Gvermi6684.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6684.t1
Unique NameGvermi6684.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length400
Homology
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A2V3IXL3_9FLOR (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL3_9FLOR)

HSP 1 Score: 670 bits (1728), Expect = 2.040e-240
Identity = 348/399 (87.22%), Postives = 368/399 (92.23%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESLAGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFHT 399
            MRD  INVP+GFDV+SREAALSAA+S  GKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYD EKAADVA SMIGQ+LVTKQTGEQGRLCSKALVTER+YLRREMYFAITYDRESQGPVI+ASRVGGTSIEDIAA+DPSAITKIPV+M EGLT   AE CA+ALGF  + A+  A DQV KLY LFI+KDATLVEVNPIAETPEG V+CIDAKINFDDNAEFRHK++F MRD SQED REV A   DLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDD KVEAILVNIFGGIMRCDVIAQGIINAAKTIDMR+PVVVRLQGNKVDEAKALI ASGL+LVA+DDLDQAAKKACTLAEIVRLAN+VDV VAF +
Sbjct:   46 MRDAGINVPRGFDVNSREAALSAAKSFDGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDPEKAADVAESMIGQHLVTKQTGEQGRLCSKALVTERMYLRREMYFAITYDRESQGPVIVASRVGGTSIEDIAAADPSAITKIPVNMVEGLTKADAEKCARALGFANQHAIDKAIDQVEKLYSLFIEKDATLVEVNPIAETPEGDVVCIDAKINFDDNAEFRHKEIFSMRDVSQEDPREVTASAHDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDTKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRVPVVVRLQGNKVDEAKALIRASGLKLVATDDLDQAAKKACTLAEIVRLANTVDVTVAFQS 444          
BLAST of Gvermi6684.t1 vs. uniprot
Match: R7QIX1_CHOCR (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIX1_CHOCR)

HSP 1 Score: 612 bits (1578), Expect = 1.280e-217
Identity = 315/401 (78.55%), Postives = 351/401 (87.53%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESLA--GKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFHT 399
            MR   I VP+GFDVDSR AAL+AAE +A  G DIVVKAQVLAGGRGLG FKNGFKGGVH+CY  + AAD A  MIGQ+LVTKQTG  GRLCSKALVTER+YLRREMYFAI YDRESQGPVI+ASRVGGTSIEDIAA+DP+AITK+PVD+  GL+ E A+TCAKALGF G   L+ A  QV KLY++FI+KDATL+E+NP+AET +G V+CIDAKINFDDNAEFRH D+F+ RDTSQED REVRA +FDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG+PANFLDVGGSATE QV EAF ILNDDP VEAILVNIFGGIMRCDVIAQGII+AA  +DMR+PV+VRLQGNKVDEAK LI  SGL+LVASDDLDQAAKKAC LAEIV+LAN+ DV V+F +
Sbjct:   42 MRGAGIAVPRGFDVDSRAAALAAAEEIASTGADIVVKAQVLAGGRGLGAFKNGFKGGVHMCYTPQNAADTAEKMIGQHLVTKQTGADGRLCSKALVTERLYLRREMYFAILYDRESQGPVIVASRVGGTSIEDIAAADPTAITKVPVDIRAGLSKEDAQTCAKALGFEGGEGLEKAVGQVEKLYEMFIEKDATLLEINPLAETSDGDVVCIDAKINFDDNAEFRHADIFEKRDTSQEDPREVRASKFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGSATEEQVMEAFTILNDDPNVEAILVNIFGGIMRCDVIAQGIISAANKLDMRVPVIVRLQGNKVDEAKDLIRNSGLKLVASDDLDQAAKKACKLAEIVKLANAADVKVSFSS 442          
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A7S3A3L8_9RHOD (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3L8_9RHOD)

HSP 1 Score: 563 bits (1451), Expect = 1.990e-198
Identity = 293/398 (73.62%), Postives = 338/398 (84.92%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESLA-GKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAF 397
            MR   I VP+G  V ++E AL+AA+SL  G DIVVKAQVLAGGRGLGTF+NGFK GVH+CYD++ AAD+A  M GQ LVTKQTG  G+LCSK L+TER+Y+RREMY  I YDRESQGP IIASR GGTSIEDIAAS+P AI  IPV+M EG+T E A+  A+A+GF GE+  K  A+QV KLY+LFI+KDATLVE+NP+ ETP+G V+CIDAKINFDDNA+FR  D+F MRDT+QED REVRA E  LNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG+PANFLDVGG AT+ QVTEAF ILNDDPKV+AILVNIFGGIMRCDVIAQGII AAKTI +R+P+VVRLQGNKVDEAK LI  SGL ++A+DDLD+A KKA  LAEIV++AN+VDVNV+F
Sbjct:   34 MRGYGIRVPRGTAVTTKEEALAAAKSLGDGTDIVVKAQVLAGGRGLGTFENGFKSGVHLCYDSKAAADIASKMFGQNLVTKQTGAGGKLCSKVLITERMYMRREMYLGILYDRESQGPTIIASREGGTSIEDIAASNPEAIKNIPVNMAEGITPEVADAVAEAMGFHGESK-KQCAEQVKKLYQLFIEKDATLVEINPMIETPQGEVVCIDAKINFDDNADFRQPDIFAMRDTTQEDPREVRAAEAGLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGNPANFLDVGGGATDKQVTEAFTILNDDPKVQAILVNIFGGIMRCDVIAQGIITAAKTIQLRVPLVVRLQGNKVDEAKKLIFDSGLRIIAADDLDEAGKKAVKLAEIVQIANTVDVNVSF 430          
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A7S1EQ20_9RHOD (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ20_9RHOD)

HSP 1 Score: 547 bits (1410), Expect = 4.680e-192
Identity = 279/398 (70.10%), Postives = 326/398 (81.91%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESLAGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFH 398
            M++ +I VP+G  V S+E AL+AA+ L  +DIVVKAQVLAGGRGLGTF NGFK GVH+C   E AA +AG M+GQ L+TKQTG +GR CS  L+TER+Y+RREMY AITYDRESQGPV++AS  GGTSIEDIA  DPSAI KI +D+   ++NE A T AKALG   +  ++ AA QV +LY LF++KDAT+VEVNP  ETPEG ++ +DAKINFDDNA FR ++L D RDTSQED REVRA   DLNYIGLDGNIGCLVNGAGLAMATMDIIKL+GG PANFLDVGGSA+E QVTEAF +LN+DPKV+AILVNIFGGIMRCDVIAQGIINAAK I+MR+P+VVRLQGNKVDEAK LI  S L +V++DDLD AAKKACTLAEI  LAN + V+V F 
Sbjct:   43 MKEMKIAVPRGTAVSSKEEALAAAKELGSRDIVVKAQVLAGGRGLGTFANGFKSGVHVCESPEDAATIAGKMLGQRLITKQTGAEGRPCSTVLITERLYMRREMYLAITYDRESQGPVVVASSRGGTSIEDIARDDPSAIKKIKLDVNHPMSNETATTVAKALGLRSDETIRKAAYQVQRLYDLFLEKDATMVEVNPFVETPEGDIVSVDAKINFDDNAAFRQRELHDKRDTSQEDPREVRASAADLNYIGLDGNIGCLVNGAGLAMATMDIIKLYGGSPANFLDVGGSASEMQVTEAFTLLNEDPKVQAILVNIFGGIMRCDVIAQGIINAAKVINMRVPLVVRLQGNKVDEAKVLISESKLHIVSADDLDDAAKKACTLAEITHLANEIGVDVQFQ 440          
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A7S1TA51_9RHOD (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TA51_9RHOD)

HSP 1 Score: 538 bits (1386), Expect = 1.800e-188
Identity = 278/400 (69.50%), Postives = 326/400 (81.50%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESL--AGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFH 398
            +R   I VP GF V ++E AL AA+ +   G DIVVKAQVLAGGRGLG F NGFK GVH+CYD EKAA VA SM+G  L+TKQTG +GR CS  L+T+RVY+RREMYFAI YDRESQGPV++AS  GGTSIEDIAA DP+AI KIPV + EG+++E A   A+ALGF     +   ADQV +LY+ F++KDATLVEVNP+AETPEG VI IDAK+NFDDNA FR  D+F MRD SQED REVRA + +LNYIGLDGNIGCLVNGAGLAMATMDIIKL+GG+PANFLDVGG AT+ QVTEAF ILN+DP+VEAILVNIFGGIMRCDVIAQGII AAKTI++R+P+VVRLQGNKV+EAK LI  S L ++++DDLD AA+KAC LA+IV++A   DV V F 
Sbjct:   37 LRSFGIKVPVGFTVRTKEEALDAAKKIHATGSDIVVKAQVLAGGRGLGKFSNGFKSGVHLCYDPEKAAGVATSMLGNRLITKQTGAEGRPCSSVLITQRVYMRREMYFAILYDRESQGPVVVASPRGGTSIEDIAAEDPTAIKKIPVSVREGMSDEVAVEVAQALGFEKPEQVSDCADQVKRLYQFFVEKDATLVEVNPLAETPEGAVIAIDAKVNFDDNASFRQPDVFKMRDISQEDPREVRASKSELNYIGLDGNIGCLVNGAGLAMATMDIIKLYGGNPANFLDVGGGATDQQVTEAFTILNEDPRVEAILVNIFGGIMRCDVIAQGIITAAKTINLRVPLVVRLQGNKVEEAKTLILNSKLRIISADDLDDAARKACKLADIVKMAQDADVGVRFE 436          
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A5J4Z651_PORPP (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z651_PORPP)

HSP 1 Score: 524 bits (1350), Expect = 6.580e-183
Identity = 272/397 (68.51%), Postives = 319/397 (80.35%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESLAGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAF 397
            M++  I VPKG  V ++E AL  A+ L   DIVVKAQVLAGGRGLG+F NGFK GVH+C+  E AA+ AG M+GQ L+TKQTG  GR C+K L+TER+Y+RREMY A  YDRESQGPVI+AS  GGTSIEDIA  DP AI KIP+ +  G+T + A+  A+ALG  G A  + AA+QV  LY LFI+KDAT+VEVNP+ ETP+G V+C+DAKINFDDNA FR +++  +RDT+QED REVRA + DLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVGGSA E QVTEAF ILN+DPKVEAILVNIFGGIMRCDVIAQGIINAA  ++MR+P+VVRLQGNK+ EAK LI  SGL ++A+DDLD AA +AC LAEI  LAN  DV+V F
Sbjct:   49 MKEMGIAVPKGEAVTTKEDALRVAQQLGTNDIVVKAQVLAGGRGLGSFANGFKSGVHVCFTPEDAANKAGKMLGQRLITKQTGAAGRPCAKVLITERLYMRREMYLAFLYDRESQGPVIVASSRGGTSIEDIARDDPDAIVKIPMSIETGMTEKIAQDTAEALGLEG-AVGQAAAEQVKLLYTLFIEKDATMVEVNPLVETPDGKVVCVDAKINFDDNAAFRQQEIHALRDTTQEDPREVRAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGSPANFLDVGGSANEQQVTEAFTILNEDPKVEAILVNIFGGIMRCDVIAQGIINAASVLNMRVPLVVRLQGNKMKEAKQLIEQSGLRIIAADDLDLAASRACKLAEITHLANEADVDVFF 444          
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A1X6NIH4_PORUM (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIH4_PORUM)

HSP 1 Score: 501 bits (1290), Expect = 2.500e-174
Identity = 269/401 (67.08%), Postives = 308/401 (76.81%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDS---REAALSAAESLAG-KDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAF 397
            MR+  + VPK   V S    EAA++   S  G  D+VVKAQVLAGGRGLGTF NGFKGGVH CY    A + A  M+G  LVTKQTG +GR C+  ++ ERVYLRREMYFAI YDRESQGPVI+AS VGGTSIEDIAA+ P AI K+PVD+  GL  E A   A ALGF G+ A   AA QV +LY LF+ KDATL+EVNP+AETP+G V+C+DAKI+FDDNA FR   +F  RDTSQE+ REV A    LNYIGLDGNI C+VNGAGLAMATMDIIKLHGG+PANFLDVGG ATE QVT AF+ILN+DP V AILVNIFGGIMRCDVIAQGIINAAKT+D+R+PVVVRLQGN+VD AKALI  SGL ++A+DDLD AA  A  +A IV LA    V V+F
Sbjct:    1 MREAGVAVPKSVAVTSVADAEAAVATLTSGDGPSDVVVKAQVLAGGRGLGTFTNGFKGGVHTCYTPASAVETAAKMLGGTLVTKQTGARGRPCNTVMLAERVYLRREMYFAILYDRESQGPVIVASAVGGTSIEDIAAATPDAIVKVPVDLAVGLREEDAGRVAAALGFAGDGAAAAAA-QVRRLYDLFLAKDATLLEVNPMAETPDGEVVCLDAKISFDDNAAFRQAPIFAQRDTSQEEPREVAADAAGLNYIGLDGNIACMVNGAGLAMATMDIIKLHGGEPANFLDVGGGATEAQVTSAFRILNEDPAVRAILVNIFGGIMRCDVIAQGIINAAKTLDLRVPVVVRLQGNQVDAAKALIAESGLRIIANDDLDAAASTAVRVARIVDLAAEAKVGVSF 400          
BLAST of Gvermi6684.t1 vs. uniprot
Match: SUCB1_MOUSE (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=12 Tax=Murinae TaxID=39107 RepID=SUCB1_MOUSE)

HSP 1 Score: 459 bits (1181), Expect = 5.460e-157
Identity = 237/398 (59.55%), Postives = 300/398 (75.38%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESLAGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFH 398
            +++  ++VPKGF   S + A + A+ L  KD+V+KAQVLAGGRG GTF +G KGGV I +  E+A  V+  MIGQ L+TKQTGE+GR+C++ LV ER Y RRE YFAIT +R  QGPV+I S  GG +IED+AA +P AI K P+D+ EG+  E A T A+ +GF     + +AA+ + KLY LF+  DAT+VE+NP+ E  +G V+C+DAKINFD N+ +R K +FD++D SQED R+  A   D+NYIGLDG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVGG AT  QVTEAFK++  D KV+AILVNIFGGIMRCDVIAQGI+ A K +++RIPVVVRLQG +VD+AKALI  SGL+++A DDLD+AAK    L+EIV LA    V+V F 
Sbjct:   64 LQEAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSNI-VDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIFDLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVVKLSEIVTLAKEAHVDVKFQ 460          
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A6I9LXF4_PERMB (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=8 Tax=Muroidea TaxID=337687 RepID=A0A6I9LXF4_PERMB)

HSP 1 Score: 458 bits (1178), Expect = 1.550e-156
Identity = 237/398 (59.55%), Postives = 301/398 (75.63%), Query Frame = 0
Query:    1 MRDCEINVPKGFDVDSREAALSAAESLAGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFH 398
            +R+  ++VPKGF   S + A + A+ L  KD+V+KAQVLAGGRG GTF +G KGGV I +  E+A  V+  MIG+ L+TKQTG +GR+C++ LV ER Y RRE YFAIT +R  QGPV++ S  GG +IED+AA +P AI K+PVD+ EG+  E A T A+ +GF     + +AA+ + KLYKLF+  DAT+VE+NP+ E  +G V+C+DAKINFD N+ +R K +FD++D SQED RE  A + DLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVGG AT  QVTEAF+++  D KV++ILVNIFGGIMRCDVIAQGI+ A K +++RIPVVVRLQG +VD+AKALI  S L+++A DDLD+AAK    L+EIV LA    V+V F 
Sbjct:   64 LREAGVSVPKGFVAKSSDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFSSGLKGGVKIVFSPEEAKAVSSQMIGKKLITKQTGAKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLVGSSQGGVNIEDVAAENPDAIIKVPVDIIEGIKKEQAVTLAQKMGFPANI-VDSAAENMIKLYKLFLKYDATMVEINPMVEDADGQVLCMDAKINFDSNSAYRQKKIFDLQDWSQEDEREKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGAPANFLDVGGGATVQQVTEAFRLITSDKKVQSILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSQLKILACDDLDEAAKMVVKLSEIVSLAKEAHVDVKFE 460          
BLAST of Gvermi6684.t1 vs. uniprot
Match: A0A4D5R935_SCOVI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Scolopendridae TaxID=41363 RepID=A0A4D5R935_SCOVI)

HSP 1 Score: 457 bits (1176), Expect = 1.580e-156
Identity = 235/393 (59.80%), Postives = 302/393 (76.84%), Query Frame = 0
Query:    6 INVPKGFDVDSREAALSAAESLAGKDIVVKAQVLAGGRGLGTFKNGFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYLRREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEGLTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAETPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFKILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNKVDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFH 398
            I VP      + E A   A+ L  KD+V+KAQVLAGGRG G FKNG+KGGV + +  E+A D A +M+GQYLVTKQTGE+GR+C+  ++ ER+Y R+E YFA+T +R   GPVIIAS  GG +IE++AA +P AI K  +D+ +G+T++ A + AK LGFT +A  K AA+   K+Y +F+  D++L+E+NP AE  +G + C+DAK+ FDDNAEFR KD+F +RD +QED REV+A EF+LNYI LDG+IGCLVNGAGLAMATMDIIKLHGG+PANFLDVGG AT  QVTEAFKI+  DP+V+AILVNIFGGIMRCDVIA+GII AA+ + M+IP+VVRLQG +VD+AKALI AS L+++A D+LD+AAK    L+ IV LA S  V+V F 
Sbjct:   50 IPVPNFGVATTPEQAYDIAKKLGTKDMVIKAQVLAGGRGKGHFKNGYKGGVKVIFSPEEAKDAASNMLGQYLVTKQTGEKGRICNAVMICERLYQRKEYYFAVTMERSYAGPVIIASAQGGVNIEEVAAENPDAIIKEGIDIMKGITDDQALSVAKQLGFTEKA--KEAAEYFKKIYYMFLKYDSSLIEINPFAEVSDGSIYCLDAKLRFDDNAEFRQKDVFSLRDITQEDEREVQASEFNLNYIALDGDIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGATVKQVTEAFKIITSDPRVQAILVNIFGGIMRCDVIAEGIIVAAEQLKMKIPIVVRLQGTQVDDAKALIAASNLKILACDNLDEAAKMVVRLSTIVGLAKSAQVDVKFE 440          
The following BLAST results are available for this feature:
BLAST of Gvermi6684.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXL3_9FLOR2.040e-24087.22Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
R7QIX1_CHOCR1.280e-21778.55Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3A3L8_9RHOD1.990e-19873.62Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S1EQ20_9RHOD4.680e-19270.10Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S1TA51_9RHOD1.800e-18869.50Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A5J4Z651_PORPP6.580e-18368.51Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A1X6NIH4_PORUM2.500e-17467.08Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
SUCB1_MOUSE5.460e-15759.55Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A6I9LXF4_PERMB1.550e-15659.55Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A4D5R935_SCOVI1.580e-15659.80Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 10..106
e-value: 9.4E-79
score: 266.0
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 237..384
e-value: 2.1E-56
score: 191.9
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 237..382
NoneNo IPR availableGENE3D3.30.470.20coord: 1..231
e-value: 9.4E-79
score: 266.0
NoneNo IPR availablePANTHERPTHR11815:SF10SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT BETA, MITOCHONDRIALcoord: 1..385
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 1..235
IPR005809Succinate--CoA synthetase, beta subunitTIGRFAMTIGR01016TIGR01016coord: 3..382
e-value: 5.5E-124
score: 412.0
IPR005809Succinate--CoA synthetase, beta subunitPIRSFPIRSF001554SucCS_betacoord: 1..384
e-value: 4.1E-136
score: 451.6
IPR005809Succinate--CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 1..385
IPR005809Succinate--CoA synthetase, beta subunitHAMAPMF_00558Succ_CoA_betacoord: 1..383
score: 35.616467
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 2..199
e-value: 3.5E-59
score: 199.8
IPR005811ATP-citrate lyase/succinyl-CoA ligasePFAMPF00549Ligase_CoAcoord: 259..378
e-value: 3.9E-26
score: 91.7
IPR017866Succinyl-CoA synthetase, beta subunit, conserved sitePROSITEPS01217SUCCINYL_COA_LIG_3coord: 254..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1930289..1931488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6684.t1Gvermi6684.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1930289..1931488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6684.t1 ID=Gvermi6684.t1|Name=Gvermi6684.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=400bp
MRDCEINVPKGFDVDSREAALSAAESLAGKDIVVKAQVLAGGRGLGTFKN
GFKGGVHICYDAEKAADVAGSMIGQYLVTKQTGEQGRLCSKALVTERVYL
RREMYFAITYDRESQGPVIIASRVGGTSIEDIAASDPSAITKIPVDMGEG
LTNEGAETCAKALGFTGEAALKTAADQVHKLYKLFIDKDATLVEVNPIAE
TPEGGVICIDAKINFDDNAEFRHKDLFDMRDTSQEDAREVRAHEFDLNYI
GLDGNIGCLVNGAGLAMATMDIIKLHGGDPANFLDVGGSATETQVTEAFK
ILNDDPKVEAILVNIFGGIMRCDVIAQGIINAAKTIDMRIPVVVRLQGNK
VDEAKALIGASGLELVASDDLDQAAKKACTLAEIVRLANSVDVNVAFHT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013815ATP_grasp_subdomain_1
IPR016102Succinyl-CoA_synth-like
IPR005809Succ_CoA_synthase_bsu
IPR013650ATP-grasp_succ-CoA_synth-type
IPR005811CoA_ligase
IPR017866Succ-CoA_synthase_bsu_CS