLHCTVCTLRAFTGGPMDAAARQLAQDLWSPVLSAARENEEWP--ASCRLSMGRPTLEGSA-GIFRFEDLDGSVAKMRSCLREAILAAGGSAAEGAGDRS-AARALPGSPEGDPAPHLPDIVHSTVLRWTAAPEDAVAA-----REAFERIAASWEPLQVAVPFARWVFEDTPYMHIPDDPAHIW 199          
The following BLAST results are available for this feature:
BLAST of Gvermi6717.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J3N1_9FLOR2.980e-11767.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S4JDV9_GUITH1.540e-927.65Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
B7G0B5_PHATC4.100e-925.10Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S4VQQ7_9STRA5.810e-926.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Q9ETY8_SYMMI1.720e-828.96Fibronectin type-III domain-containing protein n=3... [more]
A0A0M0J9H0_9EUKA1.670e-629.28Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A813F1A1_POLGL7.490e-625.82Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2083017..2083754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6717.t1Gvermi6717.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2083017..2083754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6717.t1 ID=Gvermi6717.t1|Name=Gvermi6717.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=246bp
MNCIRADPSFASLGLVFGLVLAGMTPPPSALINFYLKFRELLQEGLKYAQ
VPESSCYMYEPDMIHTTIATFRSFLRPPPSNPELFVSEWKGLLLRASRRS
GWPQPGTYVLTLHEAKVQNNGVGTFLYHDRLRVVDRMRECIRAEMRENKS
QTSLRYIECIRGDVKIPNIIHSTILRWRRSPDISVARLQNIFSEAFVLTK
ATEHPVDIPLTTVSLLREWRPYMMAKTCVVQLWPTKDEDTTESTF*
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