Gvermi6683.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6683.t2
Unique Name	Gvermi6683.t2
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	118

Homology

[Close]

BLAST of Gvermi6683.t2 vs. uniprot
Match: A0A2V3IXB9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXB9_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 1.800e-13
Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0

Query:   31 NGDFSQLRKLRKMGERRKRTVRFMASVCHDADSLERIALTPKGEQRPPESPPAPAQQQSAEKSQHKPDK--DGRMSIFGIKFGKLHTRR 117
            NGD+ ++R+ RKMGERRK  V F+AS+C +++ LE I+LTPK + +  E  P    ++   + + K +   D R+SIFGI+ GK+HTR+
Sbjct:   45 NGDYKEVREHRKMGERRKTRVHFVASICEESERLESISLTPKRQDQ--EENPCNQGKEELHREEEKGNAAVDKRVSIFGIRIGKVHTRQ 131

The following BLAST results are available for this feature:

BLAST of Gvermi6683.t2 vs. uniprot

BLAST of Gvermi6683.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXB9_9FLOR	1.800e-13	43.82	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_88	contig	ScGOVlb_88:1927750..1930205 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6683.t2	Gvermi6683.t2	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_88 1927750..1930205 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6683.t2 ID=Gvermi6683.t2|Name=Gvermi6683.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=118bp
LLLPRASRFSPPRTQRMSPHRAPHPPRLFVNGDFSQLRKLRKMGERRKRT
VRFMASVCHDADSLERIALTPKGEQRPPESPPAPAQQQSAEKSQHKPDKD
GRMSIFGIKFGKLHTRR*